Syngnathus scovelli (Gulf pipefish): 125970074
Help
Entry
125970074 CDS
T08785
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125970074
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125970074
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125970074
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125970074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
PTP_tm
FN3_Tor_3rd
Ig_ILCR1
Tc-R-P
Interfer-bind
PTP-SAK
DSPc
PTP-NADK
Y_phosphatase3
Glyco_hydro_66
Motif
Other DBs
NCBI-GeneID:
125970074
NCBI-ProteinID:
XP_049577980
LinkDB
All DBs
Position
6:complement(5931196..5942698)
Genome browser
AA seq
2293 aa
AA seq
DB search
MDALLLLLGFLMTTCATDQSSTLGHSSRTQESLAVTRSTSGSPTASPFQHVTFGLVSPRS
TVTPDHSNATPSDWPQMTKMITSETPLLLASDWPQTSKTISSHIPPSTGSDWQRTSKSIM
SEISQSAAFNWPQTSKMTMSETPHPAVSDWPQTSETTSEATSETTSEMSEITSETEATSE
MMSEMTSETMSEMMSEMMSETMSEATSEMTSRTTSETTSETRSETTSEARSETTSETTSE
TTSETTSEARSETTSEATSEMRSEATSEISPPATSEWQQTSGTITSKTPPPTVSDSPETS
KMPTSVSDWLQTSKKLMSETQPAAFSRPKTSEMATSETPLPVTSDWPQTSKTITSKTSDQ
SDWKQTSTILTSETQVLTGSDWPQTSQPITSETPPPAVSDWQQTTKVIISETLPSDRPQT
SKTAPPPFSLSDEALVSSEVTTKMTFSISAVTSANRGTPATSDSTPADPGRPTSPGSSPI
GSTHRNTAASNPTRTRAGTPASLVVSTPSLPAASSPASATSPTSVLFAPTSRPATSSAPP
TSPAGHALVTIAMTTSSPAATGPKVNSPNWPGCSVTFGKVKVGVNWALLTVNPQNLCGNF
TATAAAWRSSHVSVSECQPVAAAALNFTCAVTGLRAGSAYRVSVASALHGPLGQVQVRTA
PDAVSALSAMSLSNGTTLRLAWTPPSGDWEKYGVLLRNGSEVLVNDSVGKMNREYVLSAG
ELGLVPGRLYGAEVKVHSGMLANTARCQARLAPRPVQELCVYRVDESSVNLRWRPPRGEW
DSFTTVIDAARPDSAAVQKLLPREATGCAFSELTSGRLYTVTVTTTSGNLSSSASINLWT
TPSQVSGLQVRNLGSTESLLAEWEQASGEVDLYLVLLLHEGSVIKNQSVPAEDTILSFRD
LRPGALYGVVVTTVRVGLRSRQTVAEGRTVPAAVSEVTVSNNGRVDFLSVSWHPALGEVD
SYLVALRDRDKTLHTLVVSKSSHQCDFSSLVSGRLYNISISTSSGSLRNQTSVLERTQPS
KVQDPTAIHGARDDFLKVYWRPASGDFDFYRVAITHDNTVLQNQTVSRLRNECVFHGLVP
GRLYTVVVGTRSGSYEASASTHARTFPAAVRSLHVGRRTSQELWVLWTAAPGDVDHYEVQ
LLFNDMKVFPPLTLGGAVTECQVTSLTPGRLYKVLVSTFSGPNQRTQFIEGRTVPSQVKN
IQVTNGGDSSSLTVSWTPGQGDVDRYVVVLYRQNHQLDARHLLRHQNQVEFGSLQPGQLY
CVTVQALSGDLFSNQTASARTVPSAVTALRVENPVGTGSLTATWREAAGVSDGYFLQLFD
ERGAVLGNATLTTALTRHTFDHLSPGRQYKVLVRTTSGGVQSLGAAAQARTRPAAATQLS
IQSNTSTALAFCWSRPAGDLDSYEVLLYGADEVLRERRQVGPSGLACSFQGLTPGSAYKM
VVVTRSGQLSNSSSIWAGTVPSAVTSLRAQGGHGCDQLQVLWRRGQGGVSGYLVSLSTPN
GSVRAQEHLGSEVSQFVFNGLKPGRLYRVDVLSLSGDLANAASMHARTAPRPPSSFLFRG
VTNTSLDLTWSVPPDSDYDDFEVRWTPGDRGSVVNPYENRRSGSRIVRGMFPGRLYNFSL
RTVSGSSQGGGEAPPSYSLPIWGSIRTKPSPVVGLRCRPQSSTSVSCSWVPPESDFDSYV
VECAREDSQSLVYSRRLDRRLDRRPEGRPAAYVIDLLEPHKRYSVRVKVISDTSASEAAQ
DGVLTMIDRPPVPDVGTRVDAASARATRSSILFHFNCSWFSDINGAVKFFSVVVTESKGE
DRVLPEQRHPLPSYADYMSNTSIKSYQTSLFPAAPGSAEACAYDIIVGAGTEVLGGSCEP
