Syngnathus scovelli (Gulf pipefish): 125970641
Help
Entry
125970641 CDS
T08785
Symbol
si:dkeyp-19e1.3
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125970641 (si:dkeyp-19e1.3)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125970641 (si:dkeyp-19e1.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
125970641
NCBI-ProteinID:
XP_049579135
LinkDB
All DBs
Position
6:11799456..11816583
Genome browser
AA seq
761 aa
AA seq
DB search
MKKDIDTLIAEERADIISKYDKGRQEGVSIDPWEDADYSIYKVTDRFGFLHEKELPTPSV
LEEKQKQQELDRVEKWLKMVKNWSKYKNSDKLVKRVYKGIPLQLRGQAWALLLDIEKVKK
DNEGKYEKMKQQARYFSTEIKQIDLDVNRTFRNHIMFMDRFGVKQQALFHVLAAYSVYNT
EVSYCQGMSQIAAILLMYLNEEDAFWALSQLLTNSKHAMHGFFIPGFPKLQRFQAHHERI
LSKMLPKLRKHLDMEQMSCGVYTTKWFLQCFIDRSPFTLTLRLWDIYILEGEKMLTAMAY
TTLKLHKKRLLKFQLEDLREFLQEQLAASFLLPDDIVVEQLQAAMSELRSKKLDLPPPAK
SEELPKKPLGQERPIHLLPLQPSCPLEVKSDLQPISQSNKESITPEHTNPQASKSHNRSS
TPSLLAADSAALLPKVTPKCMPTRAPPLPPKPANPCAKVNDAKDVKGRKLCEAPDTQEEP
MEWPPPYEATSLDDPSMHIEMLDLPELPPPPLIYSTEEEQTISPPAQNLSPPPSVATLKH
SPEAPTKSLVSSPCGFTSSSSPRHPPPKPTKFPVSLYVPASSADRRPSNTSQYDNLSEAD
DDDRCPERLLGSTPEEVPVHRDYDPALYPLPPPPIFIPSSPSPLLSLHCTLPSLPQESEY
EGDDRWVEGSIIIPSPPPNFADRLSPQPCHTTTSPPTYSKPFTRGPRDHSAFPAPLLYTR
SPPGHPRFSGQSALGVPEVRSSPDFCRMPPAGQQPPKSVTF
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacatagacacactgatagcagaagaacgtgctgacatcatttccaaatat
gacaagggcaggcaagagggtgtcagtattgacccttgggaggatgctgactacagcatc
tataaggtgacggaccgcttcggcttcctgcatgagaaagagctaccgacgcccagtgtg
cttgaagaaaagcaaaagcaacaagagcttgaccgtgtggagaagtggctaaagatggtg
aagaactggagcaagtataagaacagtgacaaattggtgaagcgtgtttataaaggcatc
cccctccagctaagaggccaggcctgggctttacttttggacatagagaaggttaaaaaa
gacaatgagggaaaatatgagaaaatgaagcagcaggctcgctacttctccacagagatc
aaacagattgacttggatgttaacagaaccttccggaaccacatcatgttcatggaccgc
tttggagtcaagcaacaggcactctttcatgtactagcagcctactctgtctacaacacg
gaggtgagctactgtcaggggatgagtcagatcgctgctatcctgctcatgtacctgaat
gaggaggacgccttctgggctctgtcccagctcctcaccaacagcaaacatgccatgcat
ggtttcttcatcccgggatttcccaaactgcagcgtttccaagcccaccatgagcggata
ctctccaaaatgctgcctaaactgaggaagcacctggacatggaacagatgtcatgtggg
gtttacaccactaagtggttcctccagtgctttattgacagaagccccttcacactcacc
ctgcgtttatgggacatctatattctggagggggagaagatgctgacggccatggcttac
acaaccctcaagttacacaagaagcgtttgctgaagtttcagttggaggacctgagggag
tttcttcaggagcagctggctgcttcgttcttacttccagatgacatagtggtggaacaa
ctacaggctgccatgtcggagctacgcagtaaaaagttggacctacctcctccggcaaag
tcagaggagctaccaaagaagccccttggtcaagagaggccgattcacctgctccctctg
cagccaagctgtcctcttgaagtcaaaagtgatctgcagcccatcagccagtctaataag
gagagcatcaccccagagcacaccaacccccaagcctccaaaagccacaacaggtcaagc
acaccctccctgctagcggctgattcagctgcattgcttccaaaagtgacaccgaagtgc
atgcctaccagagcacctccgttacctcccaaaccagcaaacccctgcgccaaggtaaat
gatgccaaagatgtgaagggaaggaaactttgtgaagccccagacactcaggaggagcct
atggaatggcccccaccctatgaagccacttctctggatgatcctagcatgcatatagag
atgttggacttgccagagctgccacctcccccattgatttactctacagaagaagagcaa
acaattagtccaccggcccagaacctttccccgcccccatcggtggcaacgttaaagcat
tctccagaggcgccaaccaagtcgctggtgtcttctccctgcggcttcacatcatcttcc
tctcccaggcaccctccccccaagcccactaaatttccagtgtccctgtacgttccagca
tcttcggccgacaggcgcccttccaacacctcccagtacgacaacctttccgaggctgat
gatgacgatcgttgcccagagaggttgttgggctccacccccgaggaggttcctgtccac
agagactacgaccccgctctatatccgctgcctccacctcccatcttcatcccgtcatca
ccgtctcctctgctgtccttacactgcactcttcccagtttgcctcaggagtcagaatat
gaaggagatgaccgctgggtggagggctccattatcatcccatcccctccgcccaacttt
gcagacagactctctccccagccgtgtcacacaaccacctcgccccctacttactctaag
cctttcactcggggccccagggaccattctgccttcccggcgccactcttatacaccagg
tctcccccgggccaccccaggttctcaggacagtctgcgttgggagtgcctgaggtgcga
tccagcccagacttttgcaggatgccgcctgcaggacagcagcctccaaagtcagtcacc
ttttaa
DBGET
integrated database retrieval system
