Syngnathus scovelli (Gulf pipefish): 125970415
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Entry
125970415 CDS
T08785
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125970415 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125970415 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125970415 (lrrk2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125970415 (lrrk2)
Protein kinases [BR:
sscv01001
]
Serine/threonine kinases: TKL group
LRRK family
125970415 (lrrk2)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
125970415 (lrrk2)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125970415 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
Roc
COR-A
COR-B
Ras
LRR_13
Beta-prop_RSE1_2nd
Ank_2
LRR_9
Beta-prop_EML_2
MMR_HSR1
Gtr1_RagA
ARM_LIN_2nd
Arf
AAA_16
Kdo
NACHT
Septin
Glyco_hydro127M
V-ATPase_H_N
TFCD_C
IIGP
Arm_2
Motif
Other DBs
NCBI-GeneID:
125970415
NCBI-ProteinID:
XP_049578643
LinkDB
All DBs
Position
6:18158445..18174564
Genome browser
AA seq
2563 aa
AA seq
DB search
MRHAPRCGDSQQPSVRPFLPAGQAAVAARPIGASPRSCHDLTARGSFVEMDNKEELEERL
RKLLVRLKSPQEDRQLCTLIQILQDLLFLSRTDHASQLFADKDIQEPLMSALLSHMESRG
VQQVGWSLLCQLLEIRPSMLEDLNTPHLQILRVLSQYHSDCRVTTVALRCLALLLRSDAI
ALLLLEEVEEDVFGLVVQAMKSFASNEEVQLQGCRALHALLHRVRDDHLVAFVENQDHVA
VLAALHGFPGNPELLLQAMKVLLPLSRPSSNVEMLMSGSARCYSALISAMDAFPQSEELQ
ETACCLFRRFTSESYYNILVLNGVARVAVRACQTFPHNATLQAAALSCLADLTSSMVESR
AAAEQGLEDGEAEENRGGASGHLDLDLGWMGLCCTALDLHAADSHVQEAACWAIHSLLVH
GATRSQPEEEQDDRTPVHRQLMAAMLLHSSSPRVFQAATSAIATLVTRNPKMRSTLLSSG
LHVNVAEMMKKHPASVRVSVNACRLLGLLFRGRTAGLDELNMAVGQILSVMKVHNFQPEV
QLEALRASLVFLCPDRSLREHGSSVADPDMSDVSLKVLKNQCVVEGAHTVYLEVLNRFIR
CPNIQLCGLKVLASLADCSGAVDLLCQQGAIDTVLHTLQMFPQDREIHYWGLTLLSYLVS
KKKLSRMIVPVLASVLVASLGEYKEDYDLLLKCFQVALRMLDACSGSAVELQREDFDRQI
FQHLRDSDIPEHGKNPLRRSACLALSKMCANSELHYRMLEKACEDGDTVMAECLIELGAD
VNRKTKTESLIYQVCEKGGPLELVELLLSQGAHEQQLRRALAVSVKRADGPMVIQLLGRL
GLDLNNNALCLGGFRLGRLDAAWLCPLLAQRGGAHSLRYSTSKGASLARYILSLQRSRTL
GAPLKSPGEPCLTSGYMSDESDDSSFLSMDEGLFLDDMESDGSDSLTGVSLKPHNSTEEL
RGSSFKRNHGRRRHASAESGPIDGEHNEHAHRRYGRHQKTFGSLESSLVLPKEKEKIRLL
DLSGNELDCLLCLMDHGPVQQQLAHLLRLDLSHNVLLEFPPALCQSLSSLTRLDLQGNQL
QSLPVELLALPSLATLNVSRNCVGPHLVLDAACPSLRQLNLSFNKLTTFPHQIGRAAENL
EELLMEGNNVTELSVPPSNLPELKLLDVSKNAVTNISSSFLTGCPKLEIFNASSNKIGFL
EQLPPKLITLKLAKNNFVAVSDAILRLPTLRSVDMRTNQIAVLPGPGSWVSSNLRELMFS
