Syngnathus scovelli (Gulf pipefish): 125970975
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Entry
125970975 CDS
T08785
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125970975 (dennd4a)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125970975 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
125970975
NCBI-ProteinID:
XP_049579738
LinkDB
All DBs
Position
6:complement(19316327..19330727)
Genome browser
AA seq
1662 aa
AA seq
DB search
MMEDKAPRVADYFVVAGLTDPTKLLEEELHFDDTAPKSVKPNAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISGSSSQRIYITYRRAPKSQPHTSLAVTDVCVIVPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANMIACKAGLLCRYPEEDYESFPLPESVPMFCLPMGATI
ECWPAHTKQALPVFSTFVLTGASGEKVYGAAIQFYEPYPEELSERQLSQLGLLSSDLGPG
GTRSVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHVAHFMQNVPFPSTQ
RPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVHS
LRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVDSRYFDLYVPPA
DISCVDLDTNTISQKEDKKALTWKMLPGRACKNLLNSLNKLHQQLTEGGYLSHEDVHMEH
AVADGELNGGKSLQTLELEIQEAFLRFMAAILRGYRSYLQPITQAPSEKTTDVSSLFDIQ
GFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECADKLSTVAKIDSEK
PDDARLIELDESHRSEHTVYVNPPELPLLPEGEEHPLCYSYVGFPVLNSQLLQPMEGANP
PSAGTASRHCSPSSPTAIFRRSKQEMKSAQRMAQAYSSMPQKWSKCLQRHCYGLWFICLP
ALVETCPSKVRALRTAYDVLRRMQEKKLQAPDEVCYRVLLQLCGQYSQPVLAVKVLFEMK
KAGIQPNAITYGYYNKAVLESTWPSTTRGGFFLWGKLRNVVLGVGQFKQVGKKQAQSQRE
THSSDGSDLDTVSHGSLDSANDSAERNSIDADFNKMDSSDDGFSTGGQSDQGYDSLSKEE
MCCREGENIPPVENKGMKLHNNPDSLLSSPSLSDNMTQVERPKSLDWSLGSGAPKLTVPH
LNSNKQHHAATDKLSGLEEETAESDGEQNPTRRSDCGPSSRSDIEAGFDPLTQMATAQEC
AQGNVSTPTARRELAEEIEMYMNNNNSPLRSCRSPQADSPNQSSPSSQSTRAPALIRSNT
LLPLPVKSRERLRTSPSLPLGVCSKGRERPSSLVLPSSPTPSASSFSMDSLFTPSLDSFK
SSVLLAGKGVAEKASRLYSRLSSQTSLTQDSNCDRMSVSSLASGDADCTSLVDNDTFLDQ
ADSLVSPQHAGAARLRRSPGAGHTHTSSLGSPDRVFRHNSFSGGLTVPSRSLHTPDSSPD
INHFRPSPTYTIEVMMSSCSLCKTCDSLVYDEEIMAGWTANDSNLNSTCPFCGSAFLPFL
NVEVKDLRPSLRSPQESVPVAKEDTSVSLNPEAKMSEAVSSSPRNAGTSEPVTVPYLSPL
VLWKELESLLVNEGEQAIYSPGVVDQHPIVFWNLVWFFRRLELPSNLPALILASQHCRHG
DQTLSGVSSEDSKQVLVRIMWDNLKLHQDKVHPCYILWNTHCANSLVRSGLCEEGQLFTV
ELLQNLVRSIKKSDIYQPMSQIIQLLGPELGFKRQRSLYRDLLFLTLVSLGKNNININAF
DREYKLAYDRLTPSQVKLTHNCDRPPGAGVMECRKTFGEPSL
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagcgccccgtgtcgccgactactttgtggttgcgggcctcactgac
ccgacgaagcttttggaggaggagctgcactttgatgataccgcaccaaaatccgtcaag
cccaatgcgcccatcacggacgttgccgtggtgatccgctccctgggcgaagaggtaccc
cccggtttcacctgtgtggaaagcaccccctcgggcctgtctgccgagctcaatggagcc
