Syngnathus scovelli (Gulf pipefish): 125970091
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Entry
125970091 CDS
T08785
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125970091 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125970091 (fan1)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
125970091 (fan1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
125970091 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
zf-WRNIP1_ubi
SAP
DUF4363
Motif
Other DBs
NCBI-GeneID:
125970091
NCBI-ProteinID:
XP_049578011
LinkDB
All DBs
Position
6:complement(6674546..6678892)
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AA seq
974 aa
AA seq
DB search
MAGKGDKLKTRRNVSLSKNKKRSGAVNATPITSFFSTPQPTKVSCPLCGQMVPKFGINDH
IDLQCKNFERTDSSATSASNIVVSPGKDSSKSSQLDPELEDETTTSPYFKSRTSLNVSRE
ISSKTVVRKLYLGSLSLKISTTCQKTDDRTHSDKHALSDPTKETLDDVSNSQKENLASQA
SGSNMDSIKAVELTTNVHVTCTTTETSFEKELKTETWPKVTLLSSSKLVKRKKETPTNSK
GSSLKKKPKHEVTSSVEAMFGKETGDGVKLNPEMPASVHYDLLSNSDEVAHNSGDLQTVS
LPEKNKSDITGDPSPLQRLPYYLRNFRTVLQAVLENDDDRALFNQDDMTLVQTFEKLSDK
CLLFFEVMGQKLYVRLFQRKLKWLQVVKLDYEEICSDLAPVAHELVQGGLLQTENDLSSI
EEALDLLPAPELKTLAKTFHLGQSGTQKQQLVDGLLRLSKQKSFFSLSQAQNNIGTVILK
RAKQLAGSCVRLCRGPRDVFSRILLLFSLSDTMDEEETAAGGQNQLYTILLVNSGRLTFP
DYTVQRMAKVFRDRDDLIRYDASMRALEEVTLAMQAGHWEEALDLYTTAKNEWQDQKMSY
DLSHQKELPVFLRSFTTGWAYTRILSRGVGILQRLRRYEEAVNELRCLLLQDVYCSDSRG
RWWDRLALNLQQHLKKPEKAIRAIKDGLSDPFVRTGHKLALYQRASRMRESASFKKYHRQ
LRDLPTLHIQEVRHVTIRGQLFPHEGGTGKSRFLVPSNGDDCTDGTVICSVEDLSLAHYR
QQGFDQGIHGEGSTFSTLFALLLWDIIFMDGIPDVFRNLYQACPLDFYTDCFYENRREAI
DCRVQLIREASVETLRDILEQVWISQEGKVCSCANWERFSSLSQAQSLACCMGGGFLAGV
ITRMAKDFRHCRGGLPDLVVWSTSDNSYKLVEVKGPNDRLSQKQQIWLYELQKLGADVEV
CHVVATGARGSRVE
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaaaggagacaaactcaagaccaggcggaatgtatcgttgtccaagaacaag
aagagaagcggcgctgtcaacgcgactcccatcacttcgttcttcagcaccccgcaacct
accaaagtgtcctgcccactttgtggtcagatggttcccaaattcgggatcaatgatcac
attgatttgcagtgcaagaactttgagagaacggacagcagtgctacatcagcaagtaat
attgtcgtgtcacctggcaaggattcctccaagtcctcccagctggatccagagctggaa
gatgaaaccacgacaagtccttattttaagtcaagaacctctcttaatgtgtctcgagag
ataagtagcaagactgtcgtcagaaagctgtacctcggaagtctctccttgaagatatct
acaacatgtcaaaagacagatgacagaacccactcagataaacatgcactttctgatcca
accaaagaaactttggatgatgttagcaactcacagaaagaaaaccttgccagtcaggct
tcaggaagcaacatggactcaataaaagccgtcgagttaacaaccaatgtacatgtgaca
tgtacaacaacagaaacaagttttgaaaaagagctcaaaacagagacgtggccaaaagtg