THARRHLQRFCDGPLKATTAYRLSVRAFTQVPDGFSPPLYADTFLSLPVRTTTDPAGALV
GGIIVTVFLMVALAMLVTLIVYRRHARPKIVQESVSVNMGLRRDRPLPRNHLGLRGCRKP
CHMTSPVKVADFERHYNKLQADAHFLLSEQYESLKDIGRNQSTDAALLPDNRGKNRYNNI
LPYDATRVKLSYVDDELCSDYINASYIPGNNSRREYIATQGPLPGTKDDFWKMVWEQNVR
NVVMLTQCVEKGRVKCDRYWPAEREPLYYGDLIVHMTSESVLPEWTIREFNVCSEDDIRR
VHTVRHFHFTVWPDHGVPDGTQSLVHFVRTVRDFVNRSGAGGPTIVHCSAGVGRTGTLVA
LDRLLQELDSSDTLDIYGCVWQLRLHRSHMLQTERQYAFVHQCIRDVLRARNLIVYENVG
LSQADAVRATLIS
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcttctacttctactaggcttcttgatgaccacttgtgcgactgaccaaagt
tcaaccttagggcattcctcaaggacacaggaaagtttagcggtgacaaggtcaacttca
ggttcacccactgcttcaccattccaacatgtgacctttggccttgtatctccgaggtcc
acagtgacgcctgatcactcaaatgcaacaccgtcagattggccgcaaatgacaaagatg
ataacgtcagagactccccttctgctagcgtctgattggccacaaacatcaaagacaata
tcctcccacattccaccttcaactggatctgattggcagcgaacgtcaaagtcgataatg
tcagagatttcacagtcggctgcattcaactggccacaaacgtcaaagatgacaatgtcg
gagactccgcatccggctgtgtctgattggccacaaacatcagagacgacgtcagaggcg
acgtcagagacgacatcagagatgtcagagataacgtcagagacagaggcaacatcagag
atgatgtcagagatgacgtcagagacgatgtcagagatgatgtcagagatgatgtcagag
acgatgtcagaggcgacctcagagatgacctcaaggacgacctcagagacgacctcagag
acgaggtcagagacgacgtcagaggcgaggtcagagacaacgtcagagacgacctcagag
acgacctcagagacgacgtcagaggcgagatcagagacaacatcagaggcgacgtcagag
atgaggtcagaggcaacatcagagatttcgcctccggccacgtcagaatggcagcaaacg
tcagggacaataacgtcaaagactccacctcccaccgtgtctgattcgccagaaacgtca
aagatgccaacgtctgtgtctgattggctgcagacatcaaagaagttaatgtcggagact
cagccggccgcatttagtagaccgaaaacatcagagatggcaacgtcagagactccactt
ccggtcacgtctgattggccacaaacgtccaagacgataacatccaagacttcagaccaa
tctgattggaagcaaacatccaccattttaacatcagagacccaggttcttaccggttct
gattggccacaaacgtcacagcccataacgtcagagactccgcctccggccgtgtctgat
tggcagcaaacaacaaaggtgataatatcggagacattgccttctgaccggccacaaact
tcaaaaacagcgccgcctccattcagcttatcagatgaggcacttgtgtcaagtgaggtc
acaacaaagatgacattcagcatctccgccgtgacgtcagcgaaccgaggcacccctgcc
acgtctgactccactcctgccgatcccggtcgtcccacctcccctggcagcagcccgatt
ggctcaactcatcgcaacaccgctgcaagcaatcccacccggactcgggccggcacccct
gcctcccttgtcgttagcactcccagccttcctgcggcctccagccccgcttctgccacc
tcgcccacctcagttctgttcgctcccacaagcaggccagcgacatcttcagccccgccc
acaagcccggcaggccatgcattggtaacgattgccatgacaacaagcagtcccgcagca
accggtccaaaggtcaactcgcccaattggcctggctgctcagtgaccttcgggaaggtg
aaggtcggcgtaaattgggcgctgctgacggtcaacccgcaaaatttgtgcggcaacttc
acagcaacggcggcggcctggcgcagcagccacgttagcgtgagtgagtgccagccggtg
gcggccgctgccctaaacttcacctgcgccgtcacaggattgcgggcgggaagcgcgtac
cgcgtcagcgtcgcctcggccctacacggaccactgggacaagtgcaggtgcgcacagct
