Syngnathus scovelli (Gulf pipefish): 125970546
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Entry
125970546 CDS
T08785
Symbol
pard6a
Name
(RefSeq) partitioning defective 6 homolog alpha isoform X1
KO
K06093
partitioning defective protein 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125970546 (pard6a)
09144 Cellular community - eukaryotes
04530 Tight junction
125970546 (pard6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125970546 (pard6a)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
125970546 (pard6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
125970546
NCBI-ProteinID:
XP_049578878
LinkDB
All DBs
Position
6:complement(15227012..15235079)
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AA seq
406 aa
AA seq
DB search
MILAAVPQFVFQTERRMSRHQQTSFKASDSVVEVKSKFDAEYRRFAFKRNCPGGFQEFYS
LLQTIHRIPEVDMLLGYADDHGDLLPINNDDNFHKAVSSANPLLRIIITKKEDEPAIFAT
NSLQRRKKGLGLTGLRTAGSLSTHSKSKMGVMSIGRPQNFRQISSIIDVDILPETHRRVR
LHKHGTHKPLGFYIRDGASMRVTPYGVEKVPGVFISRLVRGGLAESTGLLGVNDEILEVN
GIDVTGKSLDQVTDMMVANSRNLIVTVKPANQRNNVMHRGSKTTGNSGSFGSIGSTGSAL
SHDSTSPATHSTPITASNSIVEGDSDEEEDDDGDLILESDSLTFYQSHNITNLTSERLHS
SPMVRTLQQSVSMPEYMGSNLRAGQNGHPSHSIQRSMREGGNIITM
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattttagccgcagtgccgcagtttgtcttccaaaccgagagaagaatgtcacgacat
cagcagacgtcgttcaaagcctcggacagcgtggtcgaggtcaaaagtaaatttgacgca
gaataccgccgctttgctttcaagaggaactgcccaggtggcttccaagagttctatagc
ctcctccaaactatccatcgcatccctgaagtagacatgttattgggatatgcagatgac
catggagaccttcttccaatcaacaatgatgataacttccacaaagctgtctcatcagca
aatcccttacttcgtattatcataaccaagaaagaggatgaacctgcaattttcgccact
aactccctccagaggcggaaaaaaggcctgggtttgacaggtctccgtaccgctggttca
ttgtctacccactcaaagagcaaaatgggtgtcatgtctattggtcgaccacagaacttc
cgtcaaatttcatcaattattgacgtggatatcctacccgagacacatcgccgagtacgg
ctccacaagcacgggacgcataaacctctgggcttctacattcgagacggggccagtatg
agagtgacgccttatggtgtagaaaaggttccaggagtgttcatatcccgccttgtgcgt
ggtggtcttgcagagagtactgggctcttgggagttaacgatgaaattcttgaggtcaat
ggtattgatgttacaggaaaatctttagaccaggtgacagacatgatggtggccaacagc
cgcaatcttatagtgacagtgaaaccagctaaccagaggaacaatgtcatgcatcgaggg
agtaaaacaaccggaaattctggttcttttggctcaattggatcgacaggctccgctctg
tcacatgattcaacgagtcctgccactcacagcacccccatcactgcaagtaacagtatc
gtagagggtgacagcgatgaagaagaagatgatgatggtgacctcatcctggaaagtgac
tctttgacattctatcaatcacacaacattacaaacctcaccagtgaaagattgcacagc
agccctatggttagaacccttcaacagagcgtctccatgcctgaatacatgggatcaaac
ctgagggccggtcaaaacggacacccaagtcacagcattcaacgaagcatgagagagggt
ggtaatataataacaatgtga
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