Syngnathus scovelli (Gulf pipefish): 125971000
Help
Entry
125971000 CDS
T08785
Symbol
nfat5a
Name
(RefSeq) nuclear factor of activated T-cells 5a isoform X1
KO
K17335
nuclear factor of activated T-cells 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125971000 (nfat5a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
125971000 (nfat5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
125971000
NCBI-ProteinID:
XP_049579772
LinkDB
All DBs
Position
6:complement(7643171..7665540)
Genome browser
AA seq
1461 aa
AA seq
DB search
MPSDFVSLLSSDLDLNSPKSLYSKESVYDLLPKELQLQQSSTQTDSTTMSQKSGGEAGPP
PSAALASDATSSTSNPSASSSLAMGAPSSVGPSSSDHLKAPHHLHTTGGDGAVASEVQVM
EAGAMSAPNRSNSGAGTAAGDPGSGLGVQQPQNTPSKRRPVLSISPPPEDLFDESQMSCL
EETPVAGAPGPESEQSSSIWADDSVSNFSLVSSFSYNDNTEVPRKSRKRTPRQRPGPKPA
PPEDSMDVFDADSAKAPHFVLSQLGPDKTSPVTSSLESGIVVKGGSLSTQFPQRSNGKEL
KMLVQPETQHRARYLTEGSRGSVKDRTQQGFPTIKLEGVSEPVVLQVFVANDAGRVKPHG
FYQACRVTGRNTTACTEVDIEGTTVIEIPLEPSNDMTLAVDCVGILKLRNADVEARIGVA
GSKKKSTRARLAFRVSIPQTDGSTLTLQVTSSPILCTQPAGVPEILKKSLHSCSVRGGEE
VFIIGKNFLKGTKVIFQENIADDSSWQAEANIDMDLFHQNHLIVTVPPFHNQSITSPVSV
GIFVMTNAGKSHEAQPFTYSPDSADNTDAQAVKTEEPSFKTCIFDGQIQTVSSDQTDCSS
QPVKRQEDTPMEVSSNPQPTNVFKQSPGPVVSVQQTLELSSSPHSSGESFQSSMPLQPED
VELPQAPSVFPSLESLNTIQKQDIAPTASFPMSGDPTIPPVTPEVPQQFLRDPQESIPSE
NSTSGGVVVVAMSQIAAPSPPQPQQSQVPLFAQEGVAQLERAVRELQAGGNTTLQQVIEA
AVAQQQQQQQQQQQQQQQQQLNSVLYSPTSAADTLQQHVQENMNSLRLGATDSSLSPQQQ
LQIQQQQMQQQHQQMQQQQQQQQQMEQFQQQQILGNLQQQQHHLQQQQQQVLGNMQIQQQ
LLLQPQDQQQLQQQQILENIQQQQLQQNQQQVLNNIQLQDQQQNHILSNLQQHQLQQQQS
QALSNLQQQQLQEQQVLENLKQQFQAELLQPQIHSNPQVQQPVSLLQQPREMLTIQTSFP
TQPPSHTSPPQQLFQSPRPIAETQSSQQQVQAALLQNTLTVLTGGNLNTEQQSTGSALYL
SPSSQSQQQQQLAFISTMETSNSQPQPVAMFHNQPQAQLSQMQQQSTPMEHQQSPQQNQQ
QSPQLSIGQQGSLFQSIPNHSQANPLPQNQLSQPQQTGLLLCTADLNPQTIIFSTQTQGS
APMGSIPVGLSQPETAEPMSFQDQSSLANTSTSTQNQQQSIFQEQQPMQVGTSSSSVPNN
QSVELFLPQASLSGLQSTLGSQELNNQATAPGTTIFVVQNTVGVVDSPGQQPPEQLFQTN
VGETVAQRGPANLFVFGIQNDTPQLLNSSGSTLPVQNQSQNTGHMQPLMEQPLAQATPTM
HSSLQSSLQAHMQTSLQNAMQANTQVTLQPVLQASIDTSLPTPMQTNLQIPSSIQNTLQG
SISAAADMGKIEDLLESLQKQ
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgattttgtctccctcctcagctcggatctcgatctcaattcccccaaatct
ctctactctaaagagtctgtatatgacctgctccccaaagagctccagctccagcagtca
tccacccagaccgactcaaccaccatgagccagaagagcgggggagaggcggggcctcct
ccatcggcagccttggcttcagatgccacatcttccacctccaacccctctgcctcctcc
tccttggccatgggagccccaagctccgttggcccgtcctcttccgaccatctcaaggcc
ccccatcatcttcacacgactggaggggatggagctgtagcgtcagaagtgcaagtcatg
gaggcaggagctatgtctgctcccaacaggagcaacagtggagctggcactgcagctgga
gatcctgggtcaggtctaggagttcagcagcctcaaaacactccatcaaagcggagacct
gtattgagcatatccccgccacctgaggacctgttcgatgagagtcagatgtcctgctta
gaagagacccctgtagccggggcaccggggccagagtctgagcaaagcagtagcatatgg
gccgatgactcggtttccaacttcagtttggttagctccttctcctacaatgacaacacg
gaggtgccgcgcaagtcaagaaaacgaacccctcgccagcggccgggccccaagcctgct
cccccagaggacagcatggatgtgtttgacgctgacagtgccaaggcgcctcactttgtc
ctgtcccagctcggcccggacaaaactagtcccgtgaccagctctcttgaatcagggatt
gtggtcaagggtggatcgctatctactcagtttcctcagagaagcaatgggaaggagcta
aagatgttggtgcagcctgagacccaacacagggctcgatatttgaccgagggcagccga
ggttctgtcaaagaccgcacacaacaaggattccctaccatcaagttggagggtgttagc
gagccagtagtgctgcaggtgttcgtagcgaatgacgcaggcagagtgaagcctcacggt
ttttaccaggcatgcagagtgactggtcgcaacaccactgcgtgtacggaagtagacatt
gagggcaccaccgttatcgagattccactggagcccagcaatgatatgacacttgcggta
