KEGG   Syngnathus scovelli (Gulf pipefish): 125970676
Entry
125970676         CDS       T08785                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125970676
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sscv01009]
    125970676
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscv03021]
    125970676
Protein phosphatases and associated proteins [BR:sscv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125970676
Transcription machinery [BR:sscv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     125970676
    Little elongation complex (LEC)
     125970676
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 125970676
NCBI-ProteinID: XP_049579192
LinkDB
Position
6:complement(5838250..5853323)
AA seq 577 aa
MAALRQERRYGLSCGKIHKNSPNRTLYHVKLTDTAIRTLETYQNLKASLPNQTSICFKGS
QGYIKIPTSESPDGFRVFSFYLSSDSKDKPQSSFDCIHQFVSGEGKDQLESQGSIQDKIT
VCATDDSYQATRERMSQVEKDIWSRSAIEIKPGPSKCVKVHRKQGPVAGSDGSNKHSPGN
KRSLVPSPAAHRPLRERVVHLLALKPYKKPELLLWLERERAAPKDKADLTSVLDEVGKLN
LKDNSYSLKDELYRHVQRDWPGYLDEEKQLIHRLLIRKLQPLHSSGGQLRSPQGSQSSHK
APGDSPSRFSPAKTLSVKRPLDPSNFQSPKKQRLLEHCLQRQSPSHVDDSTDRAQSSSDH
KGDNHLRACPNGLHSPHKLSDSLSAVPKTASKSLKSPNADASLCTDQQLSNALHKKKKSK
KHKEKERERLKAEWMVENSPDLKKSQENLKGEKTPVRQTTKKDLPDFFLKYGPITSLEQR
EQYKEDFCSEYDEYRALHDRIGAITEMFVQLGSKINTLSAGTQEYKLMEEQILQKYRKYK
KKFPGYREEKKRCEYLHQKLSHIKGLISDYDRAQELS
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggcagcgctgaggcaggagcgtcgctacgggctctcctgcggcaaaatccacaaaaac
agccccaatcgaacactatatcacgtcaaactcactgacaccgccatccggaccctcgaa
acctaccagaacttgaaggcatcactgcccaatcagacgtcaatttgcttcaaaggaagt
caggggtacatcaagatcccgacttcggaatcccccgatggatttagagtcttctcgttc
tacctgtccagcgacagcaaagacaaaccccagtccagcttcgactgcattcatcagttt
gtttccggggagggcaaggatcagctggagagccagggcagcatccaggacaagatcact
gtttgcgccaccgacgactcataccaggccacacgggagcgcatgtcccaggtggagaag
gacatctggagccgttcggccattgagatcaaaccggggccaagtaagtgcgtgaaggtc
cacaggaagcagggtccggttgcgggctcagacggcagcaacaagcactcgcccggcaac
aagaggagccttgttcccagtcctgcggcacaccggcccttgcgagagcgcgtggtccat
ctcctggccttgaaaccgtataagaaacccgagctgttgctgtggctggaaagagaacgg
gccgctccgaaggacaaggctgacctgacctcggtgctggatgaggttggcaagctgaac
cttaaagacaacagctattctctgaaggacgagctctacagacacgtccaaagagactgg
cccggctacctggacgaggagaagcaactcatccacaggcttctcatcaggaagcttcag
ccactccacagcagcggcggccagttgagaagtccccaaggcagccagtcatcccacaaa
gcgcccggggactccccttctcgcttcagccctgcaaagacgctctcggtgaaacgccct
ttggatccatccaactttcaaagccccaaaaaacaaagactcctagagcactgcttgcaa
cgccagtctccgtcccacgtggacgacagcaccgaccgggcccaaagttcctcggaccac
aaaggtgacaatcatctccgggcctgtcccaatggcctgcactcgccccataaactgagc
gactccttgtccgccgttcccaaaacggcttccaagtcgctaaagtcccccaacgcagac
gcttccctttgcactgaccaacaactgtccaacgctctacataaaaagaagaagtcgaaa
aagcacaaagagaaagaacgcgagcgcttaaaagcggagtggatggtggaaaacagcccg
gacctgaagaagagccaagaaaatctcaaaggagagaaaacccccgtcagacaaaccaca
aaaaaggacctgccggactttttcttaaaatacggcccaattacatcactagaacaacgc
gagcaatacaaagaagacttctgctctgagtacgacgaatacagagcccttcacgaccgc
atcggagccatcaccgagatgtttgttcagttaggctcaaagatcaacacgctctcggcg
ggaacgcaagagtacaagctaatggaggagcaaatactacaaaagtaccggaagtataaa
aagaagtttcccggctacagggaagagaagaaacgatgcgagtacctccaccagaaactg
tcacatatcaaaggtctgatctcagactacgaccgggcgcaggagctctcgtag

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