Syngnathus scovelli (Gulf pipefish): 125970708
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Entry
125970708 CDS
T08785
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125970708 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125970708 (tubgcp6)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
125970708 (tubgcp6)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
125970708 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
IMS
Motif
Other DBs
NCBI-GeneID:
125970708
NCBI-ProteinID:
XP_049579232
LinkDB
All DBs
Position
6:16404457..16417030
Genome browser
AA seq
1819 aa
AA seq
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MYSSSQHPIKSGCNTSASITELLAALCDSSLAGVSWKRRALGGVSREGFHKALKKRAYGA
LLSKLFQDGAKPPVTLGPSSPPRNRVLMICFDLRVAGCREEAERLENLLEKLPEGVASGL
SEVDSVLELLVHLAGTSPPPPPSFSRDYMRRERPVLRRPAPWPYQSEELQRLEARAWGLV
CGEEWASLERLYGTQGLMEAQPGAGLMALRTKTDVEERFEKETRLTLFGALQHTRTSDLD
IRLDLPPVPSDVDVTGLSIRVPPCLDQSDDEGFQSGSNLTPDSLSEPSPGPEMDVWEALR
TFEPAVRCCWESVGWPPGRRESLYLSESGREAFDQLYRLWEGEMRVVSGSVPSPILPLPV
DSQGELVGDLLNVLIGVASATFPLNQSVEFDVRPGVCVSGASPESVSRLLGELAQYGTYY
LRLSRFSLQSPEKKGLVFQAFTGGLRKYLHYYRACVLSTPPRMSLLTVGFLFRKVGQQLR
YLSELCRVDGPPGGDRPAFPAGVKLLSHLYNEVQNNCSNENYPVLLSLLKSSCEPYTRFV
SDWVYSGVFRDVYGEFMIQVNEEYLGFRDKHFWVQGYTLISQDVEECVPVFLRHMANDVY
VCGKTINLLKICCPQHYICLSELPVPRIAVTFSLQEVEAIERDCAVYRGRMERIAKHSAV
SREVQAQRAEEARQELINQVRASAAKTLESIRGRQVSQRLAEEARKRESFQELKQHLEKE
QEWRTLAKKKQEEDDFSFARELRDREKRLQALEEQLEQRARKELIAQYSHLSEEAARKER
RALWRSQRTTLDEARSDFFAREQQELQAILEKYPLGQERPPVPSPQQPPALESPSEQLVE
KKPENPEESKESHAVDTSAFISGDFLPDLLNVDHTKEIAEACPTAKLVDYDFSAPFSPLE
GIAGQPSLARLRPLCGSSPLQPDVIRNHPSFSHFPVGEHMPLVQESLPAANPFGHVSECS
FSFRHNIPGATVNVSRANGPPPQGATLLGQGDASVRLERDKLVGAQDATAAKHKEDAPHL
SICSRVCSLASPLKRITVPSPAHPSDSHIKIGELVSDVDAPQPSQNVHGHSSDTNIKVGE
NVSDFVHPLLVRNPHGHASDAHLKVGGNDSDFLSPLPVPNVHGHASDSNIKVGENVSDFV
HPLLVRNPHGHASDAHLKVGGNDSDFLSPLPVPNVHGHASDSNIKVGENVSDFVHLRPVR
NPHGHASDAHLKVGGNDSDFLSPLPVPNVHGHASDSNIKVGENVSDFVHLRPVRNPHGHA
SDAHLKVGGNDSDFLSPLPVPNVHGHASDSSIKVGENVSDVSQARPRWSKHGHASDSTLQ
VGCVVSGSAPAAAPESGLSHVSDSSLGGGCVVTQSEPLPSPLPGSQYGHSSDSALGVGCV
VLGVPNPSLSTERELDGNAGHKPDAEEAGSFDLSPGEKSEQEYLLALSAHYQVEHYEDCS
SLMASSPECQLLKRVIRGLPAEPALRHATDATAVHLSEMVSLPVLIKHSVTAPLITHVSL
VNKAVVDYFFVELGVERHFEALRHFLLMEDGEFAQSLSDRLFEKLGSGQTPGELLTPLVL
NSILSKALQYSLHGDTPLAANFTFALRFLPDTFHPHAPDSLNCLELRYKVAWPLNIIITD
TCMNKYNRLFSFQLQLKHMVWSLRDVWFHLKRTAVVKGAGRSVQFRQLQLYRHEMQHFVK
VIQGYIANQILQVSWSEFTAKMAAACDLDAIHRTHADYLNRAIFRALLTEKAAPVMNIIH
SIFSLILKFRAQLIALPWTSQQGETVHPSFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQ
PHLEDFLLRINFNNYYKDS
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgagttctcaacatcccatcaagtccggctgcaacaccagcgccagcatcaca
gagctgctggctgccctatgtgacagcagcctggctggcgtgtcgtggaagcgtcgggcc
