Syngnathus scovelli (Gulf pipefish): 125970230
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Entry
125970230 CDS
T08785
Name
(RefSeq) myoblast determination protein 1 homolog 1
KO
K09064
myogenic factor 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125970230
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Myogenic transcription factors
125970230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Basic
Myf5
HLH
Motif
Other DBs
NCBI-GeneID:
125970230
NCBI-ProteinID:
XP_049578246
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All DBs
Position
6:19851575..19854946
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AA seq
308 aa
AA seq
DB search
MELSDMQFNMAPCPGCPGDDFYDDPCFDTSDMRFFEDLDPHLDPRMVHAAGLLQACKPDD
SSSSSSGSSHARDPDDDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATLRERRR
LGKVNDAFETLKRCTSANPNQRLPKVEILRNAIGYIEALQALLRAGGAGAAAGSPPTGDA
CYPLQVERYAADSDASSPRSNCSDGMADFSCPSSKRATFDANNFFSDDSSNGVKRERASV
VSSLDCLSSIVERISTDTSVASGSNADAPGVAPTEAPADADAPADAPSAPPGDSADHQRD
ANLIYQVL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtcggacatgcagttcaacatggcgccctgtccgggctgcccgggcgacgac
ttctacgacgacccgtgcttcgacacgagcgacatgcgcttcttcgaggacctggacccc
cacctggatccccgcatggtgcacgcggcgggcctgctgcaggcctgcaagccggacgac
tcgtcttcgtcgtcgtccgggtcttcgcacgcacgcgacccggacgacgatgagcacgta
cgcgcccccagcggccaccaccaggcgggccgctgcctgctgtgggcgtgcaaggcgtgc
aagcgcaagaccaccaacgccgaccggcgtaaggcggccacgctgcgcgagcgccgccgc
ctgggcaaagtcaacgacgccttcgagacgctcaagcgctgcacgtcggccaaccccaac
cagcggctgcccaaggtcgagatcctgcgcaacgccatcggatacatcgaagcgctgcag
gcgctgctgcgcgcgggcggggccggcgccgccgccggctccccgcctacgggcgacgcc
tgctacccgctgcaagtcgagcgttacgccgccgactcggacgcctccagcccccgctcc
aactgctccgacggcatggcggacttcagctgcccttcgtccaagcgagccacgtttgac
gccaacaactttttcagtgacgacagcagcaacggtgtcaagcgcgagcgtgcgtcggtg
gtctccagcctggattgtttgtccagcatcgtggagaggatctccaccgacaccagcgtc
gccagcggcagcaacgcggacgcgcccggcgtcgcgcccaccgaagcgcccgcggatgcg
gatgcgcctgccgacgcgccgtcggccccccctggcgacagcgccgaccaccaacgggac
gccaacctcatctaccaagtcctatag
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