HNLISQLDLSGPVHKWTRLEKLHLSDNKLVEIPPQVGLLEGLTSLDVSRNSGLRYFPDEM
GRLGRLWDLPLDGLRLQLDLKLIGSKTKDIVRFLQQRLKKAVPYYRMKLIVVGNAGSGKS
SLIHKLMKIKRSQQSSLKRTAGPSVDVRDWTIRERDKKKMVLNVWDFSGGDEVCGSQAHF
LSSRALYLVVHDLSRGAQQLDALKPWLFNIKALAPLSPVILVGTHIDVSDDVAFQACFNK
IREELLKHQGFPTIQDYFTVSTCEDSDTLVRLRKAIAKEAADFKIQGQPVMGQLVPDSYV
ELERRLLQERNRVPKEFPVLMRQQLLDLIQESQLPLEEAELPHAIHFLSQAGVLLHFDDP
TLQLQELYFIDPQWLCNVLSQKLTLKDGWNHRQGVLQRSAVENFLLETKCFPASHAVHYL
KLLEKFLIALPFGQDQLLVPSSLAKDKPSIELPHCENSEVIVREYEMPYFPADFWSRQIV
RLLEVSAYLLYGREKACPPEKVCWNRGVYLSWSIEVYCLVEAAREDVSSVLRITVPCSRK
GRVLLGQVVDQVDSLLEEWFPGLLSTDVHGSGEALLKKWALYSFQDGHEWSKMLLEDLFA
HFDQDFLLVNPEDPRCTIPISQVAPDVVLSDQPAGTTLDSDELHVDLSKANLLGDGGFGT
VYRGIYKNEEVAVKLFNKHASELYIYRLLRQELVVLGRLRHPSLVGLLGAGSSPHVLVME
LAMRGSLDSLFQHKKGSLNRKLRHRIALHVADGLRYLHSAMIIYRDLKPHNVLLFNLKTD
ADVIAKITDYGIAQYCCSMGVRCSEGTPGFRAPEAARGNVTYNQQADVFSFGLLLYDLLT
GGERICDGVKFPSEFDEVAVQGKLPDPVKHYGCSPWPDFQALMKDCLKINPHDRPTSAQV
FARLNSGEMLCLMREMPLARHVHAECVTVSGATAWLGGGSSTQRTGTVTSVDLGGNQVTT
QEIDNSPVLCLVTVQIPGETSDWLVAGTQSGSLVVLSGENPSTWYRLNNVTDSVTSLYFH
VNPPRLQRKNYLLVGTADGLLTIYEDSALKEFGQPVKSLVLGTVNTPVVCLCSSSYSLDG
RCVWAGCGTRILSFGADYDVSRNMDTRNAVTLPNQPRNEASVWRMAVDKYVYLSKAGMAT
VEVWDKRSERMVDCIDCAQIIRHGSDGGSEAVEPADGSQAWARWAQVKSLLVGQSTATLW
VGTRGGHLLLLDLGNKHHTLRVIPPRCHSLRCITSAFIEMQNWKNVVLVLGRRLPEDKSE
WDAQSVLMVWNSTMPSEVKDLKKHLERRENIAARMREQLHSHD
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atgagacatgcgccccgatgcggcgactctcagcagccttccgtgcggcccttcttaccg
gccggccaggcagccgtggccgctcggcccatcggagcctctcctcgaagctgtcatgat
ctgactgcccggggctcgttcgtcgagatggacaacaaagaggagctggaggagaggttg
aggaagctcctggtcaggctcaagagcccccaggaggacaggcagctttgcacgctcatt
cagatcctgcaggatctgctcttcctgtctcgcaccgaccatgcctctcagctatttgca
gacaaagacattcaagagccacttatgtctgcactgttgtcacacatggaaagcagagga
gtccagcaggtgggctggtcactgttgtgtcaattgctggaaatacgtccaagtatgttg
gaggacctaaacacacctcacctgcaaatcctcagggttctatctcagtaccactctgac
tgccgagtaaccacagtcgcgctccgatgcctggcgctccttctccgctcagacgccatc
gctcttctgctgctggaggaggttgaggaggacgtgttcggcctggtggtgcaggccatg
aagtctttcgcctccaacgaggaggtgcagctccaaggctgccgagctctacatgccctc
cttcatcgagtgagggatgaccatttggtggcgtttgtggagaaccaagaccacgtggcg
gttctggccgccctgcacgggttcccggggaaccccgagctgctgctgcaggccatgaaa
gttctcctccccctgtccagacccagcagcaacgtggaaatgttaatgtccggcagcgct
cgctgctattctgcactcatctcggccatggatgccttccctcaaagcgaggagctccag
