Syngnathus scovelli (Gulf pipefish): 125970245
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Entry
125970245 CDS
T08785
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125970245 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125970245 (rexo1)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-60S particles
RNases
125970245 (rexo1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
125970245
NCBI-ProteinID:
XP_049578276
LinkDB
All DBs
Position
10:1321368..1327907
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AA seq
1214 aa
AA seq
DB search
MLRSTGFFRGLDCPFYAEYVEGKGSGNGCNRPYCHFRHSQQRRQTYECAAVETNKTHAAQ
KEQGYDPFKPEVVRPQEHRNGTLPQSSDFTGALEMVNKAIEEVRNEVEREKKKLCQIGDE
PYNPSGRTSASSSEGVKSQTAATHLAYDPGNHLMTSGGYNPSPGSSKYTLDSGSRGSNSN
SMEYVPTLVKKAPSRTHTQRVPSPPPSPKYSSKTPSSTCKYTLDTSKPSTDMEYDPLSNY
TAGIAAKRKSDGAVCNIITKGKKTQRLRASDDAIFPSVSKAQRQSVDTNKYTISDSDAES
SGTEYRPTSLSSLQQKKVNSLTKVGDSVGKERKEVAKGAPEAPAQRNKEHLETGEKLGPE
KKKIRIEKSEKAKINQTFLVKKSSKDKGKESLKKSEKKDQTKKENKSHGEKKDTVKVKTP
DKEHKRNDEKIHSKTNSSKRDKEMENRAKESGKSKEQSKQKERKHKNGQLQATKRDKDGR
NLSKSSSSTTSAKSKATSAISKEKMKHSATKNTKSPKQRTLSHADLFGDESAEEAEPMGP
DDDDESEEAPPVRKSADALKRGQLTMRKAFELTLSFSEDEDDGAPAGSAAEPDATIDLTL
FQDDFDFDSDPMEECLRIFNESKDVKKEDKGRQAKQPSRDLEEDPTESTLTTLFPGQKKR
VSHFAAKPNTDAPSKNVVRPHRRPTAQEVCYQRLQLAQQQAAQLAASVKPQSTPSSGSSG
EKKRIAHRPNPLTISSKATSSQDAKAGGSLPVKSQTTAGILSKTTSTVAQKRVAHTPTLK
SSSMKRPIIPVDFGAKVPNIIRQRYLNNFIDECIKFCPSEDVAFQMGLDEEKLVYDRSNT
KKIYVNLAVNTLKKLRNSSSSSSSSRSSPAIKEVALPPSRKAQSHQEVLGGRLAATTSFT
VNRMGRQLEEKLHGASFYRKLKAYLMTEEQLQEHGYPRLNPNATGKAVIYNLPEKKAVTD
PFTKICCRCGAEYQVNVKGNCIRREECAFHWGRLRRQKVAGGWETMYSCCSGAVGSPGCQ
MAQQHVQDGRKESLDGFVTTFSKALPGDGNGGVFALDCEMCYTKQGLELTRVTVINSDLK
VIYDTFVKPESKVVDFNTRFSGVTAEDLDGTTITLRDVQAVLLSMFSAESILVGHSLESD
LLALKLIHSSVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDSVEGHDSSEDAAACME
LMMWRLKEDAKVKR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatcaaccggcttctttcgtgggcttgactgtccgttttacgccgaatacgtt
gaaggcaaaggcagcggcaatgggtgcaacagaccctactgtcacttcaggcatagccag
caaagacggcagacctacgagtgcgctgctgtcgaaactaataagacccacgccgcccaa
aaagaacaaggttatgaccccttcaaacctgaagtcgtgcgacctcaagagcatcggaat
ggaactttgcctcagtcgagcgacttcaccggtgctctggagatggtcaacaaggccatc
gaggaggtccgcaatgaagtggagagggagaagaagaagctgtgtcagattggggacgaa
ccatataatcccagtggaaggacgagtgcatcttcctctgaaggtgttaaaagtcaaaca
gcagctacacacttggcctacgatcccggcaatcatctaatgacgtcaggagggtacaac
cccagccctggtagcagcaagtacactctggattcgggcagtcggggaagcaatagcaac
tccatggagtatgttcccactttggtcaaaaaggctccatctcggacacacacccagaga
gtcccctctccgcccccaagtccaaaatactccagcaagacaccttcctcaacttgtaaa
tacaccctggatacttcgaagccatctacagacatggaatacgacccgctctccaactac
acggcagggattgcagcaaagcggaagagtgacggcgccgtgtgcaatattatcaccaag
ggcaaaaagacacaaagactgcgcgcgtccgatgacgccattttcccgtctgtgagcaaa
gcgcagcgacagagcgtcgacacaaacaagtacaccatctccgactctgacgccgagagc
