Syngnathus scovelli (Gulf pipefish): 125970210
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Entry
125970210 CDS
T08785
Name
(RefSeq) zinc finger homeobox protein 3
KO
K09378
zinc finger homeobox protein 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125970210
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125970210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf-C2H2_jaz
zf-C2H2
zf-C2H2_4
zf-C2H2_ZFHX3
zf-H2C2_5
Zn_SUZ12
zf-met
zf-Di19
Motif
Other DBs
NCBI-GeneID:
125970210
NCBI-ProteinID:
XP_049578228
LinkDB
All DBs
Position
6:complement(8887990..8902777)
Genome browser
AA seq
2778 aa
AA seq
DB search
MDIGEGGGGDGGGGEDRDADLGPQALSGTFLTSAFIAEQGMASRTSAGVPAKEPSTLHEK
QCEAGAEGSRSGGETQVGGQKDRRHHTRQEDGACQKQQIKTIFREEYLSGQNGEGYSGKG
VKSATGGLPKTLGSSSRRGDEEEEEEEEEEEEEAISNQSQTKSKCSLLPQQSQQSASSST
VKASGTLDSKTAASPKSSQTSPISPKASPFLSTSPKHLTSSSHSSALLSDAEAKDIPGDQ
GWISGFPQSFKSQQSTLAFPLAGVEGASAPAENDGPAGVPHSSISNGDGAKAPEPNDSQL
ETDMDDELDTEREPKDAVPQNLTQELSPNSLTNHMTLMHSRNSCKTLKCPKCNWHYKSQH
TLQLHMREKHPETGSQCVCATSGGKCVCGSSTRGVCGYCTSGKAHPRLARGETYACGYKP
YRCEVCDYATSSKGNLSIHMQSDKHLNNVQNGGHANSQTHTLHVGNTNGGSSNGAAIDEQ
TYKQPLPIPTSAGQPTKLTAPAHSPSHGKRWRCDVCDYETSIARNLRIHTTSEKHTHNML
RLQRGYYLSHCRSLAPHLKHLQNTGGELSLNMRLTPQQVTEQPVTLGSTLTPSPSPSPSP
PPVLSLSPTGPLSQGVFQCLICSCFSSDSLESVEQHLSAPRSLPQSEWCSLVAGGCHCRL
CGYTTPLRANFSLHCQTDRHRTRYQLAAHVQEGGDREQEGAALIAKGNPIQLRCNLCEYA
TSSLEKLQGHSRSSHHESSVRVYKFLQQYDGEVDGGSFLFHCLLCNNSSSSKLQVLKHSQ
TPTHQQREGLLQLQPMGGEELAAIFTIRKSTDGVTGELNEDMENSGEVTTGPLDQTKDNL
GVKPSDNQTGEKAAGEADRRESFKRQASGCGEIENSITTKRPRTHQLSENQQTVLCPLCQ
VNISYAHLRPHLTHVHSVAQDCVDKLISTVTPSLEQALENELPSDLCMGDTIKDQNVKIS
PTGLSHATDSLTSDDSPKNKSISGENTEGNEAAPKDVTALLTPPLEDNATHPSNGKLAPQ
SLTHTPPSSPTADPPPLSDRHGYRFRCSRCSLAFPTQEKLQLHWQYHAMRAATECPLCSR
QCRSQEALQRHMQNIHSQPDNTQNTASLPHTAQYTEHSKSSVKQVSSLSPQAGQEAGEDE
ELEEEVQEEEEEEDIEGKEQNEEWRTKDKDFVAETGGGDEQLTEQEKVPNEELSSEPSSI
SLTKKSLNPTMDRYLDPSRPYKCTICSESFTQKTILLVHYNSVSHLHRARRALQESSTGV
SAPEAPRGQDPRPYRCKLCGVGYSQSSTLDIHLRSVLHQTRARAAQNPGAQTPVSTVATL
LSATTMTTTTSATTGKETSKSLPFTKKPDEASSSSGLVAELQATVSTEGQQAKKRVAELI
ASRNQLLLMQQQQLAQAQAQAQLQHTALLQAQVMQHLPIGPESLFQHFSLAPENLLSLQQ
QLLLPFYFPGDMKLHTELAIKSLEHTQSETAKSTMNEQIKGEGKKEKNPQTDEKHTPREL
SSSDNIQTKDVMPSDTRVECATRSSSSPKEKECIRDLVGEKEEMSAPIVKNESPTQENDS
STVNVPKLQCPPPRVPYAAVNGEALRTLLQSYGYELALQYIQSRHRHQQQIATQMINMRN
ECSDIRKMELYSGEQKGSIGTEDGMPQSYNKDVKNDVQDIQSFPGENNPGKYDDANEIAI
KEKGCCGRGQKCRDCGKFFSDAMILKSHQEYIHRQVLPTAALERFSREYRLQYDQLYPLK
