Syngnathus scovelli (Gulf pipefish): 125970169
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Entry
125970169 CDS
T08785
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125970169 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125970169 (nup93)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125970169 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
125970169
NCBI-ProteinID:
XP_049578137
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All DBs
Position
6:9489956..9507833
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAKQLAAETEAASELPHVERNLQEIQQAGERLRSRTLTRTSQDSADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEVYHRESMLVQWEQVKERVLHTLLGAGEDALDFSQDVEPSFVSDITAPGRSALDS
VEMAYGRQIYAFNEKIVNGHIQPNLGDLCASVAESLDDKNVSDLWVMVKQMTDVLLVPAK
DTLKSRTSVEMQMAFVQQARGFLENSYKNFTMVTVFGNLHQAQLGGVPGTYELVRSFLNI
KLPGPLPGMQDCDIEGHPVWAVIYYCLRCGDMNAAMHVINEVKHHLGDFKTWFQEYANSP
DRRLSPTSENKLRLHYRRVVRNTPDPYKRAVYCLIGKCDVSDNHGEVADKTEDYLWLKLN
QVCFDDDGGSSTQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLHELRLLLKSSGQSAQLLSQAPGDPPTVRRLNFIRLLMLYTRKF
ESTDPREALQYFFFLRNEKDSLGENMFMRSVGELVIESREFDMLLGKLEKDGSRRPGVID
KFAGDTGAIISKVASEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVIAQISAPQSN
KERLKNTALAIASRYRSQSIAGDKFIQSTFYLLLDLMTFFDEYHAGHIDRAYDVMERLKL
LPLSQESVEERVAAFRNFSDEVRHNLSEVLLASMNILCRQYKRLRGAPAGTPGRAQRTLD
DRDTQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagggcttcggggagttgctgcagcaggccaagcagctggctgcggagacg
gaggccgcgtcagagctgccacatgtcgagaggaaccttcaggagatacaacaggcagga
gagagacttcgatcacgcacgctcacccgaacatcacaggattctgctgatgtaaaagcg
tcaatcctcctcggttccagaggtttggacatcttccacatttctcagcgactggagagt
ttgagtgcggcgactacctttgagcccctggagccggttaaagacactgacatacagggc
ttcttgaagaacgagagggacaacgccctgctgtccgccatcgaggaatcgcgccgcagg
acattcctgctggctgaagtgtaccatcgtgagtccatgctggtccagtgggagcaggtc
aaggagagagtgttgcacacactcctcggggcgggagaggacgccctggacttcagtcaa
gacgtggagcccagctttgtgagtgatataacggcaccgggaaggagtgctttggacagc
gtggagatggcatatggacggcagatctatgcgttcaacgagaagatcgtgaatggtcac
attcagccgaatctgggagatttatgtgcatctgtagcggaaagtttggatgacaagaat
gtgtcagacctgtgggtgatggtgaaacagatgaccgatgttttgctggtacctgccaaa
gatacactgaagagtcgcacttcggttgagatgcaaatggcgtttgtgcagcaggcgcgc
ggcttcctcgagaatagttataaaaattttaccatggtaactgtgttcggaaatcttcat
caagcccaactgggaggggtgccgggaacatacgaacttgtacgcagtttcctcaacatc
aagttacccggtcccttgcctggaatgcaggattgtgatatagagggccacccagtgtgg
gctgtcatctactactgtctacgttgtggagacatgaatgcggccatgcatgtcatcaat
gaagtgaagcaccatctaggagacttcaagacatggtttcaggagtacgcaaacagccca
gacagacgcctttccccaacttcagagaacaagcttcgtctgcactaccgcagagtagtg
aggaacaccccagatccctacaagcgagctgtttactgcctcatcgggaaatgtgacgtc
agcgataaccatggagaggtggcggacaagactgaagactatctatggcttaagctcaat
caggtctgcttcgatgatgatggcggtagctcaactcaggaccggctgaccttgccacag
ttacaaaaacaactgctggaggactatggagaatcccatttctctgcaagccagcagcct
tttctatatttccaggtcctattcctgactgctcagtttgaggccgcggtggcattcttg
tttcgcgttgagagactccggagtcatgccgttcacgtggccttggtgctgcatgagcta
cggctgttgctcaagtcctctggccaaagcgctcagctgctgagtcaagcgcccggtgac
ccgcccactgtgcgccgcctcaactttatccgcctgctcatgctttacactcgcaaattt
gagtcaacggacccacgggaagccctgcagtactttttcttcttacgcaatgagaaggac
agcctaggagagaacatgttcatgcgaagtgtcggtgaacttgttattgagagtcgagag
tttgacatgttacttggaaaattggaaaaagacggaagcagaaggcccggagtcattgat
aagtttgccggagacaccggagctatcattagtaaagtggcttcggaagctgagaacaag
ggtttgtttgaagaagcagtcaaactgtatgagctggccaagaatccagacaaggtgttg
gagctgatgaacaggttgttgagccctgtcattgctcaaatcagcgctcctcagtctaat
aaggagaggctcaaaaacactgcactagccatcgccagtaggtaccgctctcaaagcatc
gcaggtgacaagtttatccaaagcactttctacctacttctggatctgatgactttcttc
gatgagtaccatgcagggcatatcgatcgagcatatgatgtgatggagcgcctgaagctt
ctgcccctcagccaggaaagtgtggaggagagagttgcggccttcaggaactttagtgac
gaggtgcgtcacaacctgtcagaggtgctgttagcatccatgaacatcctgtgcagacag
tacaagcgtctgaggggggcgcccgcaggcacaccgggacgagctcaaagaactttggat
gacagagacacgcagctgcgcagtcaagctagagccttgatcaccttcgctgggatgatt
ccctacaacatggccggggacaccaatgccagactggtgcaaatggaattactcatgaac
tga
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