Syngnathus scovelli (Gulf pipefish): 125970492 Help Entry 125970492         CDS       T08785                                  Symbol lamb1a Name (RefSeq) laminin subunit beta-1a   KO K05636   laminin, beta 1 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04510   Focal adhesion sscv04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125970492 (lamb1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125970492 (lamb1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C BNR_6 Motif Other DBs NCBI-GeneID:  125970492 NCBI-ProteinID:  XP_049578776 LinkDB All DBs Position 6:complement(15272468..15288402) Genome browser AA seq 1819 aa AA seqDB search MWTGAVWGSSELWKFGFVVCEKTMMLRVQLVLLLGLLVFDLAQQLKPVLGQDENEINLPE LSDVCTKGSCYPGTGDLLIGRAHQLSSTSTCGLNRPEPFCIVSHLQEEKKCFMCDSAAPY SEPVNQTEGHRIENVVTTFAPNRLKTWWQSENGMENVTIQLNLEAEFHFTHLIMTFKTFR PAAMVIERSSDFGKTWKVYRYFSYDCETSFPDVSVGPMKKVDDVICDSRYSDIEPSSEGE VIFRVLDPAFRIHDPYSPRIQHMLKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAVYD MVVRGNCFCYGHASECAPVQETGYVREGMVHGHCMCNHNTKGLNCERCQDFYHDLPWRPA EGRNTNACKKCNCNQHADVCHFDIAVYMASGNVSGGVCDDCQHNTTGYNCEQCKPFYFQH PEKDVRDPNICQPCSCDPLGSLNGGICDGKTDIRLGLISGQCRCKGNVEGERCDRCKQAY YGLTDSAEGCKACTCNILGTVPGGNPCDSETGNCFCKRLVTGKDCDHCVPEHWGLSNDMD GCRSCDCDLGGAINNQCDELTGQCVCREHMFGRSCDQVESGFYFIALDHYTYEAEDAKLG RGVMVVPRPHPQDHVPTWTGIGMVNVPEGAFLEFSVDNIPHSMEYDILIRYEPQLPDQWE EVLMTVMRPGPIRADSRCINTVPDDDNQMISLHPGSRHVALPRPVCFESSLNYTIRLSLS LYSALSDVQSPYTLIDSIVLMPHCKNLDLFTTSEGGESGANRGWETFQRYRCMENSQSVV KTPMTDICQNLIFSISALLHQGAKECQCDPQGSLSTVCNVSGGQCQCRPHVVGRNCDKCA PATFQFGPSGCKECNCDAQGSQSPLCDQLSGQCLCVPGAYGRQCNRCLPGYWGFPTCRPC SCNGHTEDCDAHTGQCLNCRDYSTGHNCDRCLDGYYGDLTLGSGDHCRPCMCPDGPGSLR QFAGSCFRGDNSQQAVCVCDTGYKGTRCNECSPGYYGNPHEIGGSCQPCHCNNNIDMLDP ESCNSQTGECLRCLYHSEGHSCENCMMGYYGNALLQDCRKCVCNHLGSDSASCPSSGDCH CDRNSGQCHCLPNVIGQHCDRCAPDTWNMASNTGCQACECDIKHSYGNSCNEISGQCSCM PGFGGRTCRECKALFWGDPEVECHECDCEPHGITQPQCNKDNGHCVCVEGVSGPRCDTCA RGFSGTFPNCQRCHQCFAEWDAIVGQLTNQTHRLANKVNTIKISGVGGPYRKSIESMERS ISDIHAIFNQNPASQPLTEIQQLLQEASDLMGSLSQSLNQTENILLDVQEENSNMEGQLK LLMADAQKLEQTVQDILDQVEFIRNSDVRGAADSVSKYLLQSLKAEERANASTVGPNSPV ENSANIRKLTEDKMNLTRDEFLRRHNDHAQRLDDLAGQIQTLDLSQLSHKTCGNSDGSCS SPCGGLGCVNAEGGLMCGGPECDGVLTKVHSSWQNAFDSEKEIVNAMKEVDKLAKMVSEA KQKADQAKVSARDVFMKTNKTKHDIDRSSEELRVLIREIRDFLTEDGADLESIEKVANEV LAMQMPTTREQLQNLTDEIREKVGELGNVEIILEQSTNDIARAESLLEQARKASQEADDV KESAEMVKQALAEAQRAQTAASSAIQHATDDIKNTNKLLLLVKSGTTDVEVKLDNATKRL QQLDEDVTLLRNKTLKVTLTSEQTIHDATIIRQIVKEVKKGIDTEIKDKYSTVEQLIDQK GSGVAEAKKRAELLQQEAKELLLQASRKLKILKDLEKLFEDNQQTLEVKAEQLGELEASV KELLQQISHKVTLYSTCSF NT seq 5460 nt NT seq  +upstreamnt  +downstreamnt atgtggacgggggcggtgtgggggagttcagaactttggaagtttggttttgtcgtctgt gagaagacgatgatgctgcgtgttcaactagtgctgcttcttggtctactggtgttcgac