gactgcgtaggaattttgaagctccgtaacgctgatgtggaggcgcgtattggtgtggca
ggatccaaaaagaagagcacccgggctcgattggcctttagagtcagcattccccagacg
gatggatccaccctcaccctacaagtcacctcatcacccattctctgtactcaaccagcg
ggagtaccagagatcctgaaaaagagtctccacagctgctctgtaagaggaggagaggaa
gtttttatcattggaaaaaactttctcaagggaaccaaagttatttttcaagagaatatt
gcagatgatagctcctggcaagctgaggctaatattgacatggaccttttccatcagaat
catttgattgtcacagttcctcccttccacaaccaatcaataacttcgccagtttctgtc
gggatttttgtgatgaccaatgctggtaaatcacatgaagctcaaccttttacatactct
ccagactcagctgataatacagatgctcaagcagtaaaaactgaggaaccttccttcaag
acatgtatatttgacggtcagatccaaactgtgtcttctgaccaaactgactgctctagt
cagcctgtgaaaaggcaagaggacacaccaatggaagtatctagcaatccacagcccaca
aacgtgttcaagcaatcgcctggcccggttgtttcagtgcagcagacacttgagctcagc
tctagccctcattcaagcggggagtcatttcagagctctatgcccctacaacctgaagat
gtagagcttccccaggcaccctctgtctttcccagtctcgagtctctaaacacaatacaa
aaacaagacattgccccaacagcatcctttccaatgtcaggagatccaaccatccccccg
gtgacaccagaagtcccccagcagttccttagagaccctcaggaaagcatcccttctgaa
aattctaccagtggtggggttgtggttgtagccatgtcccaaatagcagcaccctctccg
ccccagccacagcagtcacaagttccattatttgcccaggaaggcgtagctcagctggag
agggcagtaagggagctccaggctggaggtaacaccacactccagcaggttatagaggca
gctgtagcccagcagcagcaacagcagcagcagcagcagcagcagcaacaacagcagcag
ctaaattctgtgctttacagccctacatccgccgcagacacacttcaacagcatgtccaa
gagaacatgaatagccttaggttgggcgctacagatagttcactgtcaccacagcaacag
ctgcagatacagcaacagcaaatgcaacaacagcatcagcaaatgcaacaacagcagcag
caacagcagcaaatggaacaatttcaacaacagcaaatacttggtaaccttcaacagcaa
caacatcatctccagcagcaacagcagcaagtccttggaaacatgcagattcaacaacaa
cttctactgcagccgcaagaccaacagcaactacagcagcaacaaattctggaaaacatt
caacaacaacagttgcagcagaaccagcaacaagttctaaacaacatccaacttcaagat
caacaacaaaatcacattttaagcaatttacaacagcatcagttacaacagcaacagagc
caagcactgagcaacctgcagcaacaacagttgcaggaacagcaagttttagaaaacctg
aagcagcaatttcaggccgagttgctccagcctcagatccattccaatccccaagtccag
cagccggtctccctccttcagcaacctcgtgaaatgcttaccatccaaaccagcttcccc
acacagcccccatcgcatacgtcacccccacagcagctattccagtcgcccaggcctatt
gcagagacccagagttcccaacagcaggttcaagccgcactcctccagaacacgctgaca
gtcttgacaggtggcaacctcaacacagagcaacaatccactgggtcagccctgtatcta
tcgccgagctctcagtctcagcagcagcagcaattggcattcatctccaccatggagacg
tccaacagtcagccccaacccgttgccatgtttcataaccagcctcaagctcagctttcg
caaatgcaacagcagagcacccccatggaacatcagcaatcaccgcagcaaaatcaacag
cagtcaccgcaactttccattggccaacagggctccttgttccaaagcataccgaaccat
tcgcaagctaaccccctcccccagaatcagctctcccagccacaacagacaggtctcctc
ctctgcacggcagatctaaatcctcaaactatcattttcagcacccagacccaaggatca
gctccaatgggcagcatcccagttggactttcccaaccagaaacagccgagccaatgtct
ttccaggatcagagctccttggctaacacctcgacatccactcagaaccaacagcaaagc
atttttcaggaacagcagcccatgcaagtgggcacaagttcttctagtgtccccaacaat
caatctgtggagctattcttgccccaggcgtccctgtctggcttacagagtacgctcggt
tcgcaagagctaaacaaccaggctacagcccctggcacgaccatttttgtggtccaaaat
actgtaggcgtggtggacagcccgggccaacagcccccagaacagcttttccagacaaac
gtgggggaaaccgtggcccagcgaggaccagccaacttgtttgtgtttggcatccagaat
gacactccccagctgctcaactcatctggctcaacccttccagttcagaaccagtcccag
aacacaggccacatgcagcccctcatggaacaacccttggcccaggcgacaccaaccatg
cacagcagtctacagagcagcctgcaggcacacatgcagaccagcctgcagaacgccatg
caggccaacacccaggtgactctgcaacccgttttacaggccagcatagacacaagcctg
ccaactcccatgcagaccaatcttcagataccgagcagtatacagaatacactgcaaggc
tccatatcggcggcggccgacatgggcaaaattgaggacctactggaaagtctgcagaag
cagtga
DBGET
integrated database retrieval system
