Syngnathus scovelli (Gulf pipefish): 125970814
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Entry
125970814 CDS
T08785
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125970814 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125970814 (exosc6)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125970814 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125970814
NCBI-ProteinID:
XP_049579424
LinkDB
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Position
6:complement(9447486..9449473)
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AA seq
274 aa
AA seq
DB search
MPVDNKRVRGPELSQSPSLFACKPAAVFSSHGPRADGRQRDQVDVRPVFVRCGLVSQAKG
SAYMEAGDTKLMCCVYGPRETERKDDTDMKCGRLTTDMRFAPFSCPERCSWIQGSQDKDF
SLMLHESLQPALCLHKYPRSQIEVNVMVLEHSGSVLAHAVTCASLALADAGIEMYDLVLG
CAIRQDGGSYVVDPTYAEENGSGSPSGDNQGRLTVAFLPSLNQVSGLQSDGEMTEETLSA
GVRTCIEGCYKIYPVIQQALAKAVRRAAPPPSES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgacaacaaacgagttcgaggcccagaactctcccaaagtccgtctttgttt
gcgtgcaagccagcggcggttttctcctcgcacggcccccgtgcagatggtcgacagcga
gaccaggttgacgtccggcccgtttttgtcaggtgcgggctcgtgagtcaagctaagggt
tccgcgtacatggaggctggagataccaagttgatgtgctgcgtttatggtcccagagaa
acggagcgtaaagatgacaccgatatgaagtgtggaaggttgacaacagacatgcggttt
gctccattttcttgcccggagagatgctcctggattcaagggagtcaggacaaggacttc
tctttgatgctgcatgaaagtctgcagcccgccttgtgcctccacaaataccctcgctct
cagatagaggtcaacgtgatggttcttgaacacagcggctcagttcttgcacacgccgtc
acctgtgcgtccctcgcgctagcagatgcgggaatcgaaatgtacgacctggtgctcggc
tgcgccatccgccaggacgggggctcttacgtggttgacccaacatatgcagaggaaaac
ggaagtggttcgcccagtggtgacaatcagggaaggctaaccgttgcattcctccctagc
ttgaaccaggtgtctgggctgcagtctgatggagaaatgaccgaagagactctctctgct
ggggtgcgcacctgcattgagggttgctataagatctatccagtcatccaacaagctctg
gccaaggcagtgcgaagggcagcccccccaccatcagagagctga
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