ttggcccagcaactcaagcctgtgttaggccaagacgagaatgaaatcaacttaccagaa ctcagtgatgtttgcaccaagggcagctgttatccaggaacaggagatcttcttatcggt cgagcgcaccagctttcatcaacctccacctgtggactaaaccgtcccgaaccgttctgc attgtcagccatctgcaggaggaaaaaaaatgtttcatgtgtgactcagcggccccctac agtgaaccagtgaatcagacagaaggccatcgtattgagaatgtcgttaccacatttgct ccgaacagactgaagacctggtggcaatctgagaatggtatggaaaatgtcaccatccaa ctgaacctggaggcagagtttcacttcactcatctcatcatgaccttcaaaacatttcga cctgctgcaatggtcattgagcgctcgtcagactttggcaaaacctggaaagtgtatcgg tacttttcctatgactgtgaaacgtccttccctgacgtttctgtcggtcccatgaagaag gttgatgatgtcatctgtgactcacgctattccgacattgaaccatcttctgagggagag gtcattttcagagttttggaccctgcttttcggatccatgacccatatagccctcgaatc cagcatatgcttaagatcaccaatctaagggtgaagttcaccaaactccacacgcttggg gacaacttgcttgactcgcgtatggagattaaagagaaatattactatgcggtctatgat atggtggttcgaggaaactgcttctgctatggacatgcgtcagagtgtgccccagtccag gaaactggttatgttagggaaggcatggttcatggtcactgcatgtgtaatcataatacc aaaggactgaactgtgaacggtgtcaagatttctatcatgacctaccttggagacccgct gagggacgcaacaccaacgcctgcaaaaagtgtaactgcaaccagcacgcggacgtatgt cactttgacattgccgtctacatggcttcaggaaatgtaagtggcggtgtgtgtgatgac tgtcaacacaatacaactggatacaactgtgagcagtgcaaaccgttctacttccaacac cctgagaaagatgttagagatccgaacatctgccagccatgcagttgtgacccattgggc tctttgaatgggggaatctgtgatgggaagacagacattagactcgggctcatttctggt caatgccgctgcaaaggcaatgtggagggagaacgctgtgatcgctgtaaacaggcgtac tatgggctcactgattcggcagaaggttgcaaagcctgcacttgcaacattctgggaaca gtgcctggtggaaatccttgtgacagtgagacaggaaactgcttctgtaaacgattggtg actggaaaggactgtgaccactgtgtgccggaacactggggtctcagcaatgatatggat ggctgcagatcgtgtgactgtgacctagggggagccatcaacaaccagtgcgatgagctg actggtcagtgcgtctgcagagaacacatgttcggccgaagctgtgatcaagttgagtca ggattctacttcattgcgctcgaccactacacctatgaggcagaggatgccaagttagga cgcggtgtaatggtggttccaaggccccacccacaggaccacgttcccacctggacaggt attggcatggttaatgtccctgagggagccttccttgaattttctgttgacaacattcct cactccatggagtatgacatcctcatccgctatgagcctcagctgcctgaccaatgggaa gaagttcttatgacagtgatgagaccaggacccatcagagcagatagtcgttgtataaat actgtgccagatgatgacaaccaaatgatttcactccaccctgggtcacgacatgtggct cttcccagaccagtttgttttgaatccagtttgaactataccatccgcctaagtctgtca ttgtattcggccctcagtgatgttcagtcgccgtacacgctcattgattcgatcgtgctg atgcctcactgtaagaacttggacctttttaccacctcagaaggaggggaatctggtgca aatcgtggatgggaaacttttcagcgttatcgttgtatggagaatagccagagcgttgtc aagacaccgatgactgacatttgtcaaaacttaatcttcagcatttctgctctgcttcat cagggagccaaagaatgccagtgtgacccccaaggctctctgagtacagtctgcaatgtg agtggaggtcaatgtcagtgccgacctcatgtcgttggtagaaactgtgacaaatgtgct ccagctactttccagtttggaccaagtggctgcaaagaatgcaactgtgacgctcagggc tcacagagccctctttgtgatcagctgtctggtcagtgtttgtgcgttccgggagcatat ggacgtcagtgtaatcgctgccttccgggctactggggctttcctacgtgccgtccatgt tcttgtaatggacacacagaggactgcgatgctcacacgggacagtgcctcaactgcagg gactacagcacagggcacaactgtgacaggtgcttggatggttactatggtgacctgacg