Syngnathus scovelli (Gulf pipefish): 125970078
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Entry
125970078 CDS
T08785
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125970078
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Other basic domains
RF-X
125970078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
125970078
NCBI-ProteinID:
XP_049577989
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All DBs
Position
6:complement(6607407..6621019)
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AA seq
1461 aa
AA seq
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MADDQQQADQKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEKF
TDIEKLYLYLKLPSGPSSGNDKSFPISIHHPNPQIVPNWTENERGSSTPGLCEQSSMSSS
RTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNM
KARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLQKSGDGCELMEPAGQSPSAEDEMRSA
ACGLVCEWAQKVLSRQFDNVEELARFLLNSHYIGTKSMAALTVMTGTPTTGMKTPTPASA
FVPTAEANSFQPQVKTLPSPSVDAKQQLQRKIQKKQQEQKLHSPLPNDAQVKRTEASTPG
PSIPCGSPALLSPQPTIGIVVAAVPSPVTVQRSRQLMTSPSPVGTTEGKVLPVNLVVTQS
LKQSSKTPQNIPASPVGDRLARHSTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMP
TPHVSSVNVVKMTAIALAPSSSGTTTSSSTVVRSASAGMGPTSALDESQGASLTAAVRAV
ASGLTSSADIKASEAATYNSAEKTAMAASEERVAKFRAASEPSFPVKCSPGPDKVLRMRS
DSVSLSTSVAVAGIQDSNNSNCLDNTLYLTVDNHNSAGNMSTSGSSISIPASKDSCIDVK
SPRKRTGPTGESHVIPVKRVFISQQLPAAAVDNPKPGISAAVKRIPRPGTPARPESAPCK
VTAKPVSVGPTQILALSDSPIAHIRGSPTLVKPQALMVKQDAEVSGEAAGMSDQVFLQQI
TADTRAIPNNSGAHNAAVMSELNSTIWEEGQLDELRKHSQISAEHKQAVTEQLSLIAQPL
DTPGQLALAQEMVDFSGAQPNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKSLFGSCVDV
SLQGQPASNQNSALNAHQAGTAFYHSTHSSTTPVQTPTPTPTPTPTPTPTSEMTLSHSLT
RESPCSRMAPITPVDGALGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITAYHD
ASIVSSSPVKPMQRPMATHPDKAKLEWINNRYNSNSAGPLSNHSIGLLPSYQDLVDDQFR
KPHAFAIPGQSFQAQSRPDSTHFGSLAPISPVQQQVTTATTPTKQESFAVPAPLDNKTPS
SSASGTFRCRSVSPAVRQRNSSGNTGPQTTTAAASAALTVVSPFNITSEVLSILPNSQSA
GSVHSMVQRSQSVPLNIMMQSELLPVQGSSNTTKITNVLLSKMEADGDESVRGLGVNNLP
SNYTARMNLTQILETTPAFAVGTSHQSSGPAAFELQQHGYLANASGKQVSFSAVDGQAQE
GAVEPDQQQQLQEIVQTQQEAEDEQQQLDFNNTVKDLLGDDTLNPSSQLVGQVASELNAV
ASDFSNDIRLTTDLSSSITDLNTLDPNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDT
VNSGFDWLESKDQPTTVEMLG
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaagctgatcagaagcctgcctccggactgggctctcttcca
gcgctggtgccgggactccagggacctgaagcgaacgcgttacagttcaaaatcaagaat
tcaatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgagaagttt
acagacatcgaaaagctctacctctaccttaagttgccttctggtcccagcagcggcaat
gataaaagtttccccatatctattcatcaccccaacccccaaattgtgcccaattggact
gagaatgagagggggtcgtccactcctggattatgcgagcagagttccatgtcatcgagt
cgcactcagcaaatgtatgcgttcaactggatacggaatcacctagaagagcacccggag
acgtccctccccaaacaggaagtgtatgatgaatacaagagctattgtgacaatctcggc
tacaatccattgagtgcagcagactttgggaagatcatgaagaatgtctttcccaatatg
aaggcacgtcgactcgggatgagaggaaaatccaaatattgttatagtgggttaagaaag
aaagcttttgttcacatgccgtcattacccaacttggatctgcagaaatcaggcgacggg
tgtgaactgatggagccagccggacagtcgccgagtgctgaggatgaaatgaggtccgcg
gcctgcggtttggtttgcgagtgggcccagaaggtcttgagtcgtcagtttgacaacgta
gaggaactggcgcgtttcctgctgaatagccactatatcggtaccaagtccatggctgcg
ctcactgttatgacgggaacgcccacaacaggcatgaagacaccaacacccgcctctgcg
tttgtgcccacggccgaggccaactccttccagccccaggtgaagacgctgccctcaccc
tctgtggacgcaaagcagcaactgcagcgaaagatccagaagaagcagcaagagcagaag
ctccactctcctttaccaaacgatgcgcaagtcaaaagaacggaggccagcacccccggc
ccgagcatcccctgcggcagccctgctttgctgtcccctcagcccaccataggcatcgta
