Syngnathus scovelli (Gulf pipefish): 125970097
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Entry
125970097 CDS
T08785
Name
(RefSeq) plakophilin-3 isoform X1
KO
K28841
plakophilin 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04382
Cornified envelope formation
sscv04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125970097
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125970097
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Adaptin_N
Atx10homo_assoc
ZER1-like_2nd
ARMC9_ARM
WRM1_C
BAR1_C
DUF383
Cnd1
Motif
Other DBs
NCBI-GeneID:
125970097
NCBI-ProteinID:
XP_049578028
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All DBs
Position
6:6346139..6359874
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AA seq
838 aa
AA seq
DB search
MLLLEPEKPKVLFLLEHLYFSPNTSVTTYGLPTDIHLGCGTSNSDEMARARRVQQQVQMR
LAEKSTLPRHNGSAVTSAMSDYGGSSTMKYQMYNPSSKVSYVFSGSRTMTPQTSQRSGFS
SLSAGPDMAQMHKISVGGGRLGGGYYREDAHMGTYQGNQYQARLEPDMVALHTMRQQTMP
ANAWMVDGSDGASLASDRDAGFSRHFMQCNGYMGQVKQGGGCMTLPAGSMRRSLSGTIPR
GPEIIDMGMVQQSSYKGPAYRTINRINHRNRMSMGSMSGTLQRQMSSASSMFGGDKVDSG
FIGPGISSGSQGNLAMQRRQSTMSRAMSVKSMQSVGRGVDIFNGQMGIGSLGNLNGIETL
DMARAVQYLREPDPDLQVLGAAYIQHECYNDSDAKNEVRQSKGINELVKLFNSENQEVQR
YATGATRNLIYENMENKVALIEEGGIPQLVEALKEPDDELQKNITGILWNLSSKDTLKEK
LAREALPDLTDKILIPLSGSEGSEAITQSASEAEIFYNTTGCLRNLSSVNEKTRQQMRQT
HGLVDSLVRYIKGSLEENKPEDKGVENAVCVLRNLSYQLYSEMPPSALIHLEGPSRAEDS
GKGEAIGCFTPQSKKANKSKNQDLSTFSEVIRVPKGMEWLWHPQILTLYNRVLQQCEINS
TTREAAAGALQNLTAGDKRWAGVLSRLALEQERMLPVLLDLLRTNNDLELRSITGFLRNL
SRHAKDKNHMATKVVNNLVTKLPADGYQKEPSSDVVVNICGILNNLVTSSSVAARDVCFF
DGLPKLVAIKNTNDSSYGKMKAAKAAATVLSNMFQYKKLHKDYKNKGFMRPDFVNTLA
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcttctacttgaacctgaaaagcccaaagtattgtttttgctcgaacatctgtacttc
tctcccaacacttcggtcaccacctacggcctcccgaccgacatccatctcgggtgcggc
acctcgaactcggacgagatggcgagggctcgccgggttcaacagcaggttcagatgagg
ttggccgaaaagtctacacttccgcgtcacaatggctccgctgtcacctccgccatgtca
gactacggtgggtcttccactatgaaataccagatgtacaatccaagctccaaggtgtcc
tacgtcttctcaggctccaggacaatgacgccacagacatcgcagaggtccggtttcagc
tctctctcggccggcccggacatggcccagatgcacaagatcagcgtcggcggcggacga
ctcggcggaggttattaccgtgaagatgcccacatgggtacttaccaggggaaccagtac
caagcccgcctggaacctgatatggtcgccttgcacaccatgaggcagcagacgatgccg
gcaaatgcttggatggtggacggcagcgacggagccagcttggcctccgaccgtgacgcc
ggcttcagccgccatttcatgcaatgcaatggctacatgggccaggtgaagcaaggagga
ggatgcatgacgctcccggcggggtccatgcgccgatccctcagcggcactatcccgcgt
ggcccggagattattgacatggggatggtccagcaaagttcctacaaaggcccggcttac
cgcaccatcaacaggattaaccatcgaaaccggatgagcatgggctccatgtcggggacc
ctgcagcgccagatgtcaagcgcgtccagcatgttcggaggggacaaagtggactctggc
ttcattgggccaggaatttcctcaggttcccagggaaatttagccatgcagcggcgtcaa
agcactatgtcccgggccatgtcggtcaaaagcatgcagagtgtgggccgaggtgtcgac
atcttcaacgggcagatggggatcggaagcttggggaatctcaacgggattgaaactttg
gatatggccagagctgtccagtacctgagagaaccggaccccgatttgcaagtcctgggt
gcagcttatattcaacacgagtgttacaatgacagcgacgccaaaaatgaggtgcgtcaa
tccaagggcatcaacgagctggttaaactgttcaactcggagaatcaagaagtgcagcgc
tacgccaccggcgccacgcgcaacctcatctacgagaacatggagaacaaagtggcactg
atcgaggagggcggcatcccccagttggtggaggcgctcaaggagcccgatgacgagctc
caaaagaacatcaccggcatcttgtggaacctttcatccaaagacaccctgaaggagaaa
ctagcccgagaggcacttccggatttgaccgataagatcctcatcccgctgtcgggcagt
gagggctcggaggccatcacgcagtcggcctccgaggcggaaatcttctacaataccacc
gggtgtctcaggaatctgagctcagtgaatgaaaaaacccgccagcagatgagacaaacc
cacgggctggtcgattctttggtgagatacatcaagggctcgctggaggagaacaagccc
gaggacaagggggtggaaaatgcagtgtgtgtcttgaggaacctctcctaccaactgtac
agcgagatgccgccgtcggctctaattcacctggaagggccgagccgagccgaggactcc
ggcaaaggcgaagccatcggctgcttcacgcctcagagcaagaaggccaacaaaagcaag
aaccaggacctgtccacattctccgaggtgatccgcgttccaaaggggatggagtggctg
tggcatccgcagatcttgaccttgtacaaccgcgtgctgcagcagtgcgagatcaactca
accacgcgagaggcagcggcgggagcgttgcagaacctaacggcaggagacaagcggtgg
gcgggagtcctgagccgcctggccttggaacaggagcgcatgttgcccgttctactggac
ctgttgcgcaccaacaacgacctggagctgcgttccatcacgggcttcttacgaaatttg
tcccgccacgccaaggataagaatcacatggccacaaaagtagtgaacaatctagtgacc
aagctgcccgccgacggctaccagaaggagccatccagcgatgtggtggtcaacatctgc
gggattcttaacaacttggtgacctccagctcggtcgccgccagagacgtgtgcttcttt
gacggcttgcccaaactggtcgccatcaaaaacaccaatgactccagttatggaaaaatg
aaagcagccaaagcagccgccacagtgctcagcaacatgttccagtacaagaagctgcac
aaagactacaaaaacaaaggctttatgagaccagactttgtaaacacgctcgcttaa
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