Syngnathus scovelli (Gulf pipefish): 125969498
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Entry
125969498 CDS
T08785
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125969498 (ccdc50a)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Other autophagy associated proteins
Others
125969498 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
125969498
NCBI-ProteinID:
XP_049577570
LinkDB
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Position
10:complement(6921642..6935644)
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AA seq
622 aa
AA seq
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MAECNVSIDHEKLPGVKEGNVQNTLVTSKHIYTVCRDFAVLEDHCLAYNLQEQEIESHLA
SNVHKSRLVQQDLQVAKKLQEEEDEIAKVVIKKQHVAIERQDNEIAHEIQDQLVRQAEQQ
RRQQEEKDAAIARKIHEKEMKEERRRQKHQDEEYYEDPGVVRQPLDLDKPTRHTSGSPGP
YDVHSPVTSQRDHSPDYNSVEPQRSRHPKQDPPSRSRYPEHLPVAEDGRGRHADHLLSPK
GKSRDRYPDYEPVESRRARDIMGEDPDRAMRRKERPAHPPLSPKGWDRERDTRHDRDVEQ
EHYLRKHQRSDREQEMRTTKGGRDGERSRDRGHDQDRPEVRDKQTHKGKDGQRARARSRE
RALDDDLIELRGDRVSREENEDDAEGMRRARGRQQVQSGPDDVFEEHRNNKGRGDNRELW
EPSGKRTPSSGETGRIVLKGSGAFVEGEYGVGEATRDLTKLDLREQELKDLEVARRMQEE
EVKASKSHVRAAQVAQDEEIARLLMEQEKREYRKHREREKDREEKEREREKERLAMEKMA
VDRRRAEGDYRSNSEDVVRPRTRDEHHEHQKQRNHHKPSRPPHPRTHEYENANPGYGYGD
HAAPQRAPTRPEAAHKGAYYKR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgtaacgtcagcatcgaccatgagaaactacctggagtgaaagagggtaac
gtccagaacacacttgtcacgtctaaacatatttacacagtgtgcagagactttgctgtg
ttggaagaccactgtctcgcctacaacctccaggaacaagagattgagagccacttggcg
tccaacgtccacaagagccggctggtgcagcaggacctgcaggtggccaagaagctgcag
gaggaggaggatgagattgcgaaggtcgtgatcaagaagcagcacgttgccatagagcgc
caagataacgaaattgcccacgaaattcaggatcaactggttcgacaggctgagcaacaa
cgacgacagcaggaggagaaggatgcggctattgctcgtaagatccatgagaaggagatg
aaagaggaacggcgacgacagaaacaccaggatgaagaatactatgaggatccaggagtt
gtgagacagccgcttgacctggacaagcctacacgtcacacatctggctccccaggccct
tatgatgtgcattctccagtgacatcccaacgtgatcattcgccagattataattcggta
gagccacaaaggagcaggcacccgaaacaggatccgcccagccgttctaggtaccccgag
catctcccggtagcggaggacggtcggggaagacatgcagatcacctgttgtcccccaaa
ggcaagagtagggacaggtaccctgattatgaacctgtagaatctagaagagcacgtgac
ataatgggagaggaccctgatagagcgatgagaagaaaggagaggccggctcatcctcca
ctgagtcccaagggctgggacagagagagggacacgagacatgacagagatgtagagcag
gagcattatttgagaaaacaccaaaggtcagacagggagcaggaaatgagaacgacaaaa
ggcggaagagacggggagcgctccagagatcgaggacatgatcaggacaggcctgaagtg
agagacaagcagacgcacaaaggcaaggacggacaacgagcaagggccaggagcagggaa
agggcgcttgacgatgatttaattgagctgaggggggacagagtatcccgggaggaaaat
gaggacgacgcagaggggatgaggagggccaggggccgccagcaggttcaatcgggcccc
gatgatgtgtttgaagagcacaggaacaacaaagggagaggtgacaacagggagttgtgg
gaaccttccggcaagcgtacgccctccagcggcgagacaggtcgaattgtgctcaaaggg
agtggagcatttgtagaaggggagtacggagtcggcgaggccaccagggacctgaccaag
ctggatctgcgtgagcaggaactcaaggacttggaagtggccagaagaatgcaggaggaa
gaagtcaaggcaagcaagagccatgtgcgtgcagcccaagttgcacaagatgaggagatt
gcccggctgctaatggaacaagagaagagggagtacagaaaacatcgagagcgggagaag
gaccgggaggagaaggaacgagaaagggagaaggagcgcttggcaatggagaagatggcg
gtggacaggaggcgagcagaaggggactacaggtcaaattccgaggatgttgtgcgacct
cgaacccgagatgagcatcatgagcaccagaagcaaaggaaccaccacaagccttccagg
ccgcctcatcctcgcacccacgagtatgagaacgcaaacccgggttacggatacggtgac
catgctgctccccaacgggcacccaccagacccgaagcggcgcacaaaggtgcctattac
aagcggtga
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