ctgggctccggtgaccattgtcgcccctgtatgtgtcctgatggtccaggtagcctgcgg cagtttgctggaagttgttttcgaggtgataattcccaacaagctgtctgtgtctgcgac actggatacaaaggtactcgctgcaatgagtgctcccctggttactatggaaatcctcat gaaatcggggggtcgtgccagccctgtcactgcaacaacaacattgatatgttggaccca gaatcctgcaactcccaaactggcgaatgcctgcgctgtctatatcacagcgaagggcat tcttgcgaaaattgcatgatgggttactatggcaatgcacttctgcaagactgcaggaag tgtgtttgtaaccatctgggtagcgatagtgctagctgtccttcatcaggtgactgtcac tgtgaccgcaatagtggtcagtgtcattgtcttcccaatgtgattggtcagcactgcgat cgttgtgcacctgacacctggaacatggcgagcaatacgggctgccaggcctgcgagtgt gacattaaacattcgtacgggaactcgtgcaatgagatcagtggtcaatgctcatgtatg ccaggctttggaggcaggacgtgcagagaatgtaaagcactcttctggggtgacccagag gtcgaatgtcatgaatgtgattgtgaacctcatggcatcactcaaccacaatgcaacaaa gacaacggtcactgcgtttgtgtagaaggcgtgtctggtccacggtgtgatacctgcgcc cgtggcttctccggtactttccccaactgccaacgctgccaccaatgctttgcggagtgg gacgctatcgtcggacaattaacaaatcaaacgcaccgacttgcaaacaaggtgaacact atcaagattagtggagtcggtggaccctacagaaagtcaattgaaagtatggaaaggagt atatcagacatccacgccatctttaaccaaaacccagcttcacagcctctaaccgagatc caacagctcttacaagaggccagtgacttgatgggatctttgagccagtcactgaaccag acggaaaatattctactcgatgtgcaagaagagaatagcaacatggagggtcagctaaaa ttgctgatggcggatgctcagaaactcgagcagacagttcaagacattctggatcaggtt gagttcatcaggaattcggatgtcagaggcgcagctgacagtgtatcaaagtacctcctg cagtctttgaaagctgaagaacgagcaaatgcatccaccgtcggccccaacagccctgtg gaaaactctgctaacatacgtaaactcacggaggataagatgaacttaaccagagatgag tttctcaggagacacaatgaccatgcacagagactggatgacctggcaggtcaaatccag actctggacctttcacagctcagccacaagacatgcgggaattcagatggttcatgttcc tctccctgtgggggattaggatgtgtaaatgcagagggtggcctcatgtgtggggggcca gaatgtgatggtgtgttgacaaaagttcattccagttggcagaatgcttttgactctgaa aaggaaatagtaaatgccatgaaggaagtggataaacttgccaagatggtgtcagaggca aaacaaaaggcagatcaagcaaaagtgagcgcccgtgatgttttcatgaagactaacaag accaaacacgatatcgatcggagcagcgaagagttgcgagtccttatcagagagattcga gacttccttacagaggatggagcagacttggagagtattgaaaaagttgctaatgaggtg ctggccatgcaaatgccaaccacacgagaacagcttcagaacctcacagatgaaattcgt gaaaaggtgggggaactgggcaatgtggaaattatcctggagcagagcacgaatgacatt gcaagagctgaaagcctacttgagcaggcccggaaagctagtcaggaggcagatgatgtg aaggaatctgctgagatggtcaaacaagctctggcagaagctcagagagctcagacagct gccagcagtgcgatccagcatgccactgatgatatcaagaacaccaacaagcttctgctc ttagtcaaatcaggtacaaccgatgtcgaagtaaaattggacaacgccacgaagcgattg cagcagcttgatgaggatgtgacattgttgagaaacaaaactctgaaggtcacactgact agtgaacagaccattcatgatgcaacaatcataagacaaatagtcaaagaggtgaaaaag ggcatcgacactgaaattaaggacaagtactccactgtggagcaactaattgaccaaaaa gggagcggggtggctgaagcaaagaagagggcggagttattgcagcaagaagctaaggag ctgctgttgcaagccagtcgtaagctgaagattctcaaagatctagaaaagttatttgag gacaaccaacaaacacttgaggtgaaggcagagcagctgggtgaactggaggcctcagtt aaggagctgctgcagcagatcagccacaaagttacactttatagcacatgttcattctaa

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