Syngnathus scovelli (Gulf pipefish): 125969542
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Entry
125969542 CDS
T08785
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 3-like isoform X1
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125969542
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125969542
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125969542
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125969542
Intermediate filaments
Intermediate filament-binding proteins
125969542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
DUF948
Motif
Other DBs
NCBI-GeneID:
125969542
NCBI-ProteinID:
XP_049577679
LinkDB
All DBs
Position
5:3330646..3341161
Genome browser
AA seq
1564 aa
AA seq
DB search
MEYSLKSIHFSPSSSNSSSPFYRRSVRLSAAMVDSGPGEATSTKKPFSVLEIPPLDQFDF
GRAKIRANVRWLLCKSYGCAENVPVEMREPLYKDQYDQEHLKPAISELLLSPEIYCKAQA
LLLQTPGGPSASQNSPSDHCALLQFLTKKGVAPQVQDVDVTEDDLRCTPIKMKAHLALMD
SMISLAAREIVDRVKMPAGAEQMGVGAPWENALLFWVNRLNQKLKESTEEEETPQRSQQN
TDVQASQETGPPTRWYWKLVPHAIAFCLKESGNKPPVIRYRKDKVQSKLTPTFPLVSAVK
DLSNGCAIAAVLHFYCPGLLPLEDVCLKDTMSVADSLYNLHLIKELCESSLQSCCLLSPE
DLLYAPPLLHLNIMSFVAELLEWFEVKKPDFVQPIQSIDLTDVSSLAFCTSPVSGNSNSG
SPSYIFKHPFVTVPSPLSPENKTWTKKQISHPLSSATFSIPFGLDSDVDIVMGNPIDSVF
RSASTDSLGTSIPATTTLAGITRIPYSSPVSASAPSQRSSWGPYMHPAPLGELPTVEEAL
QVPPGAKDRNKGRTAVKDVLTARPESRLCPEGAPAVFFLHSPLEDNSQLSHSAPCRSGVI
YRPVCGEASNNGGRGERKARQTNGAARDDDSSEAFDDTPRNAPGNMRPGKSHQGDYSPRM
TSFAEKRDGKRRHTVASGEDFSTTPTATTPGTPLTPCTPAGTQSQKVNPGFKVPETGSED
WELGARLEEKRKSIEAQKRRIEAIFVKHRQRLGKTAFLKMKREQGEGGGEGADEDNVSLE
ERLARIEEQLKREEEKEKTEKEVEKEKAKPSISNAPRLEKQVTFSIDSKKGQEQEKGPEK
VGGGMLVEYNEIVQKLSEALQSLQKDMHKLTEQQQELLGNQRPRSSQKVTAKSRPKSNTK
APAKTPPATPTKTPPRTPTKSTSKAWMIPNGSKTSSVSPSSRRTNPLSAATSPKTMVSSS
CPAPRTKIHISSTPRSPKHHPRPQAHPRPSELKFPPLNRVLTPTRTVDTLPHLRRVSPSK
CQVQTTSSFRIGGLPEISQPAPQPHHSTSDTASCETPTQFSLELEQDDAEAAVVPVPPPP
RATSGSSSGAPSECSFESETLSISAAYSTERDGAKAAERHCGIIEVSLSSLGEAEGGTDE
PTDEGRDFSSDSMSDQLESAVEPAVINSDSPEQLDSATEAGNSSDQQTESSHADAAEPLG
ENELGARGGIGFYFKEDVENEDEMSQRKALLLERQQRRAEELKRRRQEQEHEKIMESSNK
TASSPSNTPRVGKISPCPTSPATPVRRGGFTRAEYARRQQLRIMDDLDKMLQQKKSTNLG
RSPVKKTRPPRPRSVTREETQLSLSPAKKATVPKLTKSHSSLNLAAGDNDGDKEVQRKPD
LPAGSATPSGLANQNGDWDAGSNGTSPALEHTGLKLFKEPSFKSNKFIIHNALSRCCLAG
KVNEPQKNKIVEEMEKSPANHFLILFRDVNCQFRGVYTANPDSAELVRLTGVGPKTVSST
QVESMYKYSSDRKQFSAIPSKTLGMSVDAFTIPGYLWHAGGAAATGGGGGSSRRASLAKT
LVSK
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggagtattcattgaagagtattcatttctctccatcctcttccaactcctcctcccct
