Syngnathus scovelli (Gulf pipefish): 125969530
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Entry
125969530 CDS
T08785
Name
(RefSeq) ras-related protein Rab-33B
KO
K07920
Ras-related protein Rab-33B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125969530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125969530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125969530
04031 GTP-binding proteins [BR:
sscv04031
]
125969530
Membrane trafficking [BR:
sscv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
125969530
Others
Specific organelles associated proteins
Auto phagosome
125969530
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125969530
GTP-binding proteins [BR:
sscv04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
125969530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
SRPRB
GTP_EFTU
PduV-EutP
G-alpha
AAA_16
Motif
Other DBs
NCBI-GeneID:
125969530
NCBI-ProteinID:
XP_049577664
LinkDB
All DBs
Position
5:13048962..13052191
Genome browser
AA seq
264 aa
AA seq
DB search
MLRRSLRSHYARKVRTSPTQVKASARTMESSLDLSNSLGSVSSLLSGCRTFKVLVIGDSA
VGKTCLTHRLCAGQFPHSAEATIGVDFREIVLDIDGEMIKLQLWDTAGQERFRKSMVQHF
YRNVHAVLFVYDVTCRASFDSLSAWVEECRQNSLGQKVLRFLVGNKSDLRDVVKADGLVS
QDQAKNFAKNHNMVFFETSAKCTSRPRGVGEVPYQRDKVEDVVNAVGARLKRQKNPSVAY
NLAYSGSFKIFNKKTKEKEMWSCC
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgcagtttgcgctcacactatgcaaggaaggtgcggacaagtcccactcaa
gtgaaagcgagcgcgagaactatggagtcctccttggatctgtccaactctttgggcagt
gtgtcgtcgctgctgagcggctgcaggaccttcaaagtgctcgttatcggggactctgcg
gtaggcaagacctgcctcacacaccgactctgcgcgggtcagttcccacacagcgcggag
gctacgatcggcgtggacttccgagagatagttcttgacatcgacggagagatgatcaag
ctccaactgtgggacacagcgggacaagagcgcttccgtaagtctatggtgcaacatttc
taccgcaatgtgcacgcagttctcttcgtgtatgacgtcacctgccgggccagcttcgac
agcctttcggcctgggtagaagagtgcagacagaactctctcggccagaaagtcctcagg
ttcctggttgggaacaagagtgacctccgtgatgtcgttaaggcggatggtctggtgagc
caggatcaggccaagaacttcgccaagaatcacaacatggtgttttttgagacatcagcc
aaatgcacaagtagaccacgcggtgtcggggaggtgccctatcaacgtgataaggtggag
gatgttgtcaatgctgttggtgccagactgaagagacagaagaatcccagtgtggcatat
aacctcgcatacagcggctcttttaaaattttcaataaaaaaacaaaggagaaagaaatg
tggagctgctgctga
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