gagacagcgtgctgcctgttccgaaggttcacgtcagagagctactacaacatcctggtg
ctgaacggcgtggcccgggtggcggtaagggcctgtcagacgttcccccacaatgccacg
ttacaagccgccgccctctcctgcctggcagacctcacgtccagcatggtggagagccga
gcggcggccgagcagggcttggaggacggcgaggcggaggagaaccgtgggggtgcctca
ggacatctggatttggacctgggctggatggggctctgctgcacggcgctggatctccac
gccgccgactcgcacgttcaggaagctgcatgctgggccattcatagtctgttggtccac
ggagctacaaggagtcagccagaagaggagcaggatgatcggactcctgttcacagacag
ctgatggcggccatgttgcttcactcctcctcgccccgcgtcttccaggctgccacaagc
gccatcgccacactggtcacacgaaatcctaagatgcgttccaccctgctgtccagcggc
ctccatgtcaacgtggcggagatgatgaagaagcacccggcctcggtccgggtgtccgtc
aacgcctgccgcttgctcggcctcctcttccgaggccggactgccggcctggatgagctc
aacatggccgtgggtcaaatcttgagtgtcatgaaggtccacaactttcaaccggaagtt
caactggaggccctgcgagccagcctggtcttcctctgtccagaccgaagcttacgagag
cacggctcctcggtggcggaccccgacatgtccgacgtgtccctgaaagtcctgaagaac
cagtgtgtggttgaaggtgcacataccgtctacctggaagtcctcaacaggttcatcagg
tgtccgaacatccaattgtgcggcttgaaggtgctcgcctccctggccgactgctcaggt
gcagtggatctgctctgccagcagggggccatcgacacggttctccacacgctgcagatg
ttcccacaggatcgagaaattcactactggggtctaaccctgctcagctacttggtatcc
aagaagaagctctccaggatgatcgttcctgtactagcttcagtcctggtggcctcactg
ggcgagtacaaggaggattatgacttactgctcaagtgtttccaggtggctctgaggatg
ctggacgcttgttcgggatcggctgtggagctccaacgagaagattttgataggcagata
ttccagcacctccgagactccgacattcccgagcacggcaagaatccacttcgtcggtca
gcgtgcttggctctgtccaagatgtgcgccaactcggagcttcactacaggatgctggag
aaagcgtgtgaggacggagacaccgtcatggcagagtgtctcatcgagctcggggccgac
gtcaacaggaagaccaaaaccgagtccctcatctaccaggtgtgcgaaaagggaggccca
ctggagttggtggagctgctgttgagccaaggcgcccacgagcagcagctccgccgggcc
ttggccgtcagcgtgaaacgcgcagatggccccatggtcatccagctgctgggccgtctg
ggcctggacctcaacaacaacgctttgtgcctgggtggttttcgcctggggcgtctggat
gcagcttggctctgccccctgctggcccagagaggcggagcgcatagtttgcgttacagc
acaagtaaaggagctagcttggcacgctacattctgtccttgcaacgctccaggacactg
ggagctcctctgaagtctccgggggagccctgcctgacgtctggatacatgtcggacgag
agcgatgactccagcttcctctccatggacgaaggcctcttccttgacgacatggagagt
gacgggagcgattcactgacgggggtctccctgaagccccacaactccacggaggagttg
agggggagttcgttcaagaggaaccacggacgccgcagacacgctagtgcggagagtggt
ccgatagacggcgagcacaatgagcacgcacacagacgatatggaagacaccaaaaaacg
tttgggtctctggagagctcattggtgcttcccaaggagaaggagaagatccgcctgctg
gacctgtcggggaacgaattggactgcctgttgtgcctgatggaccatggcccggttcag
cagcagctggctcaccttctgagactggacctgagccacaatgttcttctggagttccca
