Syngnathus scovelli (Gulf pipefish): 125970293
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Entry
125970293 CDS
T08785
Name
(RefSeq) shaker-related potassium channel tsha2
KO
K04879
potassium voltage-gated channel Shaker-related subfamily A member 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125970293
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125970293
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125970293
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
125970293
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Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
DUF423
Motif
Other DBs
NCBI-GeneID:
125970293
NCBI-ProteinID:
XP_049578408
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Position
6:20130462..20133019
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AA seq
460 aa
AA seq
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MTVVSQENRDETAAVTPLLEEQECSERVVINISGLRFETQVKTLSRFPSTLLGDPRKRMR
FFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVSVPVDIFLEEIKFYEFDEETIELFR
DDEGLSREEDRPLPNNEFQRQLWLLFEYPESSGPARIIAIVSVMVILISIIIFCLETLPE
FREVPASGGQEELHVNGSGHGKVRSPFTDPFFMVETLCIVWFSFEFTMRFLSCPSKAAFF
KNIMNIIDVVAIAPYFITLGLDLAEHQGSSQQAASLAILRVIRLVRVFRIFKLSRHSKGL
QILGQTLHASLRELGLLIFFLIIGVVLFSSSVYFAEAEDPESGFSSIPDAFWWAVVTMTT
VGYGDMCPSTIGGKFVGSLCAIAGVLTIALPVPVIVSNFNYFYHRENDEEDRLQFVHVTC
GQPQTSSGDERSLSKTESYREDDLESLTQIQIYTGKLTDV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggtgtcccaggagaaccgcgacgagacggcggcggtcactcccttgttggag
gagcaggagtgtagcgagagggtggtcatcaacatctcgggcctgcgcttcgaaacccaa
gtcaagaccctctcgcgcttccccagcacgctcttgggggatccccgcaaaaggatgcgc
ttcttcgacccgctgaggaacgagtacttcttcgacaggaaccggcccagctttgacgcc
attctgtactactaccagtccggggggaggctgcgcagaccggtgagcgtccccgtggat
attttcctagaggagatcaagttctacgaatttgacgaggagacgatcgagctttttcga
gacgacgagggtctgagcagggaggaggaccgacctctgcctaacaacgagttccagaga
caactctggctcctgtttgagtatccggaaagttccgggcccgctcgcatcatcgccatc
gtctccgtgatggtcattctgatatccatcatcattttctgcttggagacgttgcccgag
tttcgcgaggtccccgcgtcgggggggcaggaggagctccacgtcaacggcagcggccac
ggcaaggtgaggagtcccttcacggaccccttcttcatggtggaaacgctctgcattgtg
tggttctcctttgagttcaccatgaggttcctgtcctgccccagcaaggcagcattcttc
aagaacatcatgaacatcatagacgtggtggccatcgcgccgtacttcatcaccctggga
ttggacttggccgagcaccagggcagcagccagcaggccgcctcgctggccatcctgagg
gtcatccgtctggtccgcgtttttaggatttttaagctctccagacactccaagggtctt
cagatactcgggcagaccctgcacgccagcctcagggagctgggcctcttgattttcttc
ctcatcatcggggtggtcctattctccagttcggtgtattttgccgaagccgaggacccc
gaatccggcttctccagtatccccgacgccttctggtgggcggtggtgactatgaccacg
gtgggctacggagatatgtgccccagcaccatcgggggcaagtttgtaggatccttgtgc
gccatcgccggagtgctgaccatcgctctacccgtgcccgtcatcgtgtccaacttcaac
tacttctaccaccgagagaacgacgaggaggatcgcttgcagtttgtgcacgtgacctgc
ggacagccgcagacgtcgtccggggacgagcgctccctgtccaagaccgagtcctaccgg
gaggatgacttggagagcttgacccagatccaaatctacaccgggaagctgactgacgta
tga
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