ctgggaggcgtctcaagagaaggcttccataaagctctgaagaagcgagcctatggcgct
ctgctgtccaagcttttccaggatggcgccaaaccacccgtcaccttggggcctagctcg
cctccgaggaacagagtcctgatgatatgttttgacttgagagtagctggctgccgggag
gaggctgagaggctggagaatctgctggagaagcttccagagggggttgcctccggcctg
agtgaggtggattccgtcctggagcttctggtgcacctggctggtacctcgcctccgccg
ccgccctccttcagtcgggactacatgaggcgggagaggcctgtgctgcgcagacccgca
ccttggccttatcagagcgaggagctgcagaggctggaggcccgggcctgggggctcgtc
tgcggggaggagtgggcgtccttggagcgcttgtacggaactcagggtttgatggaagct
cagccaggtgcaggcttgatggctctcaggactaaaacagacgtggaggagagatttgag
aaggagaccaggctgaccttgtttggagccttgcagcacactcgaacctcagacctggac
atcagactggaccttccacctgtgcccagcgacgtagatgtaactgggctctccattagg
gtcccgccgtgtttagatcagtctgacgacgaaggcttccagtctggctccaacctgacg
cctgactctctgtcggagcccagccccggtccagagatggatgtgtgggaggctctgcgg
acatttgagcccgccgttcgctgctgctgggagtcggtcggctggccaccgggcaggaga
gaatctctctacctgagcgagagcggcagagaggcctttgaccagctctaccgactgtgg
gagggcgagatgagggtggtcagcggcagcgtgccctccccgattctcccgctgcccgtc
gactctcagggggagctggtgggcgacctgctgaacgtgttgatcggcgtggcgtccgct
acttttcctctcaaccagagtgttgagttcgacgtccgccccggcgtgtgcgtgtcggga
gcctctccggaaagcgtgtctcgtctcttgggggagctggcccagtacggcacctactac
ctcaggctcagtcgcttctcgctgcagagccccgaaaagaagggcctggtcttccaggcg
ttcacgggaggcctgaggaagtacttgcattattaccgagcgtgcgttctcagcacgccg
cccagaatgagcctgctgactgttggcttccttttccgcaaagtcggccaacaactcagg
tatctgtcggaactgtgccgtgtggacgggccccctggtggcgaccggcccgccttccct
gcgggcgtgaaactgctctcccacctttacaacgaagtgcagaacaactgcagcaacgag
aactacccggtgctgctgtctctcctcaagagcagctgtgagccgtataccaggttcgtg
tccgattgggtgtacagtggcgtgtttcgagatgtctatggcgagttcatgatacaagtc
aacgaggagtacctcggcttcagagacaaacatttctgggtccaaggctacactttgatc
tctcaagacgtggaggagtgcgtgcccgttttcctgaggcacatggccaacgacgtgtat
gtctgcgggaagaccatcaacctcctgaaaatttgctgccctcagcactacatctgcttg
tcggagcttcccgtgcctcgtatcgccgtcaccttctccctgcaggaggtggaggccatc
gagagggactgcgccgtgtaccgcggacgcatggagaggatcgccaagcacagcgccgtc
agtcgggaggtgcaggcccagcgagctgaagaagcgcgccaggagctgatcaatcaggtc
agggcgtcggcagccaaaaccctggagagcattcgcgggcgccaggtgtcacagcgtctg
gctgaggaggccaggaaaagggagagcttccaggagttgaagcagcacctggaaaaggag
caggagtggcgcactttggccaagaagaagcaggaggaagacgacttcagctttgccaga
gagctgagggaccgtgagaagagacttcaagcccttgaggagcaactggagcagagagcc
aggaaggagctgatcgcccagtacagccacctatcagaagaagcggcccgtaaggagcgc
cgggccttgtggaggtcgcagagaaccacactggacgaggctcgatcagacttcttcgcg
cgggagcagcaagagttgcaggccatcttggaaaagtaccctttgggccaagaaagacct
ccagtgccatcacctcagcagccgccagcactggaaagtccctcagagcagttagtggaa
aagaaaccagagaatcctgaagaatccaaagagtctcacgcagtggacaccagcgccttc
atctccggcgactttctccccgacttgctaaacgtcgaccacaccaaggagatcgccgag
gcgtgtcccacagcaaagcttgtagactacgacttcagcgcccccttcagcccgctggaa
ggaatcgccggccagccatccttggcacggctccggcccctttgcggttcttccccactg
caacctgacgtgatccgcaaccatccctccttttctcatttccccgtgggggagcacatg