cccgatgcggtgtcggcgttgtcggccatgtcgctttctaatggcaccacgttacgtctg
gcctggacgccccccagtggcgactgggagaagtacggtgtgctgctgcgtaacggctcg
gaagttctggtcaacgacagcgtcggcaagatgaaccgggaatacgtattgtccgccggc
gagttgggtctggtgccgggccgcctctacggcgccgaggtcaaggtgcacagcggcatg
ctagcgaacacggcgcgttgccaagcacgactggcccccaggcccgttcaggagctttgc
gtctatcgtgtggacgagtcgtctgtaaacctccggtggcgcccaccgcgaggcgagtgg
gatagcttcacgacggtcatcgacgcggcccggcccgactcggctgctgtccagaagctc
ctcccccgggaggccaccggctgcgcctttagcgagcttacctcgggacgtctgtatacc
gtcaccgtgacaactaccagcggcaacctgagtagctccgcctccatcaacttgtggacc
actccgtctcaggtgagcggactacaggttcgtaatttgggaagcaccgagagcctcctg
gctgagtgggagcaggccagcggggaggtggacttgtacctagtcttgctgctccacgag
gggagcgtcatcaagaaccaaagcgtgccggccgaggacaccattctgagtttccgtgac
ctgaggcccggcgccctctacggggtggtggtgacgacggtccgagtaggactccggtcc
aggcagacggtggcggagggccgcaccgttcccgctgctgtcagcgaggtgacggtcagc
aacaacggacgcgtggacttccttagcgtgtcctggcatcccgctttgggggaggtggac
agctatctggtggctctcagggaccgtgacaagacgcttcacacgctggtggtctccaaa
agcagtcaccagtgcgattttagctccctggtatcaggacgcctctacaacatctccatc
agcacctccagcggaagcctccgcaaccaaacctccgtcctggagaggacccaaccgtcc
aaggtccaggaccccaccgcgatccacggcgcccgtgacgactttctgaaggtgtactgg
cgtcccgcctccggagactttgacttctaccgcgtcgccattacgcacgacaacacggtg
ctgcagaaccagacggtgtccaggttgcgcaacgagtgcgtctttcacggcttggtccca
ggacgactctacacggtggtggtcggcacacgcagcggcagctacgaggccagcgcctcc
acccacgctcgcaccttccctgcggcggtgcgttccttgcacgtgggccgtcggacctcg
caggagctttgggtgttgtggacggcggccccgggcgacgtggaccactacgaggtgcag
ctgctcttcaacgacatgaaggtgttccctccgctcaccctgggcggcgctgtgactgag
tgccaggtcacctcactcacgcccggacgactctacaaagtcttggtgtccaccttcagc
ggacccaaccagaggacccagttcatcgagggccgcaccgttcccagccaggtgaagaac
atccaggtgaccaacggcggcgacagcagtagcttgacggtgagctggaccccgggccaa
ggcgacgtggaccgatacgtggtggttctgtacagacagaaccatcagctggacgcacgg
cacctgctcagacatcagaatcaggtcgagtttggctcgctccagccgggtcagctgtac
tgcgtgacggttcaggcgctgagtggtgacctgttcagcaaccaaacggccagcgcacgc
acagttccgtcggcagtcacggcgctgcgggtggagaacccggttggtaccggcagcctg
acggcgacctggcgggaagcggcgggcgtgtcggacggctacttcctgcagctttttgac
gaacgaggcgccgtccttggcaacgccacgctgacgaccgccctcacgcgccacaccttt
gaccatctcagcccagggaggcagtacaaggtcctggtccggaccaccagcgggggagtc
caaagcctcggggccgccgcccaggcccgcacacgtccggcagccgccacccagctgtcc
atccaaagcaacaccagcaccgctctagccttctgctggtcccggccggcgggagacttg
gactcgtacgaggttctcctgtacggcgccgacgaggttctgcgggagcggcgtcaggtc
gggccttccggtctggcctgctccttccaaggactcacgcctggttctgcttacaagatg
gtggtggttacgcgcagcggacaattgagcaacagctccagcatttgggctggcacagtc
ccgtccgccgtcacgtctctgcgtgcccaaggcggccatggttgcgaccagctgcaggtc