agtctcagagggccgcagattttcctgtgcttcaagcgaggcagagataagcctccgctg
acagatcttggggttttgtacgaatggaaagaaaagctgaagcctggatgtcacatcgtt
cagaccacgccctcaggtcgccccgccaacatcagcggctcgtcatcgcaacgcatttac
atcacctaccgccgcgctcccaagagccagccgcacacctcgctggccgtcacagatgtc
tgcgttattgtgcccggcaagggggagacaccccctcacactttctgcaaggtggacaag
aacctcaacagcagcatgtggggatcgtcggtctacttgtgttacaagaagtctctggcc
aaagcaaacatgattgcgtgcaaagcaggtctgctgtgcaggtaccccgaagaggactat
gagtcctttccactgcctgagtccgtgcctatgttctgtctgccaatgggggcaaccatc
gagtgctggcctgctcacactaaacaagcacttcccgtcttttccacattcgtcctgacg
ggagcatcaggagaaaaggtgtacggagcagcgatccagttttacgagccttacccggag
gagctgtccgagcgtcagctgtcacagctcggcctgctcagctccgatttgggacccggc
gggaccaggagcgtttatagcaacaagagcatctgtctcctctcccactggcccttcttc
cagtccttcaggagcttcctcacgttcctctatcgatactccatctcgggaccacacgcg
ctgcccattgagaagcacgtggctcacttcatgcaaaatgtgccgttcccctccacacag
aggccgcgcatcctcgtgcagctctcaccacatgacagcctgatattgagccagcccgtg
tcctctccgctgcctctcagcggcggaagcctctccacgttactcctgaatctgggtccg
aaaaatgctgccaccttgctggtgttggctgtcaccgagcacaagatcttggttcattcc
ctgcggcctgccgtactcaccagcgttaccgaggcgcttgtgtctatgattttccccttc
cattggccgtgcccgtacatccctctgtgcccgctggccctggcaggtgtcctcagtgcg
ccatgtcctttcattgtgggcgtggattcccgatactttgacctttacgtgcccccggct
gacatcagctgcgtggatttggataccaacaccatttcccagaaagaggacaagaaggct
ttaacgtggaaaatgttgcccggaagagcctgcaagaatcttctgaattccctcaacaaa
ctccatcagcaactcacggagggtggttacctaagccacgaagacgttcacatggagcac
gcggtggctgacggcgagctcaacggcggcaagagtcttcaaactctggaactggagatc
caggaagcctttctgcgcttcatggcggccatcctccgaggttaccgttcctacttgcag
cccataacgcaggccccctcggagaagaccaccgacgtcagctccctttttgacattcaa
ggcttcttgaaaagccgagaccgctcacatcagaggttctactcgctcatgaccaagacc
caaatgttcagccgcttcattgaggaatgctcctttgtcagtgacaaagatgcaagtctg
gctttcttcgacgagtgcgctgataagctctccacggttgctaagattgacagcgagaag
ccagacgacgccagactcatcgaactggacgaatcccatcgcagtgagcacaccgtttac
gtcaacccgccggagctgcctctgctgccggagggagaagagcatcctttgtgctatagc
tatgtggggtttccagtgctgaactcccaacttctacaaccaatggaaggagcgaatcct
ccgtcggcgggcacggcttcacgccactgcagcccgtcaagtccgacagccatctttcga
cgctccaagcaggagatgaaatctgctcaaaggatggcgcaagcgtattcgtcaatgcct
cagaagtggtccaagtgtctgcagcgtcactgctacggcctgtggttcatttgcttgccc
gctttggtcgaaacgtgtccctccaaagtgcgggcgctgcgcacagcctacgacgtgcta
aggaggatgcaagagaagaagctccaggctcctgacgaggtgtgctaccgtgtattgctg
caactgtgtggtcagtacagtcaaccagttctagcggtcaaggtgctgtttgagatgaag
aaggctgggattcaacccaacgccatcacgtacggctactacaataaggcggtgttggag
agcacgtggccgtccaccaccagaggcggcttctttttgtgggggaagctgagaaatgtg
