Syngnathus scovelli (Gulf pipefish): 125970268
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Entry
125970268 CDS
T08785
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125970268 (cdhr5b)
Cell adhesion molecules [BR:
sscv04515
]
Cadherins
Cadherin related
125970268 (cdhr5b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
125970268
NCBI-ProteinID:
XP_049578343
LinkDB
All DBs
Position
6:20065184..20071314
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AA seq
764 aa
AA seq
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MEASKNFFFSVLLLTSLTITQAQELCSAPETVNVQENNTVGHQVETIAVLDGVVPSLKNA
ADVPFILEGNRLLANAVLDYETVKRYVVMVTCRRPPAQQYELVMVVRVLNVNDNPPEFDM
KTYQIPTEELLAVGTAVGQFPAKDADEGTTLYYTLTSPSDYFRLASPENPQLVIQNILDY
DKVQTVQMVLQAQDTPLSGSGAEVSFTATATIQVNVVDVDNRPPWFQPCNKHVVAGVIIC
HNTGYTGSVDLNQMQAEPLTLKPGPLHAIDGDAGINEAMVYSFLSGNEDGLFDINPNTGD
VTMLRAIDVLGTISLTVLAAQTPSSSQFATTSLTLSVQVKSLHKPKLQRAEYQGVISSAG
AMATDPTNKDEPLQIVALDEDYASVGGINPHIVYRVIGSDDFSIINGYLFMTKDRPEDTL
SLQVEAEDASNGENSIASLSVQVKSGLTTTALPLSSTTDTVTTPPTTAQAESTTNPSEST
TDSGTSTGGKTTETMESTTDPGTPSTGTSQSATVATESSVTPLSTDGATSPVEPNTEKVP
IPPSGFEPGDMAALGATLGVLLFACVVIIGVLVCRLQKGKADWRKIHEASVFRSSLGQGF
GGEKQGVQYTNEAFQHDDDSDGGGGGAGFGAPYVTASEEGPAAAAANNSAIESGVRALGT
LLGDDNVSQTSSDKEREVKPILTKERRQEEGYKAVWFKEDIDPDAKEEVVIIPDSREDDS
EDDNGPAKAPKVGFADTDLDSGLGVKMEDPEEGSEGDDVLNVDL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcaagaacttcttcttttcggtgcttttgctcacctctttgaccatcaca
caggcccaggagctttgtagcgctcccgaaacggtcaacgtgcaggagaacaacacggtg
gggcaccaagtggagaccatcgctgtgctcgacggggtggtgccctcgctgaagaacgcc
gccgacgtgcccttcattctggaggggaacaggctgctggccaacgccgttctggactat
gagacggtaaaacgttacgtggtcatggtgacgtgcagaaggcccccggcgcaacagtac
gagctggtcatggtggtcagagtgctcaatgtgaacgacaacccgccagagttcgacatg
aagacgtaccagatcccaacggaggagttgctcgccgtggggacggccgtgggccaattt
ccagccaaggacgccgacgagggcacgacgctttactatacgctgacatcaccatccgat
tactttagactggcgtctcccgaaaacccgcaactggttatccagaacatcctggactac
gacaaagtccaaactgttcagatggtcttgcaagctcaggacacgccgctgtcgggttcg
ggtgccgaggtctccttcaccgccacggccaccattcaagtcaacgtggtggacgtggac
aacagaccgccctggttccagccctgcaacaaacacgtggtggccggcgtcatcatctgc
cataacaccggctacaccggcagcgtggacctcaaccaaatgcaggccgaacccttgaca
ctgaagccgggtccgcttcacgctattgacggcgacgccgggatcaacgaggccatggtt
tactccttcctgagcggaaacgaggacggactgtttgacatcaacccaaacaccggcgac
gtcacaatgctgagggccatcgacgtgttggggaccatcagtctgacagttctggccgcc
cagacaccgagcagttctcagtttgccaccaccagcctcacgctcagtgttcaggtgaag
agcctccacaaaccaaaactccagagggccgagtaccagggcgtgatctcttcagcgggc
gccatggcgacagacccgaccaacaaggacgagccgcttcaaatcgtcgccttggacgag
gattacgccagcgtggggggaataaaccctcacatcgtctatcgcgtcatcggaagcgac
gacttctccatcattaacggctacttgttcatgaccaaagaccgcccggaggatacctta
tctctgcaggtggaagcggaggacgcgtccaacggggagaattcaatagcgtcgctctcg
gtgcaggtgaaatcaggtctcaccactactgctttgcctttgagcagcactactgacacg
gtgaccacccccccaaccacagctcaagcagagtccaccaccaaccccagcgagtccacc
accgactctggtacttccactggaggcaaaaccactgaaacgatggagtccaccaccgat
cccggtactccctcgacaggcacgagccaaagtgctacggtggcaacagaatcgtcggtg
acgccactgagcaccgacggggccaccagccctgtggagcccaacacagagaaggtgcct
atcccgccgagtggctttgagccaggggacatggcggcgctgggggcgactctgggcgtt
cttctcttcgcctgcgtggtcatcatcggagtcctcgtctgtcgcctccagaagggaaaa
gccgactggaggaagatccacgaagccagcgtcttcaggagctccctgggccaaggcttc
gggggtgagaagcagggcgtccagtacaccaacgaggctttccagcacgatgacgacagc
gacggcggcggcggcggcgcgggcttcggcgctccgtacgtcacggcgtcggaagagggg
ccggcggcggcggcggcaaacaactcggccatcgagtccggcgtgagagcgctgggcacc
ctcctgggcgacgacaacgtcagccagaccagctcggacaaggagagggaggtgaagccc
attctaaccaaagaacggcgccaggaggaaggctacaaggccgtttggttcaaggaggac
atcgaccccgacgccaaggaggaagtggtcatcatccccgacagcagggaagacgacagc
gaggacgacaacggccccgccaaagccccaaaggtgggcttcgccgacaccgacttggac
agcggactgggagtgaagatggaggatccggaggagggctcggaaggtgacgacgttctg
aacgtcgatctttga
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