Syngnathus scovelli (Gulf pipefish): 125970277
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Entry
125970277 CDS
T08785
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125970277
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125970277
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
125970277
NCBI-ProteinID:
XP_049578367
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Position
6:20172503..20188758
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AA seq
584 aa
AA seq
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MGGAARASEGAREGRKWAGCTPGRNEQVSESKAEQDRSAPVRPSVRPFVPVFAQVDLLLS
PPAMLEHSSELALVQSLYANSMRCPPVVRSEDLPMSNGMKMNGSSEHLDQPDPDSIKMFV
GQIPRSWSETELKELFEPFGAVHQINILRDRTQNPPQSKGCCFVTFYTRKAALDAQNALH
NIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEVRMMFSSFGQLEECRIL
RGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKFADTQRDKEQRRLQQQ
LVQQIQQLNSASTWGNLAGLGSLTPQYLALLQQAASTSNQSSFNSMQRLGVNPLQLQNLA
TLAAAAAAAQSSASPTSSAGLSAATGALGALASPAGSTAGSGASAAMNTLASLGTLQGLT
GASVGLGNLNALAGGGMGALNGGLGSSMANGSAATSMDALSQAYSGMQQYAASALPSLYP
QPLLQQSIPGHQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK
CFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggctgctcgagcgagcgagggagcgagggaaggaaggaagtgggccgggtgc
actccgggacggaacgagcaagtgagcgagagcaaagccgagcaggacaggagcgcgcct
gtccgtccgtccgtccgtccgttcgtccccgttttcgcccaggtggatcttttgctgtcg
cccccagccatgttggagcactcctccgagctggctctggtgcagagtctgtacgccaac
agcatgcgctgcccccccgtcgtcaggagcgaggacctgcccatgagcaacggcatgaag
atgaacgggtcgtcggaacacttggatcagccggacccggactccatcaagatgtttgtg
gggcagatccctcgctcctggtcagaaacggaactcaaggagctttttgagcctttcgga
gccgtgcaccagatcaacatcctccgcgatcgcacgcagaacccccctcagagcaaagga
tgctgttttgtaactttttatacaagaaaggctgcgctggatgcccagaacgccctgcac
aacatcaagaccttaagtgggatgcatcatcccatccagatgaaaccagccgacagtgag
aaaaccagcgccgtggaagacagaaaactcttcatcggaatggtttccaagaaatacggc
gagaacgaggtcaggatgatgttctcgtccttcggccagctggaggagtgccgaatcctg
cgcggacccgacgggcagagccgaggctgtgcgtttgtcacatttgctaccagggcaatg
gcacagaatgcaatcaaaaccatgcatcactctcagactatggagggctgctcttcgcct
ctggtggtgaagtttgccgacacgcagcgggataaggagcagcgtcgtctgcagcagcaa
ctggtgcagcagatccagcagctcaacagcgcctccacctgggggaacctggccggcttg
ggcagcctcacgcctcaatacctggccctcctgcagcaggctgcttccacaagcaaccag
agcagcttcaacagtatgcagcggctcggggtgaaccctctccaactgcagaatttggcc
acattagccgcggcggcagccgccgcgcagagttctgccagtcccacctcgtccgccggc
ctgtcggccgccaccggcgcgcttggagctctggccagcccagccggctcaacagcgggt
tccggtgccagcgccgccatgaacacgttggcgtctctgggtaccttgcagggtctcacc
ggggcctccgtcggcctcggcaacctcaacgctctcgccggcggcggtatgggggccctg
aacggcggcctgggctcgtccatggccaacggctcggcggccacgtccatggacgcgctg
agccaggcctactcggggatgcagcagtacgccgcctcggccctgccctcgctctacccc
cagccgctcctgcagcagagcatccccggccaccagaaggaagggcccgagggcgccaac
ctcttcatctaccacctaccgcaggagtttggcgaccaggaccttctgcaaatgttcatg
ccctttgggaacgtggtttcggccaaagtcttcatcgacaaacagaccaatttgagcaag
tgctttggcttcgtcagctacgacaatcccgtctctgcgcaagctgccatccaggccatg
aacggcttccagattggaatgaagcggctgaaggttcagctgaagcgttccaagaacgac
agcaagccctactga
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