Syngnathus scovelli (Gulf pipefish): 125970446
Help
Entry
125970446 CDS
T08785
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125970446 (zgc:173742)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125970446 (zgc:173742)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Topoisomerases
125970446 (zgc:173742)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
125970446
NCBI-ProteinID:
XP_049578715
LinkDB
All DBs
Position
6:10008038..10025395
Genome browser
AA seq
746 aa
AA seq
DB search
MGREKDVKEDRKTKHKVTKLNMRPNGNEVAEAGGDSAKSTKSTEKTPNGKIKKIKAPKTE
KLESPSNFSSEPDDGNFTTKKKGVKRRRTKDEPADVPTSEALKNSSSTKRNGGKHKKRHH
SEEESDGEPLKKHAKKKPKTDVKIEEGEQPVSKKSKKTKEEIKEARELKIRQKEEEEQKR
WRWWEEEKYEAGVKWRFLEHKGPYFPPDYQPLPDNVHFYYKGEPVKLSLAAEEVAVFFAQ
MLDHEYTTKKVFRENFFKSWRREMTHEEQLLIQDLDKCDFGEIHAMHKAKVEEKRNLSKE
EKLVLKEANQKIVEEFGYCTLDHHRERIGNFKIEPPGLFRGRGEHPKQGKLKKRIQPEDV
IINCSRESCIPVPPAGHHWKEVRHDNTVTWLASWTENIQGSIKYVMLNANSKLKGEKDWE
KYEVARKLKQHVDGIREQYLIDMKSKEMRIRQRAVALYFIDKLALRAGNEKEEGETADTV
GCCSLRVEHITLHKQLDGNECVVEFDFLGKDSIRYYNKVPVISKAFKNLKIFMENKDPGD
ELFDRLTTTMLNKHLSSLMPGLTAKVFRTYNASTTLQQQLKELTNDSMVNDAEKLLGYNR
ANRAVAILCNHQRAPPKTFEQSMANLQAKITSRKEQLALAKTELEQAKKDAKVKGSSDPK
LQILVEKKKAAVKRCSESLLKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKRMGVP
IEKIYNKTQRDKFAWAIDMTETNFEF
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagagaaggacgtgaaagaagacaggaagaccaaacacaaagttacgaaactg
aacatgaggccaaacggcaatgaggttgctgaagctgggggcgacagtgcaaagtcaacc
aaatctacagagaaaactcctaatggaaaaatcaagaagataaaagcgccaaaaactgag
aagctggaatcaccaagcaatttcagtagtgagccagatgatggtaatttcactacaaag
aagaaaggagtgaaaagaagaagaaccaaagatgaacctgcagatgttcccaccagtgaa
gcactaaagaattcctcctcaactaaaagaaacggcggcaaacataaaaaacggcatcat
tcagaggaagaaagcgatggagaacctctgaaaaagcatgctaagaaaaaacctaaaacg
gatgtgaagatagaggaaggagagcagccggtttccaaaaagtctaagaagacaaaggag
gagattaaagaagcaagagaattgaagattcgacagaaggaagaggaggaacagaagcgc
tggcgatggtgggaagaagagaagtatgaagctggggtaaaatggaggtttctggaacac
aaagggccctattttccacctgactaccagcccctaccagacaacgttcacttctactac
aaaggtgagccagtgaagctgagcctggcagctgaggaggtggctgtgttttttgctcag
atgttagatcatgaatacactacaaaaaaggtttttcgggagaacttcttcaaatcttgg
agacgggaaatgacgcatgaggagcagttgttgattcaagaccttgacaaatgtgatttt
ggagagattcatgcaatgcataaagccaaggtagaggaaaagcgaaacttaagcaaggag
gaaaaactggttttgaaagaggccaatcagaagatagtggaagagtttggctactgtacg
ctcgaccaccacagagagcgtattggtaactttaagattgaacctccagggctgttcaga
ggtagaggcgagcatcccaaacaaggcaagctgaagaaaaggatccagcctgaagatgtc
ataatcaactgcagcagagaatcctgcatccccgtacctcctgccggccatcattggaag
gaagtccgccatgacaacactgtgacatggttggccagttggacagaaaacatccagggg
agcattaaatatgtcatgctgaatgccaactccaaactcaaaggtgaaaaggactgggag
aaatatgaggttgctcgcaaacttaagcagcatgtggatggcatccgtgaacagtacctt
attgatatgaagtccaaagagatgcgtattcgacagagagctgtggccctctacttcatt
gacaagctggcgctgagagctggtaatgaaaaggaggagggagagacggcagacacagtg
ggctgctgttcactacgtgttgagcacatcacactccataagcagctggatggcaacgaa
tgtgtagtggaatttgatttcctgggtaaagattccattcgctattacaacaaggtccca
gtcatcagtaaggcatttaagaatcttaagattttcatggaaaacaaggaccctggcgat
gagctctttgaccgcctcactaccacaatgttaaataagcatctgagttccctcatgcca
ggtctgactgcaaaggttttcaggacatacaatgcctcgaccactctgcagcagcaactg
aaagaactcacaaatgactcaatggtcaatgatgcagagaaacttctcggctacaacaga
gcgaacagggcggttgcaatcctctgtaaccatcagcgggcgccgccaaagacctttgaa
cagtctatggccaacctgcaggccaagattacttcaagaaaagagcaactggcacttgcc
aagacggagctggagcaagctaagaaggatgcaaaggttaaaggcagctcagaccccaag
ctgcagatactggtggagaagaagaaagcagctgtgaagcgctgttcggagagtcttctg
aagctggaagtccaggccaccgatcgagaggagaacaagcagattgcactgggtacctcc
aagcttaactatctggatccacgcatcagtgtggcctggtgcaaaagaatgggggtgcca
attgaaaaaatctacaataagacccagagggacaagtttgcctgggcaattgacatgaca
gagacaaactttgagttctga
DBGET
integrated database retrieval system
