Syngnathus scovelli (Gulf pipefish): 125970262
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Entry
125970262 CDS
T08785
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125970262 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125970262 (taf3)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125970262 (taf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_UBR7-like
PHD_5
PHD_2
Motif
Other DBs
NCBI-GeneID:
125970262
NCBI-ProteinID:
XP_049578321
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All DBs
Position
6:20165806..20171694
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AA seq
914 aa
AA seq
DB search
MCESYGRSLLRVSVAQICQALGWDAVQLTACDLLADVLQRYIQQMGRVCHRYSELYGRTD
PVLDDVSQAFRLLGVSLSELDDYVNNLEPVAFPQQLPTFPVAKNNVLQFPQPGAQFAEER
RDYIPDYMPPLVSLQEEEEEEVLPDTGTSAEAMQVAMEEDEDDEDEAVNDENHPLKRPLD
SPDEALGMMPTSKRPRGLSGLSPEWAAEPREPLTSLNPQRVPPPGMLPSHDDLEPPSPES
PAGAPPSFRPQPPVGKYPDPKALGGGAAAAARKPKVSSPGRQRTKSPKGLVPASGSGALV
HSPPKTSKERKKSPGRTKSPKSPKSPKVLVVAKAPQPLSGRVDGVHKPPPPPLSGKENIH
LRHDGKEPDRGPLLKAEPGNGAIEDSISAVIAKACSERQPDPFAFSSGSDSDSNGFSSPR
RLTIMEPVAPKAPPGATGLSATGLSAPGATGLSAPLHLQPGPGKWTLDDSIDEVIRKAHR
GGPPAQTPERREDVSSGSASPPTPEPLLKAFQEKSKLAADVKKKLKKELKSKLKKKEKPK
DKEREKDKSKGKDKMKEKNKSKDPSKDGKMLWKDGELPGQRDFALAADGAVKLKSRDGDG
KKDRDKHKDKKKDKGKKDKEKKDKGKDKSKEERQKQGGAPAELAGLFGQRPLAPPAPSVP
VLLQDAKSKDKKKDKKEKKKKKEKERERLKEKERDKEEKRKDKDKRDKERDKERLRLEKV
KAADSTPLPPPPPVPVLPSPVIPRLTLRVGGQDKIVISKVLPNSEAKSPAPKTPASKSTP
VGRPRSPPPPILLPACTGAGSPPPPPAPAPSLLSAAMPLSSPASLKMPVRSVVTETVSTY
VIRDESGNQIWICPGCDKPDDGSPMIGCDDCDDWYHWVCVGIVAAPPADQQWFCVKCSCK
KKDKKHKKKKHKPH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctatggccgctcgctgctgcgtgtgtcggtggcgcagatctgccaggct
ctgggctgggacgccgttcagctaaccgcctgcgacctgctggccgatgtgctgcagcga
tacatccagcagatgggccgcgtctgccatcgctactcggagctgtacgggaggacggat
cctgtcctggacgatgtgagtcaggctttccggctgctgggcgtgagtctgagcgaattg
gacgactatgtcaacaacctggaacccgtggccttcccccagcagctgcccaccttcccc
gtcgccaagaacaacgtcctgcagttccctcagcctggcgcgcagttcgccgaagagcgc
agggactatattcccgattacatgccgcctctggtctccttacaagaagaagaggaggag
gaggtccttcccgacacgggcacctcggccgaagccatgcaggtggccatggaggaggac
gaggacgacgaggacgaggcggtcaacgacgagaaccacccgctcaagaggcccctggac
agccccgacgaggcgctgggcatgatgcccacgtccaagcggccgcgcgggctctccggc
ctcagccccgagtgggccgccgagccccgggagcccctcacctccctcaaccctcagcgc
gtgcctcctccgggcatgctgccttctcacgacgacctcgagccgccgtcgcccgaaagc
ccggccggggctccgccctccttcagacctcagcctcccgtcggcaaatatcccgatccg
aaggccctcggcggcggtgccgccgccgcggccagaaagcccaaagtctcgtcgcccggg
agacaaaggactaagtccccgaaggggctcgttcccgcctcgggcagcggcgctctcgtt
cattccccccctaaaacgtccaaggagaggaagaaatccccaggcaggacaaagagtcca
aaaagtcccaaaagccccaaggtgctggttgtggccaaagctcctcagcccctgagtggc
agggtggacggcgttcacaagccgccaccgccgcccctgtcgggcaaagagaacatccac
ctgcggcacgacggcaaggagcccgatcggggccccctcctcaaagcggagcccggcaac
ggcgccatcgaggactccatcagcgccgtcatcgccaaggcgtgttcggagcgccagccc
gaccccttcgccttctcctcgggctccgactcggacagcaacggcttctccagccccagg
aggctgaccatcatggagccggttgcgcccaaagccccgccgggcgcgaccggcctctcg
gcgaccggcctctcggcgccgggcgcgaccggcctctcggcgccgctccacctgcagccg
ggccccggcaagtggaccctagacgactccatcgacgaggtgatccggaaggcgcaccga
ggcgggcctccggcccagacgcccgagcgccgagaggacgtctcgtccggctcggcctcg
cctcccacgcccgaacccctgctcaaggcgtttcaggagaaaagcaagctggcggcggac
gtgaagaagaagctgaagaaggagctgaagagcaagctgaagaagaaggagaagcccaaa
gacaaggagcgggagaaggacaagagcaagggcaaagacaagatgaaggagaaaaacaag
agcaaagacccgtccaaggacggcaagatgctgtggaaggacggcgagctcccaggccag
cgggactttgcgctggccgccgacggcgccgtcaagctcaaaagcagggacggagacggc
aagaaagacagggacaagcacaaagacaaaaagaaggacaagggcaagaaggacaaggag
aagaaagacaagggcaaggacaagagcaaggaggagaggcagaagcaaggcggggcgccc
gccgagctggccggcctcttcggccagcgcccgctggcgccgccggcaccctccgtgccc
gtcctcctccaggacgccaagagcaaagacaagaagaaggacaagaaggagaagaagaaa
aagaaggagaaggagcgagagaggctcaaggagaaggagcgcgacaaggaggagaagagg
aaagataaggacaaacgggacaaggagagagacaaggagagactccgattggagaaggtg
aaggccgccgactccacgccgctgccgccgccgccgccggtgcccgtgctcccctctccg
gtcattcccaggctgacgctgcgagtgggaggccaggacaaaatcgtcatcagcaaggtg
cttcccaactcggaagcaaaatctccagcccccaagacgcccgcctccaagtcgactccc
gtcggtcgtccccgctcgccgccgcctcccatcctgttgccggcgtgcacgggggccggc
tcaccgccgccgcccccggcccccgcgccctcgctgttgtcggcggccatgccgctgtcc
tcgcccgcctccctcaagatgcccgtacgcagcgtggtcaccgagacggtcagcacctac
gtgattcgagacgaaagcggcaatcagatctggatctgtcccggatgcgacaagcccgac
gacggcagccccatgattggctgcgacgactgcgacgactggtatcactgggtttgcgtg
ggaattgtggcagcgccccctgcggaccagcagtggttttgtgtcaaatgttcctgcaag
aagaaggacaaaaaacacaagaagaagaaacacaaaccgcattaa
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