gtagcagctgtgcccagcccagtcacggtacagagaagcaggcagctaatgacttccccg
agtcctgtcggaacaacggagggaaaagtgttgcctgtgaacttagtggtcacgcagtca
cttaagcagtcctccaaaacgccacagaatatcccagcaagtcccgtgggggaccgcttg
gcgcggcacagcacccggtacgctcaaatcttgcccaagccctcggccaccagtgccatc
acacttcggtcccctcccaccctgctcataaccaacagccccatcaaaactgtgatgccc
actccacacgtcagctcagtcaacgtggtcaaaatgacggccatcgcgttagctcctagc
agcagcggcaccaccaccagcagcagcaccgtcgtacgctccgcctcggccgggatgggc
cccacttccgccttagatgagtcacaaggtgcgagtctgaccgccgcggtcagagccgtc
gcctcgggtttgacctcctccgctgacatcaaggcgtccgaagctgcaacctataacagt
gcggagaagactgcaatggccgctagtgaggaaagagtggcaaagttcagggctgccagt
gagccaagcttccctgttaagtgctctccaggacccgacaaggtcttgcggatgaggagc
gactctgtatccctttccacttcggtagctgtagctgggattcaggacagcaataacagt
aactgccttgacaacaccttgtacttgactgttgataatcacaactcagccggcaacatg
tcaaccagcggttcctccatcagtattccggcttcaaaagactcttgcatcgatgtcaag
agtcccagaaagcgcacaggcccgaccggagagtctcatgttattcctgtaaagagagtt
tttatatctcagcagctacctgctgctgcagttgacaatcccaaacctggaatcagtgcc
gcagtgaagaggatcccgcgaccgggaactccagcccgaccggaaagcgccccgtgcaaa
gtgacggcgaaacccgtctcggtcggcccgacgcagatcctcgcgctttcggactcgccc
atcgcgcacatccggggctccccgactcttgtcaaaccgcaggcgctgatggtgaaacag
gacgccgaggttagcggcgaagcggcagggatgtcggaccaggtctttttgcagcagatc
actgcggacacacgtgccatcccaaacaactcaggagcacacaatgccgctgtgatgagc
gaactaaatagcacaatatgggaagagggtcagctggatgagctccggaaacactcgcag
atctcagcggaacacaagcaagccgtgacagagcagctttctctcatagcccaacccttg
gacacgccaggccagctggccctggcgcaggagatggttgacttttccggtgctcaaccc
aacatggactacttcccgttcaacgacgacgacatgacgcaggacagtatcgtggaggag
ctggtccagatggaggagcagatgaagctgaagagtctctttggcagctgcgtcgacgtt
tctctccaaggccagccggccagcaaccaaaactcggcgctcaacgctcaccaggctggc
acggctttctaccactccacccacagcagcaccactccggtccaaactcccacgccgact
cccacgccaaccccgacgcctacccctacctctgagatgaccctcagccacagcttgacc
agagagagcccgtgctcccgcatggcacctatcacccccgtggacggcgcgctaggtcgc
cacaccccaataagcacgccgctgtccaactgcagcagcagcgtccccccgagcccggtg
gagtgcaggaatccttttgccttcacgcccatcaactccagcatcactgcttaccacgac
gccagtatcgtctccagcagcccggtgaagcccatgcagaggcccatggcgacacacccc
gacaaggccaaactggaatggatcaataaccgctacaacagcaattcagccggacctttg
tccaaccacagcatcggcctcctgcctagctaccaagacctggttgatgaccagtttcgt
aaaccgcatgctttcgccattcccggccagtcctttcaagctcagtccaggccggattcg
actcattttggctctttggcgccgatctcccccgtgcagcagcaagtaaccactgcgacc
acgcccacaaaacaagagagcttcgccgtgccggccccgctggacaacaagacgccgagc
tcctcggcgtccggtactttccgctgccgcagcgtcagccccgccgtccgccagaggaac
tccagcggcaacacgggccctcagaccaccaccgccgccgccagcgccgccctcaccgtc
gtctcgccctttaacatcacctccgaagtgctcagcatcctgcctaacagccagtctgcc
ggttctgtccacagcatggtccaacgcagccagtccgttcctctgaacatcatgatgcag
agcgagttgttgcccgtgcagggctccagtaacaccaccaaaatcaccaacgtccttctc
agcaagatggaggcggacggggacgagtctgtccgcgggttgggggtgaacaacctcccg
tctaactacacggcacgcatgaatcttacgcaaatcctggaaaccactccggccttcgcc
gtggggacgtcgcaccagtcctccggcccggccgcctttgagctccagcagcacggctac
ctcgccaacgccagcgggaagcaagtgagcttctcggccgttgacggccaagcacaagag
ggcgccgttgagccggaccagcaacagcagcttcaagagattgtgcagacgcagcaggag
gcggaggacgagcagcagcagctggacttcaacaacaccgtcaaggacttgctgggggac
gataccctcaaccccagctcgcagctggtgggccaggtggcttcggaacttaacgcggtg
gcgtccgacttttcaaacgacatccgactgaccacagatctgtccagtagcatcactgac
cttaacaccttggaccccaatctgctctttgaccccaaccagcagcaggaacaatatgaa
gactcaacactggaagaactgaagaacgacccgctatttcagcagatatgcagtgatact
gtgaactccggcttcgactggctggagagcaaagaccagcccactaccgttgagatgctg
ggctga
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