ttttatcggcgctccgtgcgcctcagcgcggccatggtagactccggacccggcgaagct
acgtcgacgaagaagcccttttcggtcctggagattccccctctggaccagttcgacttc
ggccgcgccaagatccgcgccaacgtgcgttggctgctgtgcaagtcgtacggctgtgca
gagaatgtgccagtggagatgcgggagccactctacaaggaccagtatgaccaagagcac
ctcaagccggccatctccgagctcctcctctccccggagatctactgcaaagctcaggcc
ctgctgctccagacccctgggggcccctcggcctcgcagaactcaccctctgaccactgc
gctctgcttcagtttcttactaagaaaggtgtggccccgcaggtccaggatgtggacgtc
acagaggacgacctcagatgcacccccatcaagatgaaagcccacctggccttgatggac
tccatgatatcactggccgcccgggagatcgtggacagggtaaaaatgcctgccggggct
gaacagatgggcgtcggagcgccttgggagaacgcgctgctcttctgggtcaacagattg
aaccagaagctgaaggaaagcaccgaggaagaagagacgccccagcggtcgcagcagaac
accgatgtccaagcctctcaggaaacgggcccgccaactcgttggtactggaagcttgtc
cctcatgctatcgctttttgtttgaaggagtcggggaacaaacctccagtgattcgctac
aggaaggacaaagtgcagtccaagctgactcccaccttccccttggtcagcgcggtcaaa
gatctgtctaatggctgcgctatagctgctgtgctgcatttctattgcccagggttgctg
cctctagaggatgtatgtctgaaggacaccatgtcagtggccgacagtctttacaacctg
cacctgattaaagagctttgtgagagcagtttgcagagctgctgccttctttccccggaa
gatcttctctatgctccacctcttttgcatctgaacatcatgagctttgtagctgagctg
ctggagtggtttgaggtcaagaaacccgattttgtgcaaccgatacaaagcattgacctg
accgatgtctctagtttagcgttctgtaccagtcctgttagtggaaacagcaacagcggg
tctccttcgtacatcttcaaacacccttttgtgaccgtcccttctccactatcacctgaa
aacaaaacctggacaaagaaacaaataagtcatcctctgtcctcagcgactttcagcatc
ccatttgggctggacagtgatgttgatattgtcatgggcaacccgatagattctgtcttt
cgctctgccagcacggacagcctgggcaccagcatccccgcaacgaccacgctggcggga
ataactcgcataccgtacagctccccggttagcgcttcagcgccgtcgcagcggtcttct
tgggggccttatatgcacccagcgcccctgggagagctgcccactgtcgaggaagcgtta
caggtgcctcctggcgcgaaagatcgaaacaaaggaaggactgcagtgaaagatgttttg
acggcaagaccggaatcgaggttatgtcccgagggcgcccctgctgtttttttcctgcac
tccccattggaggacaattctcagctcagtcattctgccccctgccgctcgggagtcatt
tatcgaccggtttgcggagaggcgagtaataacggcggtagaggggagaggaaggcgagg
cagacgaatggtgcggcacgtgacgatgattcatcagaagcgtttgatgacacccccaga
aatgcccctggtaatatgcgacctggtaaaagtcatcaaggagactacagcccacgcatg
acaagctttgcagagaaacgggacggcaaaagaagacataccgtagcttccggcgaagac
ttttccactaccccgacagcaaccacgcccggaacgccgctcactccctgcacaccagca
ggaactcagagtcagaaggtcaacccgggcttcaaagttcccgagacgggttccgaggac
tgggagctgggagctcgtctggaggaaaaacgcaaaagcatcgaagctcaaaagagacga
atcgaggccatctttgtcaagcacagacagaggctcggaaaaacagctttcctcaaaatg
aaacgagaacaaggtgagggagggggagagggagcggatgaggacaacgtctctctggag
gagcgcctcgctcgcattgaggagcagctgaaaagggaggaagagaaggaaaagacagaa