cctctggtccaagagagcctccccgcggccaaccccttcggccacgtttccgagtgcagc
ttctctttcagacacaacatcccaggggcgactgtaaatgtctcccgagctaacgggccg
cctcctcagggcgccacgctgctcgggcaaggcgacgcttctgtccgtctggagcgagac
aaactcgtgggtgctcaagatgctacggcagcgaaacacaaagaggatgcgccccatctt
tccatttgtagtcgagtttgttctttggcgtcacctttgaagcggatcaccgtcccttcg
ccggcgcatccctcagactcgcacatcaaaattggcgagctcgtctcagacgtggacgcg
ccgcaaccttcccaaaacgtccacggccactcctcggacaccaacatcaaagtgggcgag
aacgtgtccgactttgtccatccgctcctggtccgaaacccccacggccacgcctccgac
gctcacctcaaagtcggaggaaacgattcagacttcttgtctccgctccccgtgcccaat
gtccacggccacgcctccgactccaacatcaaagtgggcgagaacgtgtccgactttgtc
catccgctccttgtccgaaacccccacggccacgcctccgacgcccacctcaaagtcgga
ggaaacgattcagacttcttgtctccgctccccgtgcccaacgttcacggccacgcctcc
gactccaacatcaaagtgggcgagaacgtgtcagactttgtccatctgcgacccgtccga
aatccccacggccacgcctccgacgcccacctcaaagtcggaggaaacgattcagacttc
ttgtctccgctccctgtgcccaacgtccatggccacgcctccgactccaacatcaaagtg
ggcgagaacgtgtcagactttgtccatctgcgacccgtccgaaatccccacggccacgcc
tccgacgcccacctcaaagtgggaggaaacgattcagacttcttgtccccgctccccgtg
cccaacgtccacggccacgcctccgactccagcatcaaagtgggcgagaacgtgtccgac
gtgtcccaagctagaccacgatggagtaaacacggccacgcttccgactccaccctccag
gtgggctgcgtggtgtcgggctcggcgcccgccgcggcccccgagagcggcctaagccac
gtctcggactccagcttgggcggcggctgcgttgtcactcagagcgagccgcttccgtcc
ccgctgccgggcagccaatacgggcactcgtcagactctgctctcggggtgggctgcgtt
gtgttgggcgtaccaaacccgtcgctttccaccgaacgcgagttggacgggaatgcaggt
cacaagccggatgccgaagaagccggcagctttgacttgtcccccggagagaaatccgaa
caagaatatctcctggcgctgtccgctcactaccaggtggagcactatgaagactgctcc
agcctcatggcatcatcccccgagtgccagttactcaagcgcgtgatccgaggcctcccc
gctgagcccgccctgcgccacgccaccgacgccacggccgtgcacctcagcgagatggtc
tccctgccggttctgatcaaacactcggtcaccgccccgctcatcacgcacgtgtcgctg
gtcaacaaggcggtggtggactacttctttgtggagttgggggtggagcgacattttgag
gccctgcgccacttcctgctgatggaggacggcgagttcgcgcagtcgctcagtgatcgg
ctgtttgaaaaactgggcagcgggcagacccccggcgagctgctcacccctctggtgctc
aactccatcctcagcaaggcgctgcagtacagcctgcacggcgacacgccgctggccgcc
aacttcaccttcgcgttgcgcttcctgcccgacaccttccacccgcacgcccccgactcc
ctcaactgcctggagctgcgctacaaggtggcctggccgctcaacatcatcatcaccgac
acctgcatgaacaagtacaaccggctcttctccttccagctgcagctcaagcacatggtg
tggagcctgcgagacgtctggttccatctcaagaggacggcggtggtgaaaggcgccggg
cgctcggttcagttccgccagctgcaactgtaccgacacgagatgcagcacttcgtcaag
gtcatccaaggttacatcgccaaccagatcctgcaggtgtcctggagcgagttcaccgcc
aagatggccgccgcctgcgacctggacgccatccatcgcacacacgccgactaccttaac
agggccatttttagggctttgctgaccgagaaggcagctccggtgatgaacatcatccac
agcatcttcagcctgatcctaaagttccgtgcacaactgattgcgcttccctggaccagc
cagcagggggagacagtgcacccaagcttcatcgccatgcagcaatcgtacaacaccttc
aagtattactcacacttcctcttcaaagtggtgaccaagctggtgaacagaggctaccag
ccgcatttggaagacttcctcctacgcatcaacttcaacaattactacaaagactcatga
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