ENKSGEDPSQSTPVSIPASESELVSEADEPQVKISPPSSISDPETKTCETAEDLSLASVP
SPLSSQSQEAPLTSTSTVISQNASPAKAIPIPLPKIPMLPLSQLPIPPLTLPKLPLPPIP
FPMELPLIPPVVMQPVGLQPPNWLDSSVNPDLAKLYQSQLLGQQAPISPAAISQPSQLSP
ALLGQPPHVNSSLLSQPAQRDQPQISPTILDQQQGKRTRTRISEDQLNILRKHFDINSLP
SDEELNKISSLSGLPHKVIKHWFRNTLFKERQRDKDSPYNFNNPPTTALEESREEVIQNL
SLKLSPSSPSPAPTDMSRQTPLTDSQRGNPNRGRRSSRTRFTEKQLEMLQGVFEATPYPR
EEEYDRLSSQLSLPNRVIVVWFQNARQRARKSQDRGADDGIEGTSQLDILRKRDRYYKND
DTEDNSNGDEGQSDSHNENSMDLTYEYYTHPDSPFLDSSTLSTESEHQMDNEDLTPAIKK
QENTTATPRTSKTVKKEMAELNTDSTEIVQVLQTVFKAENLVPPLQGRSAERPQPHSTDP
SQSTVQNSPSSDESQDHKESLSPTKGVEKPALISQSLPLSSELEKKHTLQHDASSRQSTE
TQSLSHLQIPNSFQCNLCPLSLPSFQMWQEHQTRHLLAAQSQVQLLHSGFTDRTLPYMML
HSNHSLMASQMLSGAMTQLHPNATSPMISHLNSTQVKNSLADLSQSSLKQNSKLMSEGSF
DIQRYNREAEEEHRRDKRQRTTITPEQLEVLYQRYSLDSNPTRGVLEGIAQDVGLTRRVV
QVWFQNTRARERKGQFRSMGPGSGFSMALNHLRCPFCRALFKVKSALDAHIRSRHWAEAE
RAGYNLSMNNCSSGPNGMAMSSVMDKAGPSLSCHIIPNTGIGISNKEQTVKPVTFLSSTI
DPNNPGEYDDFDEDDEEFQCEEGSSMANQGLPSPDGSGGQSSDWGETLQPHQHQQQRQRT
QMSHFQILQLKDFYKSHRTPNRHECEALGRELGLPHRVVQVWFQNARAKEKRARTLSSDS
ADREQAELTPGAGERDRA
NT seq
8337 nt
NT seq
+upstream
nt +downstream
nt
atggacattggtgagggaggaggaggggatggagggggaggagaggacagagacgcggac
ctcggtcctcaggctttatccggcactttcctgacctcggcgttcattgccgagcagggg
atggcctctcgtacctcagccggggtccctgccaaagagccctcgaccctgcacgagaag
cagtgtgaggcgggcgccgaggggtcccggtctggaggagagacccaggtaggggggcag
aaggacagacgccatcacacgcgtcaagaagatggagcgtgtcaaaagcagcagataaaa
accatcttccgggaagaatatctgtcagggcaaaacggggagggttactctggcaaggga
gtgaagtcggcaacagggggtctcccaaaaaccctcggcagcagcagcagaagaggagat
gaggaggaagaagaagaagaggaggaggaggaggaggaggccatctcaaaccaaagccaa
actaaatccaaatgttctttattacctcaacagagccagcaaagcgcttcttccagcacg
gtaaaggccagtggcacgctcgacagcaaaacagccgcatctccaaagtcctcccagact
tcccccatttctccaaaagcctccccttttctctccacttctccaaagcacctcactagt
tcatcccactcttctgccctgctgagtgacgcagaggcaaaagacataccaggagatcag
ggctggatttctgggtttcctcagagctttaaatcccagcagtcgactctggctttccca
ctggcaggtgtggagggggccagtgcgcctgctgagaacgatgggccggcaggggttcct
cactcttccatttccaatggagatggtgccaaagctccagaaccaaatgacagccagctt
gagacggacatggacgacgagcttgacacagaaagagaaccgaaagatgctgtcccccaa
aacctcacccaagagctctctccaaattccctgacgaatcacatgactttgatgcactca
cgcaattcctgcaagacgctgaaatgccccaagtgtaactggcactacaagtctcagcac
acactgcaactccacatgagagagaaacatccagagacgggcagccagtgtgtgtgcgcc
acctctggtgggaagtgcgtctgcggcagctcgacgcggggtgtgtgtggttactgcact
tcagggaaagcccatccccgcttggcccggggtgaaacctatgcctgcggctacaaaccc