aaggaggtagagaaggagaaagccaagccatccatctccaacgctccacggctggagaag
caggtcaccttctctattgacagcaaaaaaggacaagagcaagaaaaaggaccagagaaa
gtaggcggcggcatgttggtggagtataatgaaattgtccaaaaactgagtgaagctttg
cagtcactgcagaaggacatgcataaactaactgaacagcagcaggagcttctaggaaac
caaagaccaagaagctcccaaaaagtcaccgcaaagtcaagacccaaaagtaacaccaag
gcgcctgccaaaacccctccggccacacccacaaagacacccccaagaacccctaccaag
agcaccagcaaagcctggatgattccaaacggctccaaaacctcttctgtgtctccatcg
tcccgacggacaaaccctctctctgcagctacttcgccaaaaacaatggtctcctcctcc
tgtcctgctccccgcaccaaaatccacatctcttccacccctcgcagtcccaagcaccac
ccaagaccgcaagcccatccacgaccatcagagctcaagttcccccctctcaatcgtgtt
ttaactccaactcgcactgtggataccctcccccacttgcgaagagtgtcgcccagcaag
tgtcaagtgcagacaacgtcgtccttccgcatcggcggacttccggaaatttctcagcct
gcgccgcaaccccaccatagcacttcggatacggcgtcttgcgagacacccacccagttt
agcctggagctggagcaggacgatgccgaggcagccgtcgtgcccgtgccgcctcccccg
agggccaccagcggcagcagctccggtgctccttccgaatgctcttttgagagcgagact
ttatccatttccgccgcatacagcaccgaacgagacggagcgaaagctgccgagaggcat
tgcggtatcattgaggtgtcgctgtcctcccttggagaagcggagggaggcactgatgaa
cctacagatgaagggcgggatttttcgtccgactccatgagtgaccaactcgaatctgcg
gtggagcctgccgtaatcaattccgacagcccggagcagttggattcagccacagaagcg
gggaactcttcagaccaacaaacggaatccagtcacgccgacgctgcagaaccactcgga
gaaaatgagcttggagcccgaggagggatcggattctactttaaggaggatgtggagaac
gaggacgaaatgtcccagcggaaggctctgcttttggagcggcagcaaaggagagctgag
gagctgaagaggaggcgacaagagcaagaacatgaaaaaataatggaatcctccaacaag
actgcttcctctccttccaacacaccccgtgttggaaaaatctcgccctgtcccacttct
cccgccactccagtccggcgtggaggtttcacgcgagccgaatacgcccgccgacagcag
ctccggattatggacgacctggataagatgctgcagcagaagaagtccaccaacctgggt
cgatcgcctgtcaagaagacaaggccaccacggcctcgcagcgtcaccagggaggaaacc
cagctgtccctgagccccgccaagaaagccactgtccccaagttgaccaagtctcactcg
tccctcaacctggcagcaggagacaatgatggggataaggaagtccaaaggaaaccggat
ttgcctgccggaagcgcgacgccaagcggacttgcgaaccagaacggagactgggatgcc
ggttccaatggaacctcaccagccctggaacacacaggtctgaagctcttcaaagagcca
agcttcaagtccaataaattcatcatccacaacgctctgtctcgttgctgcttggccggg
aaggtcaacgagccccagaagaacaagattgtcgaggagatggagaagagccccgccaac
cacttccttatcctcttccgggacgtcaactgccagttccgcggcgtctacacggccaac
cccgattcagcggagcttgtgcgcttgaccggcgtgggccccaaaacggtaagctcgacc
caagtggagtccatgtacaagtacagctcagaccggaagcaattcagcgccatcccctca
aagaccttgggcatgagcgtggacgcattcaccatccctggatacctgtggcacgctgga
ggggcagcggctacgggtggggggggaggaagcagcagacgggcgagcttggcaaagacg
ctcgtttccaagtga
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integrated database retrieval system