cctgcgctctgtcagagtttgagcagcctgacccgattggacctacaaggcaaccagctt
cagtcgcttccggtggagctcctcgccttgccgtcgctcgccacgctcaacgtctcacgc
aactgcgtaggcccgcacctcgttttggatgccgcctgtccgtcgctgcggcagctcaac
ttgtccttcaacaagctgacgaccttcccgcaccagataggccgcgccgccgagaacctg
gaggaacttctcatggaagggaacaacgtgaccgagctctccgtgcccccgtcgaacctc
cccgagctcaaactgctggacgtgagcaagaacgccgtgaccaatatctcatccagcttc
ttgacaggctgcccaaagctagaaattttcaacgcctcctccaacaaaataggtttcttg
gaacagctcccgccaaagctcataacactgaaacttgccaagaacaatttcgtcgccgtt
tccgatgccatcctccgcctacctaccttgagatcggtggacatgaggaccaatcagatt
gcagtattaccgggcccgggctcgtgggtgtctagtaacctacgcgagttgatgttcagc
cacaacctcatcagccagctggatttaagcgggcccgtccacaagtggacccgactggag
aagctgcacttgagtgacaacaagctcgttgagatcccaccacaggttggtctcctggag
ggtctcacttcattggacgtgagtcgcaactccggcctacgttattttcccgacgagatg
ggcaggctgggtcgactgtgggacctcccgctggatggcttgcgactccagctggacctc
aaactgatcggaagcaaaaccaaggacatcgtcaggtttctccagcagcgtctgaagaag
gccgttccgtattaccggatgaagctcattgtggtggggaatgccggcagcgggaagagt
agcctgatccataagttgatgaagatcaagcgttcgcaacagtcctcccttaaacggacg
gccgggcccagcgtggacgtacgcgactggaccatcagggaacgggacaagaagaagatg
gtgctgaatgtctgggatttctcaggtggcgatgaggtgtgcggctcgcaggctcatttc
ctctcctccagagcgctctacctggtggtccacgacttgagcagaggagcccagcagctg
gatgcgctcaagccctggctcttcaacatcaaggcgctggctcctctctccccggtcatc
ctggtgggaacgcacatagacgtgagtgacgacgtggccttccaagcctgcttcaacaaa
atccgcgaggagctgctcaagcatcagggcttcccgaccatccaagactacttcaccgtg
tccacctgcgaagactcggacaccctcgtccgactgcgcaaggccatcgctaaggaggcc
gccgacttcaagatccagggtcagcccgtgatgggccagctggttcccgacagctacgtc
gagctggagcgcaggcttctccaggagaggaatagagttccgaaggagttccccgtccta
atgcgacaacagctgctggacctcatccaggagagtcagctgccactggaggaggcggag
cttccacacgccatccatttcctcagccaagctggggtcttactgcactttgacgatccc
acgctccagcttcaggagctctacttcatcgatcctcagtggctctgcaacgtcctctcg
cagaaactgaccctgaaggatggatggaaccatcgtcaaggagtgcttcagcgctcagca
gtggaaaactttctgctcgagaccaaatgtttccccgccagtcatgctgtgcactacttg
aaacttctggagaagttcctcatcgcgcttccctttggacaagatcagcttcttgtgccc
agcagtttagcaaaagacaagccgagcattgagctacctcactgcgagaactcggaggtg
atcgttcgagagtacgagatgccgtacttcccggccgacttctggtcgagacagatcgtc
cgcttgctggaggtctcggcttatttgctctacggcagagagaaagcgtgcccacctgaa
aaagtgtgctggaatcgaggcgtgtacctaagctggtccattgaggtctactgcctggtg
gaggcggcgcgggaagatgtttccagcgtgctccggatcaccgtgccctgctcgcggaaa
ggacgggtgctcctgggtcaggtggtggaccaggtggactcccttctggaggagtggttc