taccgctgtgaggtgtgtgactacgctacctcgtccaaaggcaacctcagcatacacatg
cagtcagataaacaccttaataacgtgcaaaacgggggacacgccaatagtcagacacat
actttgcatgtcggtaacaccaacggcggctcctcaaacggggccgcaatagacgagcag
acatataagcagccgcttccgattccaacctccgccggccagcccaccaagctcacggca
cctgcgcactctccatcgcacggcaagcgttggcggtgtgacgtctgcgactatgagacg
agcatcgcccgcaatctgcgcatacacaccaccagtgagaaacacacgcataacatgctg
aggctgcagaggggttactatctgtcccactgcaggagccttgctccccatttgaaacat
ctacagaacacaggtggggaactatccttgaacatgagactgacgccgcaacaagtcacc
gaacagcctgtcactcttggctcgacgctgactccttccccgtcgccttcaccctctccc
ccgccagtcctgtctttgtctcccaccggacctctctcccagggtgtcttccaatgcctc
atctgctcctgcttttcttctgacagcttagagtctgtggagcagcacctgagcgcccct
cgctccctgccccagtccgaatggtgctcccttgtcgctggcggctgccactgcagactg
tgcggctacaccaccccgctgagggctaacttctccttgcactgccagactgacaggcac
agaacccgataccagcttgcggctcacgttcaagaagggggcgaccgggaacaggaaggt
gccgccttaatagctaagggcaaccctatccagctgaggtgcaacctgtgtgagtatgca
acgagcagtttggagaagctgcaaggacattcccggagttcccaccacgagtccagcgtc
cgggtttacaaattcctgcagcagtatgacggtgaggtcgacggcggttcattcctgttc
cattgtctcctatgcaacaactcctcttcctccaagcttcaagttttaaaacatagtcaa
accccgacccatcagcaaagggaggggctgctacagttgcagccaatgggcggagaggag
ctggcagcaatttttaccatcagaaaaagcaccgatggggtcacaggagaacttaatgag
gacatggaaaattctggcgaggtcaccactggtcctctggaccaaaccaaagacaactta
ggggtaaagccaagtgataaccaaacaggtgaaaaagcggccggggaggcagacaggagg
gagtcttttaaacgtcaagcgtctggatgtggggaaatagaaaactccatcacaaccaaa
cgaccccgaacacaccagctgagcgagaaccagcagaccgtcctgtgtcctttgtgccaa
gttaatatctcatacgcacaccttcgcccgcatctcacacatgtgcacagtgtggcacag
gactgtgtcgataagctcatcagcacagtcaccccatccttggaacaagcgctggaaaat
gaactaccctctgatctgtgcatgggtgacacgatcaaagatcaaaacgtgaaaattagc
ccgacaggtctttcgcatgcaaccgattcccttacatcagatgattcaccaaaaaacaaa
agcatttcaggagagaacactgagggaaatgaagccgcacccaaagatgtcacagctcta
cttaccccacccctagaagacaacgcaactcacccttccaatggaaaactggctcctcag
tctctgactcacacacctccctcctccccaaccgccgacccccctcctctttctgatcgc
catggttaccggtttcgttgcagcaggtgcagcctagcgtttcccactcaggagaagctc
cagcttcactggcagtaccacgccatgagggcggcgacagaatgccccctctgctccaga
cagtgtcgcagtcaggaagcgctacagagacacatgcagaatatacactcgcagccagac
aacacacaaaatacagcctcgctgcctcatacggcacaatacacagaacacagtaagagc
tcagttaaacaagtttcgagtttgtcaccccaagctggccaagaagccggtgaggatgaa
gaactggaggaagaagtgcaggaagaagaagaagaagaagacattgaaggaaaggaacaa
aatgaggaatggagaactaaagacaaagattttgtcgctgaaactggcggaggtgatgag
caattaactgagcaagaaaaagtgccaaatgaggaactttcatcagaacctagctccatt
tctcttaccaaaaagagcttgaacccaacaatggaccggtacttagatccatcaaggccg
