Syngnathus scovelli (Gulf pipefish): 125970314
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Entry
125970314 CDS
T08785
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125970314 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
125970314
NCBI-ProteinID:
XP_049578449
LinkDB
All DBs
Position
10:2476988..2501530
Genome browser
AA seq
2499 aa
AA seq
DB search
MERLPGFSSGTSLVFVLTFLHLSQALQCVDDKAPCVNNATCQTFSNGTGYCRCAPGFLGE
YCHHKDPCHPGFCSNGGNCSVSLLAGVPVPGSATCVCPLGFIGEYCDIQQNSTCHPDNPC
ANEGKCTLLSLDKYTCKCARGWAGQRCEHEDSCLSSPCANGASCRALPGGKYICSCPPGY
AGPRCLNDTDECVASPTKCQNEGTCINTPGSYRCICGAGFTGRHCESSYVPCSPSPCLNG
GTCHQNSETSYSCHCLPGFNGTNCENNIDDCPGHQCENGGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCNNLAGSYVCVCVNGWSGPDCSENIDDCATAACTQGSTC
IDRVASFICLCPHGKTGLLCHIDNACMSNPCREGSQCDTNPITGMFHCNCPAGYVGSTCT
NDRDECSIGSNPCEHGGQCVNTDGSFMCNCVRGYAGPRCEQDVNECASSPCQNDGTCLDR
IGDYTCICMPGFEGTHCEIEVNECLSSPCLNQGKCLDQVSRFVCECPAGFSGETCQIDID
ECSSTPCLNGAKCIDRPNSYDCECAEGFTGLLCEDNINDCQPEPCHHGVCKDGIATFSCE
CDPGYVGSICNIQVQECHSNPCQNRGRCIDLVNAYQCNCPPGTSGVNCEINEDDCDSNPC
EYGECQDGINEYKCVCSPGYTGLRCDVDINECASNPCMSGGTCMDKVNGFHCLCPPSTHG
PLCLSGIDHCEHQPCEHGQCIEQQHGYNCECEPGWGGQHCEQEKDECQPNPCQNGGSCLD
RHNGYTCVCQLGFRGVNCEKNIDECASNPCFNQGICIDRVNGYTCQCSPPFTGKNCKDEL
APCASHPCERGGVCRPTADYSSYTCRCPAGWQGPRCTEDVNECKKNPCRNGGRCVNSPGS
YMCKCQPGYSGHNCQTDVDDCSPNPCLNGGSCVDDVGGFACECRQGFAGGRCETEINECA
SRPCWNGANCRDYVNSFVCECRAGFDGFLCEHNIQECTESSCLNNGTCIDDINTFSCRCR
PGFYGNFCEYEQNECDSQPCKNGGTCTDGLGTYRCTCPVGYNGQNCQNFVNLCSQVRCHN
GGSCSQTSTSWTCHCQMGWTGLYCDVPNMSCQDFAARNGLEVENVCKNAGRCVNVANSHQ
CQCQPGYTGSYCEDMVDECQSNPCRNGATCKDYQGTYECVCKPGYQGVNCEYDVDECHSR
PCLHGGTCINLINRFTCACPPGTQGLQCEMNVDDCAPKPGSWEPRCRNGGQCVDGIGRYT
CTCPPGFVGEHCEGDLNECLSGPCHAAGSLDCVQLVNDYQCRCRLGYTGRHCESVVDLCL
SKPCHNSGVCSMNMSSVHGYTCSCPPGFAGFNCGDLEGYSCAKLHCQNGGNCVESPVGQL
YCQCQPGFSGPHCESKQTCPTPCQNGGTCISDPSNPYLYSCRCPTHFSGRYCENQVSVPR
SPSCPYLQCEHQSGDKVCDTQCNNHECQWDGGDCSLNWKQPWVNCTASVPCWDYFKNGRC
DKECDNPGCLFDSFECQEHAPSTCKYDRYCPDHYGNLVCDWSCNTEACGWDGLDCAKDTP
AKVIEGTLVIVVRLQPKELIEDMRGFLRSLGALLHTNLKVKLDENKEPMVYPYYGPEEGH
GRLLQKGRSKREMEREVIGSVVHLQIDNRECAQKSEDCFSNTNEAASFIAAAHIKADLPY
PLVSVNSKSISQPGWSTRSDSRCSFLGDLTVQKMPTFPMYVIGVAVVIVLLIVVLGMLAA
KRKNKHALLWMPDGFLANKNDKRKEPVGQDDFDMKNFKSPDGTMMDGRQGQRWMDDEVPA
KIPRNEDKPLLMSSDGGVDRREWTLQHRKAADVILTPPQADGETNCLDVNVKGPDGFTPL
MLASLRNGGGPDCSFPGEEEEESGGDEPGPSVISDLIAQGASLMAQTDRTGETALHLAAR
YARADAAKRLLDAGADPNAHDNMGRTPLHAAVAADAQGVFQILIRNRATDLDSRMNDGTT
PLVLAARLAVEGMVEELIHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQ
DNKEETPLFLAAREGSFEAAQLLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYN
LVHSPHNGPNHIGGNSSVMCGANGAAFIGMRPGPQGKKSRRGGGKMGGVGGGTKEPKDMK
AKRRKKPTGGEGPGAGGGGGVNGVKAAGGLPESSVTMSPVDSLESPHSYTGDASGAATTT
