Syngnathus scovelli (Gulf pipefish): 125969575
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Entry
125969575 CDS
T08785
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04081
Hormone signaling
sscv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125969575 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
125969575 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
125969575
NCBI-ProteinID:
XP_049577756
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Position
5:complement(2216791..2224766)
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AA seq
460 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSSCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEYPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHTMLPRFRNPLQQNEPHMPQNATFPESFAQA
NPVPFPHSPGNSSNATFPHSPSSSDPGSPFQMPETPPPAYMPPEEQMTQDCPLPMDTNLM
APPLPIEANNRGVDVQPVAYEEPKHWCSIVYYELNNRVGEAFQASSTSVLVDGFTDPSNN
RNRFCLGLLSNVNRNSTIESARRHIVKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHG
FHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYH
RQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacttcgctcttctccttcaccagcccggccgtcaagcgcctgctgggctgg
aagcaaggcgatgaggaggagaagtgggccgaaaaggcggtggacgccctggtgaagaag
ctgaagaagaagaagggcgccatggaagagctggagcgggcgctcagctgtcccggtcag
cccagcagctgcgtcaccatcccccgctccctggacggccgtctgcaggtgtcccacagg
aaagggctacctcacgtcatctactgccgcgtgtggcgctggcccgacctgcagtcccac
cacgagctcaaggcgctggagtgctgcgagtatcccttcggctccaagcagaaggacgtc
tgcatcaacccgtaccactacaaacgggtggacagcccagtgctgccccctgtgttggta
ccgcgcaacagtgagttcaacgccaagcacacgatgctgcctcgcttccgcaacccgctg
cagcagaacgagccgcacatgccccagaacgccaccttccccgagtccttcgctcaggcc
aaccctgtgcccttcccccactcgcccggaaacagcagcaacgccactttcccgcattcg
ccgtccagctccgaccccggcagccccttccagatgccggagaccccccctcctgcctac
atgccaccggaggagcagatgactcaagactgccccctgccgatggacaccaacctcatg
gcgccacctttgccgattgaggctaacaaccggggagtggatgtgcagcccgtggcctac
gaggagcccaagcactggtgctccatcgtttactacgagctcaacaaccgcgtcggcgag
gccttccaggcctcgtccaccagcgtgctggtcgacggcttcaccgatccctccaacaac
cgcaaccgcttttgcctgggtctgctctccaacgtcaaccgcaactccaccatcgagagc
gcccggcggcacatcgtcaaaggcgtccacttgtattacgtcggcggcgaggtctacgct
gagtgcctgagcgacagcagcatcttcgtccagagccgcaactgcaacttccaccacggc
ttccatcccaccaccgtctgcaagatccccagcggctgcagcctgaagatcttcaacaac
caggagttcgccgagctgctggcccagtcggtcaaccacggcttcgaggctgtctacgag
ctcaccaagatgtgcaccatccgcatgagcttcgtcaagggctggggtgccgagtaccac
cgccaggatgtgaccagcaccccctgctggatcgagatccacctccacggtcccctgcag
tggttggacaaggtgctaacgcagatgggctccccccacaaccccatatcatccgtgtcc
tag
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