Syngnathus scovelli (Gulf pipefish): 125970129
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Entry
125970129 CDS
T08785
Symbol
rapsn
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse isoform X1
KO
K24924
receptor-associated protein of the synapse
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125970129 (rapsn)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
125970129 (rapsn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
zf-RING_11
TPR_MalT
TPR_16
TPR_10
SNAP
zf-RING_2
RPN7
TPR_11
zf-RING_5
DUF3856
Prok-RING_4
zf-C3HC4
zf-RING_UBOX
RNPP_C
zf-rbx1
Cys_rich_CPXG
COG4_N
zf-RING_Vps41
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
125970129
NCBI-ProteinID:
XP_049578100
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All DBs
Position
6:complement(6592478..6600027)
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AA seq
448 aa
AA seq
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MNIFMRHLNTEMGQDQTKQQIEKGLRLYQSNQTDKALQVWTKVLEKTSDPGGKFRVLGCL
ITAHSEMGKYKDMLRYALDQIDTAREMEDPDYLTEGYLNLARSNEKLCDFHKTVSYCKTC
LNMQGTTVSLQLNGQVCLSMGNAFLGLSHFQQALESYEKALRYAHNNDDKMLECRVCCSL
GNIYVHLKDYEKALFFPCKAAELVNDYGKGWSLKYRAMSQYHMSVAYRKLERLPDAMECC
EESMKIALQHGDRPLQALCLLNFADIHRYRRDCDKAFPRYESALSIMTEIGNRLGQAHVQ
MAVAKCWLLLKEYMKALDSLERAQALADGMGNKVCDVPRHQRKIVQILPMISLCLRLKLC
TLKAHCLREGIYRNQGRQEELREQVVKFLQCVEELELYCGMCGESIGDRDQKLQALPCSH
IFHYKCLQTNGTKGCPKCFKNSMKPGFV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttatgaggcacctcaatacagagatgggccaggaccaaaccaagcaacag
attgagaaaggactgaggctgtaccagtccaatcagaccgacaaagctttgcaagtgtgg
acaaaggtgttggagaaaacttcggatcctggagggaagtttcgagttttgggatgcttg
atcacggcgcactcggaaatgggaaaatataaagacatgctcaggtacgccttggatcaa
atcgacacggctcgagaaatggaggatccggattacctgaccgaaggctacctgaacttg
gcgcgcagcaacgagaagttgtgcgactttcacaaaacggtctcgtattgtaagacctgc
ttgaacatgcaaggcaccacggtcagcctgcagctcaacgggcaggtgtgtctcagcatg
ggcaacgccttcctgggcctcagccacttccaacaagctttggagagctatgagaaggcc
ctgcgctacgcgcacaacaatgacgacaagatgctggagtgccgagtctgctgcagtctg
ggaaatatttacgtccacctgaaggactacgagaaagctctgttcttcccctgcaaagca
gccgagctggtcaacgactacggcaaaggttggagcctcaagtatcgagccatgagtcag
taccacatgtccgtggcctacaggaagctggagcgcctcccggacgccatggaatgctgt
gaggaatcaatgaaaattgctctgcagcacggcgaccgtcctctgcaggctctgtgtttg
ctgaactttgcagacatacaccgctatcggcgtgactgtgataaagcattccctcgttac
gagtcggcgttgagtatcatgactgagattgggaatcgacttgggcaagctcatgtgcag
atggcagtggccaagtgttggcttctgctgaaagaatatatgaaggctctggattctctg
gaacgagctcaggccttggcagatggaatgggaaacaaggtttgtgatgttcctcgccat
caacgtaaaatcgtgcaaattctaccgatgatctcgctgtgtttgcgcttgaagctgtgc
acgctgaaggcccattgcctgagggagggcatctacaggaatcagggcagacaggaggag
ctgcgtgaacaggtggtgaagttcctgcagtgcgtggaggagctggagctctactgcggc
atgtgtggcgagtccattggggacagggaccaaaagctgcaggccttgccctgttcccac
attttccactataagtgtctgcagactaacgggacaaaaggctgtcccaagtgtttcaaa
aactccatgaagccaggatttgtgtga
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