ANSPPLMSSPGTRPMLPPVSHMLGQQQQQQQAWVGMSKHGYGGHMFGLVPHPMGGSHRGM
PQHHGHGGPMLTPMNVTMSREQLPPIVTFQMMPPGGGQGMMKQPQQAHVQVTQAQPQNPQ
SGPGHLRCSQALVYQMPEPMSMGLPHPMQHAVSHGGPLPSYPPMQSPVDKYPTPPSQHSF
TTPVSSDGTTPRHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLANGHHALP
SARHTHIPEQAQLQPQAQPPAQQRASQQPSALGSQQVFA
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atggagaggttacccggtttctcctcgggaacgtcgctagtcttcgtcctgactttcctt
cacctctcccaggctcttcaatgtgtagatgacaaagcgccatgtgttaacaacgccacc
tgtcagacctttagcaacggcaccggatactgcagatgcgcaccaggcttcctgggcgaa
tactgtcaccacaaggacccctgtcatcccggtttctgctcgaacggcgggaactgctcc
gtgagcttgctcgccggtgtccccgtcccgggtagcgccacctgcgtctgtcctctgggc
ttcatcggagagtactgcgacattcagcagaactccacgtgccaccccgacaacccatgc
gccaacgaaggaaaatgcactttgctgtccctcgacaaatacacttgcaagtgcgcccgg
ggttgggcaggacagcgatgtgagcatgaggacagctgcctgtcaagcccgtgtgccaat
ggcgcatcatgccgcgctttgcccggcggtaaatacatctgctcctgcccgcccggttac
gcgggtccccgctgcctcaacgacaccgacgaatgcgtggcctcccccacaaaatgtcag
aatgaaggcacgtgtatcaacaccccaggatcctacaggtgtatttgcggcgccgggttc
acgggtcgacactgcgagagctcctacgtcccttgctctccttcgccgtgtctgaacgga
ggaacttgccatcagaattcggaaaccagctactcgtgccactgtcttccaggcttcaat
ggaaccaactgcgagaacaacattgacgactgccccggtcatcagtgtgaaaatggcggc
acgtgtatggacggcgtcaacacctacaactgtcagtgtcctccggagtggacgggtcag
cactgcaccgaggatgtggacgaatgtcgtctccagcctaacacttgccagaacggcggt
acctgcaacaacctagccgggagctacgtttgcgtatgcgtcaacggctggagcggaccc
gactgttcggaaaacatcgacgactgcgccaccgccgcctgcacgcaaggctccacgtgc
atcgatcgcgtcgcttctttcatctgcctctgcccccatggaaagacgggtttgctttgc
cacattgacaacgcctgcatgagcaacccttgcagggaaggctcccaatgtgacaccaac
cccatcaccggaatgttccactgcaactgtccggccggttacgtcggcagcacctgcacc
aacgatagagacgagtgtagcatcggaagcaacccttgcgagcatggcggccagtgcgtc
aacacggacggctccttcatgtgcaactgcgtgagaggttacgccggaccacgttgcgaa
caggatgtcaacgaatgcgcgtccagcccttgccagaacgacggcacttgcttggaccgc
atcggcgactacacttgcatctgcatgcccggatttgaggggactcactgtgaaatcgag
gtgaatgagtgtctgagttccccgtgtctgaatcagggaaaatgcctggaccaggtcagc
cgctttgtctgcgagtgcccggcaggcttcagtggcgaaacgtgccagatagacatcgac
gaatgctcgagtacaccgtgtttgaacggagccaagtgcatcgaccgacctaacagctac
gactgtgaatgcgctgaaggcttcacaggtcttctttgcgaagacaacatcaacgactgc
cagccggagccgtgccaccacggcgtgtgtaaggatgggatcgccaccttctcctgcgag
tgcgacccgggatacgtgggctccatctgcaacatccaagtgcaggagtgtcacagcaac
ccttgtcagaatcgaggacgctgcatcgacctggtcaacgcctaccagtgtaactgccca
cccgggacttcgggtgtgaactgtgaaatcaatgaagatgattgtgacagcaacccctgc
gagtatggagagtgccaagatggcattaatgagtacaagtgtgtgtgctccccaggatac
acaggactcagatgtgacgtggacatcaacgagtgcgcctccaacccgtgtatgagcggc
gggacctgcatggacaaggttaacggcttccactgcctgtgcccgcccagcacccacgga
cccctgtgcctctcggggatcgaccactgtgagcaccagccttgcgagcacggccaatgt
atcgagcagcaacacgggtacaattgtgagtgcgaacccggctggggaggacaacactgc
