Syngnathus scovelli (Gulf pipefish): 125971214
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Entry
125971214 CDS
T08785
Symbol
gan
Name
(RefSeq) gigaxonin
KO
K10453
kelch-like protein 16 (gigaxonin)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125971214 (gan)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125971214 (gan)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_FKB95
BACK
Kelch_KLHDC2_KLHL20_DRC7
Kelch_2
BTB
Beta-prop_Calicin
Beta-prop_ATRN-LZTR1
Beta-prop_FBX42
NANM
DUF6242_C
DUF1668
BTB_3
Motif
Other DBs
NCBI-GeneID:
125971214
NCBI-ProteinID:
XP_049580219
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Position
6:14777679..14786765
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AA seq
603 aa
AA seq
DB search
MPDSASSDPGSRVFDPQHSQNLLRVLRTFWQEQSFHDALLVVDGEELPVQKNILAAASPY
IRTKLNYNPPKEDGSVYRIELQGVSMAIMKQILDYIFSGEITLSEGTIQDMVQASDLLLM
TELKLLCCQFLESCITAENCIGIRLFSLHYCLHHVHYAATEYLHTHFRDVALTEEFRELP
HNRLCEVLSEEKLNVGNEKHVLEAVVRWLVHDPDARRVHMKEVMSAVWLQGLDASYLREQ
AMGEPLMREVIREHCQPVLAESQLQGEALLAAFKPRGYSECIVVVGGEDRRTRKPTAVTR
CMCPLYDTNRQTWIELQPMSIARVGHEVVAAEGFLFVVGGTDENNIVLDSGEKYDADSNT
WSPIPPMFQTRQNFGMVELDGLIYILGGENDESELTTVEVFDPHVNTWKMQTSMTMIRKV
GCYATMNKKIYAMGGGSYGKLFDSVECFDPKTQQWTGLCPLMERRFGSVACGVGKELYVF
GGVRSKENDNPEQRHMMTCKSEFYHDEMRRWMLLDDQSLCVQTSSSFVYGAVPIGGSIYV
VGDLDTGTSFDYIREFRRSTGTWHRTKLMLASDLSKTTCAALRIANCRLFRLQLNQGMFR
IRV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccagattcagcgtcaagtgatcctggttcaagggtatttgaccctcaacattcccag
aacctcctcagagttcttcgtaccttctggcaagagcaaagcttccatgatgcactgctg
gtggtagacggtgaggagcttcctgtccagaaaaacatcctggctgcagccagcccttat
atccggaccaaactgaactacaatcctccaaaagaagatggctcagtgtacaggattgag
ctacagggggtctccatggccatcatgaaacagattctggactacatcttcagtggtgaa
atcactttgagcgaagggaccatccaggacatggtgcaagcatctgacctgctcctcatg
actgagctcaagttgctgtgttgccagttcctcgaaagctgcatcacagcagagaactgt
atcggcatccgtcttttctccctccattattgcctgcaccacgtccactacgctgccacc
gagtacttgcacacgcatttccgcgatgtggccctcacagaggagttcagggagttgcct
cacaaccgactctgtgaggtgctgtctgaggagaagcttaacgtcggtaatgagaagcat
gttctggaggccgtggtgcgatggttagtccacgatccagacgctcgcagggtccacatg
aaggaagtgatgtctgccgtgtggttgcaaggcttggatgcaagctacctgagagaacag
gccatgggagagcctctgatgagagaggtgattagagagcactgccagccagttctagca
gagagtcaattgcagggcgaagctcttcttgctgctttcaagcctcgaggttactctgag
tgtattgttgtcgtcggcggagaggatcgaagaaccagaaaacccacagctgtgacccgc
tgcatgtgtccactctatgacaccaaccgacaaacctggattgagctgcagcctatgagc
attgcccgtgtgggtcatgaggtggtcgctgctgagggatttctgtttgtggtgggtggg
acagacgagaacaatatcgtcttggactctggtgagaagtatgacgcagactccaataca
tggagccccatccccccaatgtttcagactcgtcagaacttcggcatggtggagctggat
ggtctaatttatattctgggtggggagaatgacgaaagtgaactgactactgtggaagtg
tttgaccctcacgtcaatacctggaagatgcagaccagtatgactatgatccgcaaggtg
ggttgctatgccactatgaacaagaagatctatgccatgggtggcggttcctatgggaaa
cttttcgactcagttgaatgctttgaccccaaaacccagcagtggacgggactctgtccg
ctcatggaaagaaggtttggatctgtggcctgtggcgtcggtaaggaactctacgttttt
ggtggagtgagaagtaaagagaacgacaacccagagcaacgtcatatgatgacctgcaag
tctgaattctaccatgatgaaatgaggaggtggatgcttctagatgaccaaagcctatgt
gtccagacgagctcatcattcgtctatggtgcagttcccatcggaggcagcatctatgtc
gttggagacttggacaccggtaccagcttcgactacatccgcgagtttcgccgcagcacg
ggaacctggcatcgtaccaagctcatgctagccagcgacctctccaaaacaacctgtgcc
gcacttcggatcgccaactgccgtctgttccgccttcagttgaaccaaggcatgtttcga
atcagagtctga
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