tacaagtgtaccatatgttctgaatcttttacccagaagacaattcttctggttcactac
aattcagtgtcccatctccaccgggccaggagagccttgcaggaatcaagcacgggtgtc
tccgccccagaggctccccgtggccaagatcctcgaccctaccgatgcaaactatgtggt
gtgggctatagccagagctccacattggacatacatctacgctcagttcttcaccaaaca
agagctcgtgctgcacagaatccaggtgcacaaacaccggtgtctactgtagctacatta
ttatccgccaccaccatgactactactacatctgctacaaccggtaaggaaacatcgaag
agtttgcctttcaccaagaagccagatgaagctagttcctcatcgggattagtcgccgaa
ctccaagcgactgtatcaactgaaggtcaacaggctaaaaagagagtggcagaactgata
gcgtcaagaaaccagctgctattaatgcaacaacagcagttggctcaggcacaggcccaa
gcgcagttacagcacacagcgttgctccaggcccaagtaatgcagcatcttcctattgga
ccagagagtctctttcagcatttctctttggcaccagaaaacttgctgtctctgcagcag
caactccttctgcccttttattttcccggagacatgaaacttcacacagagttggcaata
aagagcttggaacatacccaatctgagacagccaagtctacaatgaatgaacagattaag
ggagagggtaaaaaggagaaaaacccgcaaacagatgaaaaacatactcctcgtgaattg
tcgtcctcagataatattcaaacaaaagatgttatgccttctgacaccagagttgaatgc
gccactagatcctccagcagcccaaaagaaaaagaatgtatcagagaccttgttggtgaa
aaggaagaaatgtctgctcctattgttaaaaatgagagtccgacacaggaaaatgattca
tccacagttaatgtgccaaaattacagtgccctccaccaagagtgccatatgctgctgta
aacggggaagctcttaggaccttgttgcagagttatggctacgagttggcactacagtat
atacaaagcagacataggcaccagcagcagattgcaacccaaatgataaatatgagaaac
gagtgctctgatattcgcaagatggaattgtattcaggggaacaaaaagggtcaattgga
acagaggatggaatgccacaaagctacaataaggatgtcaaaaatgatgttcaagacata
caaagtttcccaggggaaaataatccaggcaaatatgatgacgcaaatgaaattgccatc
aaagagaaaggctgctgtggaagaggacaaaagtgtagagattgcgggaagtttttttca
gatgccatgattttaaagagtcaccaggaatacattcacagacaagtgcttcccactgcc
gcgctagagaggttctccagagaataccgactacagtatgatcaattgtatcccttgaaa
gagaacaaatctggagaagatccatctcagagtacaccagtttcgattccagcttcagaa
tcagaacttgtatctgaagcagatgagcctcaagttaaaatatcacctccatcctcaatt
tcagatcctgaaacgaaaacgtgcgagacagctgaagacctatcccttgcctctgtaccc
tctcctctttcttcccagtctcaagaggcgcctcttacaagcacctctactgttatttct
caaaacgcatcgccagccaaggccatacctattcccttaccaaaaatacctatgcttcct
ctgtcgcagcttcctattccccctttgactttacccaagctccctctaccgccaattcct
tttccgatggagctaccgcttattcctccagttgtaatgcagcccgtgggtctgcagccc
ccaaactggttggactcaagtgtaaacccagatttggcaaaactctaccaatctcaactg
cttgggcaacaggcacctattagtccagcggccatttcccaaccatctcagcttagcccg
gcgttgctcggccagcctcctcacgtcaattcctcgttgctaagtcaaccagctcagagg
gatcagcctcaaataagcccaacaatactggaccaacagcaaggcaagagaactcgcact
cgaatctctgaggaccaactgaatattctgagaaaacactttgatatcaacagtctccca
agtgatgaggagctcaacaagatatctagtctgtctggtctacctcacaaagtcatcaaa