gagcaggagaaagacgagtgccagcccaatccgtgccaaaatggcggctcgtgcttggac
cgacataacggctacacttgcgtgtgccagctgggattcagaggtgtgaactgcgagaag
aacatcgacgagtgcgcgtccaatccttgtttcaaccagggcatctgcatcgacagggtc
aacggttacacttgtcagtgtagtccgccgttcacaggtaaaaactgtaaggacgagctt
gccccttgcgcttcgcatccgtgcgaaaggggaggagtctgccgtcccacggcggactac
agttcctacacctgccgatgccctgccggatggcaagggccgcgctgcacggaggatgtc
aacgagtgcaaaaagaatccttgcaggaacggcggccgttgtgtcaacagcccgggcagc
tacatgtgtaaatgtcaacccgggtacagcggacataattgtcagacagatgtcgacgac
tgctcgcccaacccgtgtttgaacggaggttcctgcgtggacgacgtgggcggttttgcc
tgcgagtgccgacagggtttcgcaggcggtcgctgcgagaccgagatcaacgagtgcgcc
agccgaccctgctggaacggcgccaactgccgagattacgtcaacagtttcgtgtgcgag
tgtcgggcgggttttgatggattcctgtgtgaacacaacatccaagaatgcaccgaaagc
tcttgcctgaataacggcacgtgcatcgatgacatcaacaccttttcgtgccgctgccga
cccggtttctacggcaacttttgcgagtacgagcagaacgaatgcgactcccagccttgt
aagaacggcgggacctgcaccgacggcttaggcacctacagatgcacctgtcctgtaggc
tacaatggacaaaactgccagaactttgtcaacttgtgtagccaagtgcgctgtcacaac
ggcggctcctgctctcagacctccacctcctggacttgtcattgtcaaatgggctggact
ggactttactgcgatgtgcccaatatgtcctgccaggactttgctgcacgaaatggtctg
gaagtggagaacgtttgcaaaaacgcagggcgatgcgtgaacgtggctaattcccaccag
tgtcagtgccagccaggatacacgggcagctactgtgaagatatggtagatgaatgccag
tccaatccttgccgcaatggagctacttgcaaggactatcaaggcacatatgaatgtgtg
tgtaagccgggctaccaaggggtgaactgcgagtacgacgtggacgaatgtcactcgagg
ccgtgtctccacggaggaacgtgcatcaacctcatcaaccgcttcacctgcgcttgcccg
ccaggaacacaaggtctccagtgcgagatgaacgtggacgactgcgcgcccaagcccggc
tcgtgggagccgcgctgtcgtaacggcggtcagtgcgtggacgggatcggacgatatacg
tgtacctgcccgccgggatttgtcggagaacattgtgagggtgatctcaatgaatgcctg
tctggaccttgtcacgccgccggcagtctggactgcgtgcagctcgtcaatgactatcag
tgccgctgccgccttggatacaccggccgccattgtgagtccgtagtggatttgtgtctg
tccaagccgtgccacaacagcggcgtctgctccatgaacatgagctcagttcacggctac
acctgctcctgtccacctggctttgctggattcaactgtggcgatctggaaggctacagc
tgcgccaagctccactgccaaaatggcggcaactgcgtggagtcaccagtaggccagctc
tactgccagtgccaacctggcttcagcggcccgcactgcgagagcaagcagacgtgcccg
acgccatgccaaaacggcggaacgtgcatcagcgacccttccaacccgtacctgtacagc
tgccgctgcccgacgcatttctccgggcgctactgcgagaaccaagtgtcggttcctcgc
agcccttcctgcccgtatctccagtgcgagcaccagtcgggcgataaagtgtgcgatacg
cagtgtaacaatcacgagtgtcagtgggacggaggcgattgctcgctcaactggaagcag
ccttgggtcaactgcaccgctagcgttccttgctgggactattttaaaaacggacgttgc
gacaaggagtgcgacaaccccggctgcctcttcgatagcttcgagtgccaggaacatgcg
cccagcacctgcaagtacgacaggtactgtccggaccactacggtaacctggtgtgtgac
tggagctgcaacacggaagcctgcggctgggacggtctggactgcgccaaagacactccg
gccaaagtgatcgagggtaccctggtcatcgtggtccggcttcaacccaaggagctgatt
gaggacatgcgtggcttcttgcgctccttgggagcactgctccacaccaacctgaaggtg
aagctggatgagaacaaggagcccatggtgtacccgtattacggaccagaggaaggccac
gggcgcctcttacaaaagggcagaagcaagcgtgagatggagagagaagttatcggttct