ttgtggcggcggggccagggcggcgtgtcggggtacctggtctcgctttccacccccaac
ggctcggtgcgggcacaggagcatctgggctctgaggtcagccaattcgttttcaacggc
ctgaagccaggtcggctttaccgcgttgacgtcctgagcctcagcggcgatctcgccaac
gccgccagcatgcatgcaaggacagctccccgaccgcccagctccttcctcttccgaggg
gtgaccaatacgtccctggacctcacctggagtgtccccccggactcggattacgacgat
tttgaggtgcgctggacgccgggcgaccgcggctccgtggtcaacccgtacgagaatcgc
cgatccgggagtcgcatcgtgagagggatgttccccggacgcctctacaacttcagcctg
cgcacggtcagcggaagctcgcagggagggggcgaggccccgccctcctacagcctgccc
atctggggcagcatccgcaccaagccgtcccccgtggtcggcctgcgctgccgccctcag
agctccacgtccgtctcctgctcctgggtgcccccggaatccgactttgactcctacgtg
gtggagtgcgctcgtgaggactcgcagagtctggtctactcgcggcgtttggatcggcgt
ttggatcggcgcccggaggggcgtccggccgcgtacgtcatcgacctgctggagcctcac
aagcgctacagcgtgcgcgtcaaagtcatctcggacaccagcgccagcgaggcggcgcag
gacggcgtgctcaccatgatcgaccgccccccggtgccggacgtcggcacgcgagtggac
gctgcctcggcccgggcgacccgttcgtccatcctgttccacttcaactgcagctggttc
agcgacatcaacggcgccgtcaaattcttcagcgtagtcgtcactgagtccaaaggtgaa
gaccgcgttcttcccgagcagcgccaccctctgccctcgtacgccgactacatgtccaac
acgtccatcaagtcgtaccagacgtcgttgtttcccgctgcccccggctcggctgaagcc
tgcgcttatgacatcatcgtgggggccgggacggaggtcttgggggggtcgtgtgagccc
acacacgcacggcgccacctgcaacgcttctgcgacggacccctcaaagccacgaccgct
tacaggctgagtgtgcgagcgttcacgcaagttcctgatggcttttcgccgcctctttac
gccgacaccttcctgtcgctacctgtgcgcaccacaacagaccccgccggcgccctggta
ggaggaatcattgtcaccgtcttcttgatggttgcgttggcgatgctggtgacgctcatc
gtatacaggcgacacgcgcgacccaaaattgtgcaggaaagcgtgtcggtcaatatgggt
ttgaggagggaccgacctttgccaagaaatcatctggggctcagaggttgcaggaagccc
tgtcacatgacaagccccgtcaaggtggccgactttgaacggcactacaacaagctccag
gctgacgcccacttcctgctttccgagcagtacgagagtctgaaggacatcgggcgcaac
cagagcacggacgccgctctgctgcccgacaaccgtggcaagaaccgatacaacaacatc
ctgccctatgacgctacgagagtcaagttgtcctacgtggatgacgaactttgctccgac
tacatcaatgccagttacatacctggcaacaattcccgccgcgagtacatcgccacccag
gggccgctgccgggaaccaaagatgatttctggaagatggtctgggagcaaaatgtccgc
aacgtagtcatgctcacgcagtgtgtggagaaaggacgcgtgaagtgcgaccgctactgg
ccggcagaacgggagcccctctactacggagaccttatcgtccacatgacctccgagtcg
gtgctgcccgagtggaccatacgagaattcaacgtgtgcagcgaggacgacatacggcgc
gtgcacacggttcgtcatttccacttcactgtgtggcccgatcacggcgttcctgacggc
acgcagtcgctggtccactttgtccgtaccgtcagagactttgtcaaccggagcggcgcc
ggaggacccaccattgtgcactgcagcgccggagtgggccggacggggaccttggtggca
ctggaccgcctcctgcaggagttggactcgtcggacacgctggacatctacggctgcgtc
tggcaattgcgcctccaccgctcacacatgctgcagaccgagcgtcagtacgcctttgtg
catcagtgcatcagggacgtgctgcgagccaggaacttgattgtgtatgaaaacgtcggc
ttgagccaggcagacgctgtacgggcgacattaatatcataa
DBGET
integrated database retrieval system