gtcctgggcgtcggccaatttaagcaagttggaaagaaacaagcacagtcacaaagagaa
actcactcgtcagacgggagtgatctggacacagtcagtcacggcagtttggacagcgca
aacgactctgccgagcgcaactccatcgacgccgacttcaataagatggactccagcgat
gatggatttagcacaggtggccagtcagaccaaggttatgattctttatccaaggaggaa
atgtgctgcagagaaggtgaaaatattccaccggtggagaacaaaggaatgaagctgcac
aacaatccggacagcctgctttccagtccgtcattaagtgacaacatgacccaagtggag
cggccaaagtctctggactggtcgctcggatcgggagcgcccaagctcaccgtccctcat
ctcaactccaataagcagcaccacgcagctactgacaaactgagcgggctggaggaggag
acggcagagtctgacggtgaacagaacccgacccgaagaagcgactgcggaccatccagt
cgatccgatatcgaggcggggtttgatcccttgacccagatggccacggcgcaagagtgc
gctcagggcaacgttagcacgccgaccgcccgccgcgagctagccgaggagatcgaaatg
tacatgaacaataacaacagtccgctgaggagctgtcgcagtccccaggcggattcgccg
aaccaatcaagcccctcctcgcaatccacccgagctcccgcgctgatccgttccaacacc
ctcctaccgctacccgtcaagtcccgagagcggctcaggacgtcgccgtcgctccctctg
ggcgtttgtagcaaaggcagggagaggccttcatccttggtgttgccctcgtcccccact
ccctccgcctcctccttctccatggactccctgttcacccccagcctggacagcttcaag
agcagcgtcctcttagcgggcaagggcgtggccgagaaggccagccgcctctactcccgc
ctttcctctcaaacgtcattaacgcaggattcaaactgcgatcgtatgagcgtgtcctcg
ttggcctcgggggatgccgactgcacctcgctggtggataacgacacctttctcgaccaa
gcggacagcttggtgtcgccgcagcacgccggcgcggcccggctcaggaggagccccgga
gcgggccacacccacacgagcagcctcggctcccccgacagggtcttccgacacaactca
ttctctggcggtttgacggttccttcgagaagtcttcacactccagattcctcacccgac
ataaaccactttcgtccttctcccacttataccattgaggtgatgatgtccagctgctcg
ctttgcaagacttgcgactctctggtgtacgacgaggagatcatggccggctggacggcc
aacgactccaacctcaacagcacgtgtcccttctgtggctcggccttcctgcctttcctc
aatgtggaagtcaaagatctgaggccctctctcagatctccccaggagtctgttcctgtt
gccaaggaggacacgtcagtgtcactcaaccctgaagccaaaatgtcagaggcggtctcc
tcttccccaaggaatgctgggacgtctgaacccgtgactgtgccgtatctgagcccactt
gttctttggaaggaactggagagcctccttgtgaacgaaggagagcaggccatctactcc
ccgggggttgtggaccaacaccccattgtcttctggaaccttgtgtggttctttaggagg
ctggagctgcctagtaatctgccagctcttatcctggcctcccaacactgtcgccatggt
gatcagacgctttccggcgtttcctctgaggacagcaaacaggtgctggtgaggatcatg
tgggacaacctcaagttgcaccaagacaaagtccacccttgttacatcctttggaacacg
cattgcgccaattctctggttcgctcgggcctgtgcgaggaaggccagctcttcacagtg
gagctccttcagaatttggtgaggagcatcaagaagagtgacatctatcagcccatgagc
caaatcatccagctgctggggcccgagttgggttttaaaagacagaggagcttgtacaga
gatttattattcctcactctggtgtcgttaggaaagaacaacatcaatatcaatgcattt
gaccgggagtacaagctggcctacgaccgcctcacccccagtcaggtcaaactgacgcac
aactgtgatcgcccccccggagctggggtcatggagtgcaggaagactttcggggagccc
agtctgtga
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