gtggtccaccttcaaatcgataaccgggaatgcgctcagaagtccgaagactgtttctca
aacaccaacgaagcggcttccttcatcgcagcggcacacattaaagccgacctgccttat
cctctcgtgtccgtcaacagtaagtcgatttcccagccgggctggtcaacaagatccgac
tctcgatgctcctttttaggtgacctgacggttcaaaagatgcccacgttccccatgtac
gtgatcggcgtggcggtcgtcatcgttcttctcattgtggtgttgggcatgctggcggcc
aagaggaaaaataaacacgcgttgctgtggatgcccgatggctttttggccaataaaaac
gacaagaggaaagaacctgttggtcaagatgacttcgacatgaaaaatttcaagagcccg
gacggaaccatgatggatggacggcagggccagagatggatggacgatgaggttccagcc
aagatcccgaggaatgaagacaagcccttgctcatgtcttccgacggaggcgtcgaccgg
agggagtggaccctgcaacatcgcaaggccgctgatgtcatcctaactccgccacaagcc
gacggagagacaaactgtctggatgttaacgtcaagggacctgatggcttcacgccgctg
atgttggcttcgctccgcaacggcggcggccccgactgctcgttcccgggcgaggaggaa
gaggagagcggaggcgacgaaccgggtccgagcgtcatatccgacttgatcgcgcaaggt
gcttcgctcatggcccagacggaccgcacgggagaaacggcgctgcatctggccgctcgt
tacgccagggcggacgccgccaagaggttgctggacgccggcgctgatcccaacgcccac
gacaacatgggcagaactcctctgcacgccgccgtggcggcggacgcgcagggcgtcttc
cagattctcattcgcaatcgagccacggatctggactcccgaatgaatgacggcaccact
cctctagtcctggcggccaggttggccgtggaaggcatggtggaagaactgatccactgc
cacgctgacatcaacgctgttgatgatcatggtaagtcggctcttcactgggctgcagca
gtgaacaacgtggaggccacgcttgtgctcttgaagaacggagccaaccgcgacatgcag
gataataaggaggagacccctctgttcctggccgccagagaaggcagcttcgaagccgct
caattgctcctcgaccactactcaaatcgcgacatcaccgaccatctcgatcgtctcccc
agagacacggctcaagaacggatgcaccacgacatagtgcgcctgctggaccagtacaat
ttggttcacagcccccacaacgggcccaatcacatcggcggaaactcttcagtcatgtgc
ggggcgaacggagccgccttcatcggcatgcgtcccggcccgcagggaaaaaagagccgc
aggggcggcggcaagatggggggtgttggaggggggaccaaggagcccaaagacatgaag
gctaagcgaagaaagaagcccaccggaggggagggtccgggtgccggcggcggcggtggc
gtcaacggcgtgaaggcagctggaggacttcctgaaagttccgtcaccatgtcgcccgtc
gactccctggagtcgccgcactcgtacacgggcgacgcgtccggcgcggccaccaccact
gccaactcgccgcccctcatgagcagccccggaaccaggcccatgctgccccctgtcagc
cacatgctgggccagcaacagcagcagcagcaagcctgggtgggcatgagcaagcacggc
tacggcggccacatgttcggcctggtgccgcaccccatggggggaagccaccgcggaatg
ccgcagcaccacggccacgggggccccatgctgacccccatgaatgtcaccatgagtcgg
gagcagctgccccccatcgtcaccttccaaatgatgccgcccggcggaggccaaggcatg
atgaagcagcctcagcaagcccacgtgcaggtgacccaagcccagccgcagaaccctcaa
tcgggacccggccacctccgctgcagccaggccttggtgtaccagatgcccgagccgatg
agcatggggctcccccaccccatgcagcacgccgtcagccacggagggccgctgccttcc
tatccacccatgcagagcccggtggataagtaccccaccccgccctcccagcacagcttc
accacccccgtcagctccgacggcaccacccccaggcatcctcccagcgagcacccctat
ctcacgccctcgcccgaatccccggacccttggtcgtcgtcttcgccgcactccaactcg
gactggtctgacgtcaccaccagccccaccccgctggccaacggccaccacgccttgccc
tcagcccgccacacgcacattccagagcaggcgcagctgcagccgcaggcgcagccgccg
gcgcagcaacgggcatcccagcagccgtcggctttggggagccagcaagtgttcgcgtag
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integrated database retrieval system