actctcctctcctcctccaaactagttaaaagaaaaaaagagacacctaccaatagtaaa
gggtctagtttaaaaaagaagccaaaacacgaggtaaccagctctgtggaagcaatgttt
ggcaaagagacaggagatggagtgaagcttaaccccgaaatgcccgcttcggtgcattat
gacctcctttcaaactcagacgaggtcgctcataatagcggtgatttacagacagtgagt
ctgcctgagaaaaacaagagtgacatcacaggtgacccttcacccctacaaagactcccc
tactacctacgcaatttcaggactgtcctacaagccgtgctggagaacgacgatgatcga
gccctcttcaatcaggatgacatgacgctcgtgcaaacctttgagaagctctcagataaa
tgtctcctgttttttgaagtcatggggcagaagttgtatgtgagacttttccagcggaaa
ctgaagtggcttcaagtggtgaaacttgattatgaagaaatatgtagtgatttggcgcct
gttgctcacgagttggtgcaaggaggtcttctgcaaacagagaatgacctatctagtata
gaagaagctcttgatctcctgccagcccctgaactcaagaccctggccaagacttttcat
ctgggccaatctgggactcaaaaacaacaactagtggacgggcttctccggctgagcaag
caaaagtcattcttctctctgagccaggctcaaaacaacattgggactgtcatcttgaaa
agggcgaagcaactggcaggttcctgtgtgcgtctgtgtcgtggtcctcgggatgttttt
tcccgcatcctcttgctcttctccttgtcagacaccatggatgaggaggagacggcagca
ggtggacaaaaccagctttataccatcttgctcgtcaactctggtcgtttgacctttccg
gattacacggtgcagcgtatggcgaaggtgttccgagacagagacgacctcataaggtat
gacgcatccatgcgggccttggaggaggtgaccttggctatgcaagcaggtcactgggaa
gaagctttggacctgtatactacagccaaaaatgagtggcaggaccagaagatgagttat
gacctaagtcaccaaaaggagcttccagtgttcctacgcagcttcaccacaggatgggct
tacactcgtattttgtcgagaggcgtggggatcttacagaggctacgtcgatatgaggag
gcagttaatgagttgcggtgcctcctcctgcaggatgtttactgttctgacagtagaggg
cgctggtgggacagactggcactgaaccttcaacaacacttaaaaaaacctgaaaaagct
atccgtgctatcaaagatggcttgtccgaccctttcgtgcgaacaggacacaagctggcc
ctctaccagagagcttcgagaatgagagaatctgccagcttcaagaagtaccatcggcag
ctcagagatcttcccactctccatatccaggaagtcagacatgtgaccatccgaggacag
ctgtttccccatgaagggggcaccggaaaatcacgctttctagtaccatcaaacggcgac
gactgcaccgatggcactgtaatatgctctgttgaagacctgtctttagcacattaccgc
cagcaaggctttgaccaaggaatccacggagagggctcaacattctcaacactctttgcc
ctcctattgtgggacatcatttttatggacggtataccagacgtcttccggaatctctac
caggcttgcccactggacttttacaccgactgcttctatgagaaccgaagggaagcgata
gattgccgtgtacagttaattcgagaagcttctgttgaaaccttgcgcgatatattggag
caagtctggatttcccaagagggtaaagtgtgttcatgtgccaactgggagcgattttct
tcgctaagtcaagcccagtctctcgcgtgctgcatgggtggaggcttcttggcaggagtt
atcacacggatggcgaaagacttcagacactgccgtggaggtttgcctgatcttgttgtg
tggagcacatctgataactcatataagctggtggaggtgaaggggccaaatgaccgtctg
tcccagaagcaacagatctggctgtatgagctgcaaaaactcggtgctgatgtggaggtg
tgtcatgtggtggccaccggagccagaggatctcgtgtcgaatga
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