ccgggcctgctgagcaccgacgtgcacggcagcggggaggctctcctgaagaagtgggct
ctctacagcttccaggacggtcacgagtggagcaagatgctgctagaagacctctttgca
catttcgaccaagactttcttctggtgaaccctgaagaccctcgctgcaccattcccatc
tctcaggttgctccagacgtggtcctgagcgatcagccggctgggactaccttggacagc
gacgagctgcacgtggacctctccaaagccaacctccttggggacggcggctttggcacg
gtctaccgaggcatctacaagaatgaagaagtggctgtcaagttattcaacaagcacgcc
tcagaactttacatctacagactccttagacaggagctggtggtgttgggccgcttgcgc
caccccagcctggtgggcttgctgggggccggctcgtctccgcacgtcctggtgatggag
ctggccatgcggggttccctcgactccctgttccagcacaagaaaggaagcctgaacagg
aagctcaggcacaggatcgctctgcacgtggccgatggactacggtacctccactcggcc
atgatcatctaccgcgacctgaagcctcacaacgtgctcctgttcaacctcaaaacggac
gccgacgtcatcgccaagatcaccgactacggcatcgctcagtactgctgcagcatgggc
gtccgctgctcggagggcacgccaggtttccgcgcacccgaagccgccagggggaacgtg
acgtacaaccagcaggctgacgtcttttcgttcgggctcctcctctacgacctgctgacg
ggcggcgagcgcatctgcgacggggtcaagttccccagcgagtttgacgaggtggccgtg
cagggaaagctaccggatccggtgaagcactacggctgctccccttggcctgacttccag
gctctgatgaaggattgcctgaagattaatcctcatgatcgacctacatctgctcaggtg
ttcgcccggctcaactcgggcgaaatgttgtgtctgatgagagagatgccgctagccagg
catgtgcatgccgagtgcgtaacggtgagcggcgccaccgcctggctgggaggggggagc
agcactcagaggacaggaaccgtcacctcagtagacctcggcggcaaccaggtcaccaca
caggagatcgacaacagtcccgttttatgcctggtgacggtccagatccccggcgagact
tccgattggctggtggccggcacgcagtcgggttcgctggtcgttctcagcggcgagaac
ccgtccacgtggtaccgcttgaataacgtcactgattccgtcacctcgctctactttcac
gtcaatcctccacgcctgcaaagaaaaaactacttgctggtcggcacggctgacggcctc
ctcaccatttacgaagattcggctctcaaggagtttggtcagccggtgaagtctctggtc
ctgggcaccgtcaacactcccgtggtgtgcttatgctcgtcgtcgtactctctggacggt
cgctgcgtttgggccggctgcggtaccaggatcctgtcattcggcgccgactacgacgtg
agcaggaacatggacacccgcaacgccgtaacgctcccgaatcaacccagaaacgaggcc
agcgtgtggcggatggcggtggataaatacgtgtacctcagcaaagccggcatggccacc
gtggaggtttgggacaagaggagcgaacgtatggtggactgcattgactgcgcgcaaatt
ataagacacggttccgacggagggagcgaggcggttgagcccgccgacggctcccaagct
tgggcccggtgggcgcaggtcaagtccctgctggtcgggcagagcactgccacgctttgg
gtgggcacccgagggggccacctgctacttctggacttgggtaacaagcaccacacgtta
cgggtcatcccaccaagatgccactcgctacgatgcatcacctcagcattcatagagatg
caaaactggaagaatgtggtcctggtgttgggcagaagactcccggaggacaagagcgag
tgggacgcccagtcggtgctgatggtgtggaacagcacgatgccctccgaagttaaagat
ttgaagaaacaccttgagaggagagaaaacattgcggccaggatgagagaacagctgcac
agccatgactga
DBGET
integrated database retrieval system