tctggaaccgagtaccgaccgacttcgcttagtagtcttcaacagaaaaaagtcaacagc
ttgacaaaagttggagacagcgtgggcaaggagaggaaagaggtggctaaaggtgcccca
gaagcaccggcacagaggaataaggagcacttggagacgggggaaaagttaggcccagag
aagaaaaagataagaatcgagaaatccgagaaagcaaaaataaaccaaacgtttcttgtc
aaaaaaagtagcaaggataagggcaaagagtctctgaagaaatctgagaaaaaagaccag
acaaaaaaggaaaacaagagtcacggtgagaaaaaggacaccgtgaaagttaagactcct
gataaagagcacaaaagaaacgatgagaagattcattcaaaaacaaactccagcaaacga
gataaggagatggaaaaccgcgcaaaggaaagcggcaagagcaaggagcaaagcaagcag
aaggaaaggaaacataaaaacggccaactgcaggccactaaaagagacaaggatggaagg
aatctgagcaaaagcagctcttctaccaccagtgcaaagagcaaagccacttcggccatc
agcaaagagaaaatgaaacacagcgccactaaaaacacaaaaagccccaaacaaagaacc
ctgagtcacgcggatctttttggcgacgagagcgcagaggaggcggaacccatgggaccg
gacgacgacgacgagtcggaagaagcgccgcccgtgaggaaatccgccgacgctttgaag
aggggacaactcactatgaggaaagccttcgagctgactctgtctttctccgaggacgag
gacgacggagccccggcagggagcgccgccgagccagacgcgaccatcgacttgacgctt
ttccaagatgactttgactttgactcggatcctatggaagagtgtttgcgcatcttcaac
gaatccaaggatgtcaagaaggaagacaagggaaggcaagccaagcagccatccagagat
ttggaggaggaccccactgagagcactttaaccactctcttccctggtcagaagaagaga
gtctcacactttgctgccaaaccaaatacggatgcaccttcaaagaacgtggtccggccg
cacaggagacccacggctcaggaggtttgctatcagcgcttgcaattggcgcagcagcaa
gctgctcagcttgccgcttcagtcaaaccacagagcacacccagcagtggctcttcagga
gagaagaagaggatcgcacatcgtcccaatcccttgacaatatcctccaaggccacaagt
tctcaagatgccaaagcaggtggaagcctgcccgtgaagagccaaaccacagccggtatc
ttgtcaaagaccacgtccaccgttgcacaaaaacgagtggcccacacacccaccctcaag
agttcttctatgaagcgtcccatcatccctgttgattttggggccaaagtccccaacatt
attcgccagcgctacctcaacaatttcatcgacgagtgcatcaaattttgcccgtcggag
gatgttgctttccagatgggccttgacgaggaaaaactagtctatgaccgcagcaacacc
aagaaaatctatgtcaatctagcggtcaacacgctgaagaagctccgtaacagcagcagc
agcagcagcagctctcgctcctcgcctgccatcaaggaggtggctttacctccttcgagg
aaagcccagtctcatcaggaagttctgggaggtcgtctcgcagctaccaccagtttcact
gtcaataggatgggtagacagctcgaggagaagctccacggagcatcgttttacaggaag
ctgaaggcatatttgatgacagaggaacagctgcaggagcacggatacccccgattgaac
cccaacgcgacagggaaggccgttatatacaacctcccagagaagaaggccgtcacggac
ccgttcaccaagatatgctgccgatgcggtgccgagtaccaagtcaacgtcaagggtaac
tgtattcgcagggaagagtgcgcttttcactggggacgtttacgcaggcagaaagtggct
ggaggctgggagaccatgtacagctgctgctccggggccgtgggctcgccaggctgccaa
atggcccagcaacacgttcaagatgggcgcaaggagtcattagatggttttgtgaccacc
ttcagcaaagctctcccaggagatggcaatggaggagtgtttgccttggattgtgaaatg
tgttacacaaagcaaggcctggagctgacgagagtcacggtcattaactccgacttaaaa
gtcatctacgacacatttgtcaaacctgagagcaaagtggttgactttaacacacgattt
tccggcgtgacggcagaggacttggatggtaccaccatcaccttgagagatgttcaggct
gtgctgctcagtatgttcagtgccgagtccatcctggtgggacacagcttggagagtgac
ctcctggctctgaagctgattcacagttcagtggtagacacagccatcgtgtttcctcac
cgacttggtttaccctacaaacgtgccttgaggaatctgatggccgactacctcaaacgc
atcattcaggacagcgtcgaaggccacgactcgagcgaagatgccgccgcctgcatggaa
ctgatgatgtggaggctgaaggaggacgcaaaagtcaagagatga
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