Syngnathus scovelli (Gulf pipefish): 125970563
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Entry
125970563 CDS
T08785
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125970563 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
125970563
NCBI-ProteinID:
XP_049579008
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Position
6:complement(2485600..2656461)
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AA seq
679 aa
AA seq
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MAVWTRADKNGQLDLLLRERWIRVSAELTIETLTLTAETEVSGQGTNHWDHNGPPDDMRN
GISNGNEPGTRSGHLDPSPSSGHKQFRKGYSSSPGRVDVIRGPCDGTYGLNSPGKYSNNG
TDSDFGSPDSSYGSPGSSSGSKQGEVPVCRDVCTEAVRKVRVVKQESGGLGISIKGGREN
RMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQVLKKAGKQVTLEVKY
IREVSPLFKKLSLVAALTWNELWPQSQSYNGSEEAGSPEHSSSKDRKVMSLKMCFISRNL
TMPDLENRALSACGITGTATDDESDVNHIEEEALHLLLLRLLELHSPDGLHTVVLRCKDA
PTANSWFTAIHTNIAALLPQTLALINAYLGASNSIATQPHLRHIGWLAEQVQLEGGRQQY
RPVVMALTEKDILLFESVPWCRESWAMPLLTHPLLATRLVHSGSVRGSPAQNSDLVFATR
TGTGQGIESHIFRVETHWDLSSWTRALVQGAHSAAELIKEVSIGCTFNRQDVRLTLHYEK
GFTVMSEPAEPASGALLFRYPYEKLKMSGDDGIHNLYLDFGGPEGEMIQLKSDVMMAPRM
AATVSRPLLLCLILCVFCVLCCPSRITFTREELLNIGQSSPGIFSPVLSDPDCLAEILAG
AAVLYKLARRRRRGKRAGS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtggaccagagctgataaaaacggtcaactggacctacttctccgcgagcgc
tggatccgtgtgtccgccgaactcaccatagaaacgctgactttaacggccgagacggag
gtaagcggacaggggaccaaccactgggatcacaacggtcctccggatgacatgagaaat
ggcatatcgaatggaaacgaaccgggaaccaggtcagggcaccttgatccgagtccgtct
tcgggccacaaacaatttcggaaaggttacagcagcagccctggtcgcgtggatgttatt
cggggtccatgtgacggcacatacggattaaacagccctgggaagtactcgaataacggc
acagactccgactttggaagtcccgattctagctatgggagtcccgggtcaagttccggc
tcgaagcaaggcgaagttccagtttgtagggacgtatgcacggaggctgtgcgaaaagtc
cgagtcgtgaaacaggagtctggcgggctggggatcagtatcaaaggagggcgcgagaat
cggatgccgatccttatctccaagattttcccggggctcgctgcagaccaaagtcgcgcg
cttcgggtgggcgacgctatcctgtccgtgaacggcaacgacctccgggaggcaacgcat
gatctggcggtgcaggtcctgaagaaggcaggaaaacaagtgacgctggaggtaaagtac
attcgtgaggtttcaccactattcaagaagctttccttggtggctgccttgacatggaat
gagctttggccacagtctcagagctacaatggcagtgaggaagctggatctcctgaacac
agctcctccaaagacaggaaggtcatgagtttgaagatgtgcttcatcagtcggaaccta
accatgccagacttggagaacagggcgctctcggcctgtggaataactggaactgctact
gacgatgagtctgacgtaaaccacatagaagaggaagcgctgcatcttctgcttctgaga
ctgttggagctccattccccagatggactgcacacagtggtacttcgttgtaaagatgcc
cccactgctaactcctggttcactgccatccacaccaacattgctgccctgctcccacag
acgctggctctcataaatgcttacctgggagcctctaactccatcgccacacagcctcac
ctgagacacatagggtggttggctgaacaggttcagcttgaaggtggacgacagcagtat
agaccggtcgtcatggcactgacagaaaaggacattctgctttttgagtctgtgccatgg
tgtagagaatcctgggcgatgcctctgctcacacacccactgttggcaacaagactggtg
cattctgggagtgtccgtggctctcctgcacagaattctgacctggtgtttgctactcgg
accggcacaggacaaggaatcgaatcacacatttttcgtgtggagacccattgggatctg
tcttcatggacaagagccctagtacaaggtgcacattccgctgcagaactcatcaaagaa
gtctctattggctgcacattcaacagacaagatgtccggctgacactgcactatgaaaaa
ggcttcactgttatgagcgagccagccgaaccagccagtggtgctttgttgttcagatac
ccttatgaaaaactcaaaatgtctggtgacgatggaatacacaatctttatcttgatttt
gggggtcctgagggagaaatgattcaactgaaatctgacgtcatgatggcgccgcggatg
gctgccacggtgagtcgccctctgctactttgtcttattttgtgtgttttctgtgtcctc
tgctgtccatcccggatcacttttaccagagaagaactcttaaacatcggacagtcttct
cctggtattttctctccagttctctctgatccagactgtttggcggagattttagccgga
gcggcggtgctatacaagctagcacgccgaagacgacgtggcaaacgcgccggaagctga
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