Syngnathus scovelli (Gulf pipefish): 125970983
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Entry
125970983 CDS
T08785
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125970983 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125970983 (arih1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125970983 (arih1)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125970983 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-RING_14
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125970983
NCBI-ProteinID:
XP_049579750
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All DBs
Position
6:19270607..19278470
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AA seq
529 aa
AA seq
DB search
MDSDEGYTYEYDDEEEECSEDSGEEEPEDDTLELGEVELVDPVVAAAERDECGDTVGGGQ
GPGEEEEEDYRFEVLTAEQILQHMVECIKEVNEVIQNPATITRILLSHFNWDKEKLMERY
FDGNLDKLFSECHVINPSKKPRIRPPINTRSSVQDMPCQICYLIFPNSYFTGLECGHKFC
MQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE
CNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCD
DDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYN
CNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQH
NMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGY
LERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgagggttatacctatgaatacgacgacgaagaggaggaatgtagcgag
gacagcggcgaagaggagcctgaggacgacaccttggagctcggcgaggtggagttggtc
gatcccgttgtggccgccgcggagcgggacgagtgcggcgatacggtgggaggcggtcaa
ggccccggcgaggaagaggaggaggactatcgcttcgaggttttgaccgctgagcagatc
ctccagcatatggtggagtgcatcaaggaggtcaacgaggttatccagaatcctgcaaca
attacacgcatccttcttagtcacttcaactgggataaagaaaaactcatggaaaggtat
tttgacggcaatctggacaagctcttctcagagtgtcacgtcatcaaccccagcaagaaa
ccccgcatccgtcctccgatcaacacccgatcgtccgtgcaggacatgccctgtcagatc
tgctatctgattttccctaactcttattttaccggcttggagtgtggacacaagttctgc
atgcagtgttggggtgattacctgactactaagattatagaagaaggaatgggacagact
atttcttgccctgctcatagttgtgacattttggttgatgacaacacagtcatgcggctc
atcacagactcaaaagtcaagttgaagtaccagcatttaattacaaatagttttgtagag
tgcaatcgactgttaaagtggtgccccgctccagactgccatcacgtcgttaaagtccag
tacccagatgccaaaccagtgaggtgcaagtgtggccgtcaattctgcttcaactgtgga
gagaactggcacgatcctgtcaagtgcaagtggctgagaaagtggattaagaaatgtgac
gatgacagcgaaacttcaaactggattgctgcaaatacaaaggagtgtccaaagtgccat
gtgaccatcgagaaagatggcgggtgcaatcacatggtttgtcggaaccagaactgcaaa
gctgagttttgctgggtctgcctgggaccatgggaacctcatggttctgcttggtacaat
tgcaatcgctacaatgaagacgatgccaaggccgccagagacgctcaagagcgctcccgg
gcggccttgcagaggtacctgttctactgcaaccgctacatgaaccacatgcagagcctg
cgctttgagcacaagctgtacgctcaggtcaagcagaaaatggaggagatgcagcagcac
aatatgtcctggatcgaggtgcagttcctgaagaaggccgtggacgtgctgtgccagtgc
cgctccacgctcatgttcacttacgtatttgccttctacctcaagaagaacaaccagtcc
attatttttgagaacaaccaagccgacttggaaaacgccactgaagtgctgtctggctac
ctagaacgagacatctcccaggattccttgcaagacatcaagcagaaagtacaagacaag
tacagatactgcgagagccggcgacgggttctgctgcagcacgtgcacgaaggctacgag
aaggacttgtgggagtacattgaggattga
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