cactggtttcgcaacactctttttaaagagcgccaacgtgataaggactcaccatacaat
ttcaataaccccccaaccacagcacttgaggagtccagagaggaagtcatacagaaccta
tctctgaagttgtccccgtcatccccatctccagcaccaaccgacatgtcccgtcaaacc
ccgctgacggacagccaaagaggcaatccgaacagggggaggcgttcttctcgaactcgc
tttacagagaaacagctggagatgctgcagggggtgtttgaagcaactccctatcctaga
gaagaggaatatgacaggttgtcatcccagttgtctctcccgaacagagtcattgtggta
tggttccaaaatgcgaggcaaagagcccgcaagagccaggacagaggggcagatgatgga
atcgagggaacgagccagcttgacattcttcggaagagagaccgatactacaaaaatgat
gacactgaggataacagcaatggggacgaagggcaaagtgactctcacaatgaaaattct
atggatttgacctatgagtattatacccatccagactctccttttcttgattcatcaacc
ctttccacagaaagtgagcatcagatggacaatgaagacttaacacccgctatcaagaaa
caagaaaatacaactgccactcctcgaaccagcaaaactgttaaaaaagaaatggcagag
ctaaacactgacagcacagaaatagtgcaggtattgcaaactgtgttcaaagctgagaat
ctggtcccacctctacaaggaagatcagcagaaagacctcagcctcactctactgacccc
tcacaaagcacagtacagaacagcccatcatctgatgagagccaggatcacaaagagagt
ttatccccaacgaaaggagttgaaaaacctgcacttatatcacagagcctacctttgtct
tcagagttggaaaaaaaacacactctacagcatgatgcttcctcccgtcaatctactgag
acccagtcattaagccacctccaaataccaaactcatttcagtgcaatctatgcccactg
tccctgccatctttccaaatgtggcaggaacatcagacaaggcacctgctcgcagctcag
tcgcaggtccaactccttcattctggcttcacagacagaacattgccatatatgatgctt
cactccaaccactccctcatggccagccaaatgctttcaggcgctatgacgcagttgcac
cctaatgccacaagtcccatgatttcacacttgaatagcacacaagttaagaattcactt
gctgacctgtctcaaagttccttgaagcagaactcaaagctaatgtcagagggcagtttt
gatattcaaagatataacagagaggctgaggaagagcatagaagggataagcgtcagaga
accaccatcaccccagaacagcttgaagtgttgtatcaacgttacagcttggactccaat
cccaccagaggagtcctagagggtattgcccaggacgtgggcctcacaagaagagtggtt
caggtctggtttcaaaacacacgggcaagagaacgaaaagggcagttcaggtcaatgggc
ccaggatctggtttcagcatggccttaaaccatctccgctgtccattttgcagggctctc
tttaaggtgaagagtgctctggatgcccatataaggtcgcgccactgggcagaggctgaa
agagcaggctacaacttgtcaatgaataactgttctagtgggcccaatgggatggctatg
tcttcggtcatggacaaagcaggcccatctctctcctgtcacatcatcccaaacactggc
attggtataagcaacaaagagcaaacagtcaaacctgttacatttctgtcttcaaccatt
gatccgaacaacccaggggagtatgatgactttgacgaagacgatgaggagttccaatgt
gaagagggttcaagtatggctaaccaagggctgccgagtcctgatggctcagggggtcaa
agttcagactggggagagactctgcagccacaccaacatcagcagcaacgccaaaggaca
cagatgagccactttcaaatactccaacttaaagacttctacaagagccaccgtacacca
aatcgacatgagtgcgaggcactcgggcgggaattaggactgccccaccgtgttgtgcag
gtatggttccagaatgccagagccaaggagaagagggcaagaactttgagctccgactct
gcagacagagagcaggcggagctgacacccggcgcaggggagagagaccgggcttaa
DBGET
integrated database retrieval system
