Syngnathus scovelli (Gulf pipefish): 125971091
Help
Entry
125971091 CDS
T08785
Name
(RefSeq) protocadherin-15
KO
K16505
cadherin-related family member 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125971091
Cell adhesion molecules [BR:
sscv04515
]
Cadherins
Cadherin related
125971091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
125971091
NCBI-ProteinID:
XP_049579994
LinkDB
All DBs
Position
6:complement(17084600..17089317)
Genome browser
AA seq
811 aa
AA seq
DB search
MATTAKVKRTLLLMLFLHLHAVTGMSGWGGCLDGQDIFSRVAENSLCGEVVVDLMADPPM
EGVEWRLHGKDADWFFLDGGVIRLNSSPEKVLDREVLGPVLIAELSCYEDNVLQSVSRIA
VEILNENDNWPEFVEDTVQTVVINELTPVDTLVFTVLATDADNDQIIYSIDQSSPDAEYF
KINLHNSGEVTLAKALDYENKTQLLLTINAAEMNTAEHFNTSTDIVVDVQDGDDQYPQFL
PCTLLFQDRTNHICTSPVYTVNVTEGKEDFVLDFSPGPIHAVDGDRGLKATVNYAILSGD
DHGRFLMDRQTGEVKFTRAVKDRLVTPALHLQVMAFQDDDPRKYTVATVLVRVLAVNRFH
PVFDMTEYHGFVMAGKSPASLVYTYGNRALMLHVQDQDFKHGFNPMIYFTFSPTSNHTGI
YRVTQEGLLIARANQLKARQKHLLHVMARDRESGDAVVSTVVVDVLSESQSIPLSALIDD
RAISCTLGKALFLSTAFLTVIGCVVTLVLWLKRKHKGHLDPLERGCVAQGKHPNVSLRWF
QLVNPSGGTPRVEDVSFSSEDYGATNPSFSFSGKDPPSCQQPNNGGSDQSTAPLDATLSL
SEANCATITFNSVSTPTGNLSCLSTFRPNSVDINPIEPTENSDSPPPDPSVPCTCLDSQT
STEDPVETPASPSPSSASVPRIQTRITSAEIEKPFSKPHAASSQNPSDSPRLLSPPTPEQ
LPLKATLVMVDASPEQSRWSDEDDQPCTSLDQPEQPQHQEREDQPPNREDDEGFLADEDA
DKNSEDEFEADDDELMRVMSRCNPMFITFTQ
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggccaccactgccaaagtgaagcggaccctcctactgatgctcttcctgcatctacat
gcagtcacagggatgtcgggttggggcggttgcttggacggtcaggatatcttctcgagg
gtggcggaaaacagcctgtgtggggaagtggtggttgacctcatggcggaccccccaatg
gaaggggtcgagtggagactccacgggaaagatgccgattggttctttttggatggaggt
gtcatacgtttgaattcatcaccggagaaagtgcttgaccgagaggtactgggtcctgtg
ctgatagcagaattatcatgctatgaagacaacgtacttcagagcgtttccaggatcgca
gtggagatcctcaatgagaatgacaactggcccgagtttgtagaagacaccgtccaaact
gttgtcataaacgagctgactccggtcgatacgctcgtgtttaccgtcctggcaactgat
gcagacaatgatcagatcatttactccattgaccagtcatctcctgacgcagagtacttc
aaaatcaatcttcacaacagtggtgaggtgacgctcgccaaagctcttgactatgagaac
aaaactcagctcttgctcactatcaatgcagctgaaatgaacacagcagagcacttcaac
actagcaccgacatcgtggtggacgttcaggatggagacgaccagtaccctcagttcctt
ccctgcacgctgttgtttcaggaccgcaccaatcacatttgcaccagtcccgtttacacc
gtcaatgtcacagaaggcaaagaggactttgtactggatttctctcctggtccaatccat
gcggtggatggagacagaggactcaaggcgacggtcaactatgccatcctctcaggagat
gaccatggccgtttcttgatggaccgacagacaggagaagtaaagttcacccgcgcggtg
aaggatagactcgtcacaccagcactgcaccttcaagttatggcctttcaggacgacgac
cccaggaagtacaccgtagccactgtgctggtccgtgttctagcggtgaaccggtttcat
ccagtattcgacatgactgaataccacggctttgtgatggcgggaaagagtcccgcctcc
ctggtttatacctacggcaacagggcgttgatgttacacgtgcaagaccaggactttaaa
cacggatttaatccgatgatctacttcaccttcagccccacgtccaatcacacgggaatc
taccgggtcacacaggagggactcctcattgccagggccaatcagctcaaagccagacaa
aaacaccttctgcacgtaatggcgagagaccgggagtcaggtgatgccgttgtctctacc
gtggtggtggatgtattatctgaaagccaatcaattcctctgagcgctctgatagacgac
cgcgctatcagttgcaccctgggcaaagccttgttcctcagcacggccttcctgacggtg
attggctgcgttgtgaccttggttctgtggctgaagaggaaacataagggccatctggac
cccctggagaggggttgcgtggcccagggcaagcaccccaacgtgagccttcgatggttt
caactggtgaatccgagcggtggcacaccacgggtggaagatgtgagcttcagcagtgaa
gactacggagcaacgaatccttcgttcagcttctcggggaaagaccctccatcctgccaa
cagcccaacaatgggggcagcgaccagtcgacggctcccctcgatgccaccctgagcttg
tctgaagcaaactgtgccaccatcaccttcaacagcgtctccacccccaccgggaacttg
tcttgcttgtccaccttcaggccaaactctgtggacatcaaccccattgagcccacagaa
aactcggattcacctccaccggatccatctgtaccttgcacctgtctcgactcgcaaaca
agtaccgaggaccctgttgagacacccgccagcccctcaccctcgtctgctagtgtccct
cgcatccagacccggatcacctcagcggagatagagaaacctttcagcaagcctcatgcg
gcgtcatcgcaaaacccttcggactcccctcgactgctttcgccgcccacccccgagcag
ctccctttgaaggccacgctggttatggtggacgcgtcacctgaacagtcaagatggagc
gacgaggatgaccagccctgcacgtcgctggaccagccagagcaaccccaacaccaggag
cgggaggatcagccgccgaaccgcgaggacgacgaaggatttctggctgacgaagacgcc
gacaagaacagcgaggacgaatttgaggcggacgacgatgagttaatgagggtcatgtct
cggtgcaatcccatgtttatcacgttcacccagtga
DBGET
integrated database retrieval system
