Syngnathus scovelli (Gulf pipefish): 125971286
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Entry
125971286 CDS
T08785
Symbol
itpr2
Name
(RefSeq) inositol 1,4,5-trisphosphate-gated calcium channel ITPR2
KO
K04959
inositol 1,4,5-triphosphate receptor type 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04070
Phosphatidylinositol signaling system
sscv04114
Oocyte meiosis
sscv04210
Apoptosis
sscv04218
Cellular senescence
sscv04270
Vascular smooth muscle contraction
sscv04371
Apelin signaling pathway
sscv04540
Gap junction
sscv04621
NOD-like receptor signaling pathway
sscv04625
C-type lectin receptor signaling pathway
sscv04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125971286 (itpr2)
04020 Calcium signaling pathway
125971286 (itpr2)
04070 Phosphatidylinositol signaling system
125971286 (itpr2)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
125971286 (itpr2)
04210 Apoptosis
125971286 (itpr2)
04218 Cellular senescence
125971286 (itpr2)
09144 Cellular community - eukaryotes
04540 Gap junction
125971286 (itpr2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125971286 (itpr2)
04625 C-type lectin receptor signaling pathway
125971286 (itpr2)
09152 Endocrine system
04912 GnRH signaling pathway
125971286 (itpr2)
09153 Circulatory system
04270 Vascular smooth muscle contraction
125971286 (itpr2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125971286 (itpr2)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
IP3 receptor
125971286 (itpr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
Sec2p
Motif
Other DBs
NCBI-GeneID:
125971286
NCBI-ProteinID:
XP_049580334
LinkDB
All DBs
Position
6:complement(13223702..13268865)
Genome browser
AA seq
2687 aa
AA seq
DB search
MSDNRSSFLHIGDIVSLYAEGSVNGFISTLGLVDDRCVVQPDEGDLADPPKKFRDCLFRV
CPMNRYSAQKQFWKAKQGKQGNNTQADLFKKLQHASELEQKQNESENKKLLGEVVKYSNV
VQLLHIKSNKYLTVNKRLPALLEKNAMRVSLDPAGNEGSWFYIQPFWKLRSEGDNVVLGD
KVVLMPVNAGQPLHASNIELLDNPGCKEVNAVSCSTSWKVTLFMKFSDYKEDILKGGDVV
RLFHAEQEKFLTCDDYKKKQHVFLRTTLRQSATSATSSKALWEVEVVNYDPCRGGAGHWN
SFFRFKHLATGNYLAAEENPEFKVESLEPKGENETDSVYCKRNHQAADRIAFTLVSVRQG
HDIASIFELDATTLQRADCLVPRNSYVRLRHLCTNTWVTSTNVPIDAEEERPVMLKIGTC
STKEDKEAFAIVSVPFSEVRDLDYANDASKVLEATVRKLQYGNIAQNERRFLTKLLEDLV
FFVCVVPNNGQEVLSVVTSTPNRERQKLMREQNILAQIFGILKAPFTDQGDGPMLKLEDL
GDQRYCHFKYMLRLCYRVLRHSQQDYRKNQEYIAKKFSIMQSQIGYEILAEDTITALLHN
NRKLLEKHITAKEIETFVSLLRRNREPRFLDYLSDLCVSNKTAIPVTQELICKFVLNPTN
ADILIQTRLIQNTETTLESSLTVEDGEEEEVWLYWIDSHKEPHGKSIRHLAQDAKGNHKM
DVDIVTYYRYQLNLFAKMCLDRQYLAINQISSQLPVDLILRCMFDDCLPYNLRASFCRLM
LHMHVDRDPQEAVVPVRYARLWTEIPSKITIHEFEYESADTSREEMKRKFAPTMEFVDEY
LKDVVSQPYPFGEKDKNELTLEVVNLARNLVYFGFYSFSELLRLTRTLLAILDIVQHPLT
FMNKLTKSPEAGNNVLRTIHGVGEMMTQMVMSRGVPQGLPDTPPSLRYGKGHMLLDTEDV
MVMDTKLKIIEILQFILSVRLDYRITYLLSIYKKEFGEKSVLENTVLQTDVLLIATSPEP
DIDEIATKAESMFAGSSDLSAVELDDEGGRTFLRVLIHLMMQDYPPLVSGSLQLLFKHFS
QQAEVLQAFKQVQLLVSEHDVENYKQIKADLDQLRLTVEKSELWVEKNGVYNSEDLGDRP
GKEQLIEETGLSIVLDGNHKPQIDSNKQNNYNIVKEILLRLSKLCYHGKKIRMQQQRLLK
NMGAHTVVLDLLQIPFEKNDEKMNEIMTLAHTFLQNFCRGNHQNQFLLHKHLNLFLTPGL
LEAETMRHIFMDYYQLCNEISDRVVNHFVHCIETHGRHVLYLKFLQTIVKAEGKYVKKCQ
DKVMTELVNGGEDVLVFYNDRSSFLVLLQMMASERERIDEDGALAYHNTLVELLAACTEG
KNVYTELKCNSLLPLDDIVKVVTDVNCIPEVKTAYVNFVNHCYVDTEVEMKEIYTSNHIW
KLFDNILVDMSRVCNTTTDRTHADLALEKYVTETVMAIITGFFSSPFSVNHSNLQTNQSI
FVKLLESAFRLYSCTWVTQKANIENCIRTLADVAKARAIAIPVDLDSQVNTLSLKVHSNM
VQRAAKDWRTSARARPRKENLGGPDYKTIIEKLQGVVSHLEEQFSPMVQAEFSVLVDVLH
SPELLFPEAARLRCESGAFMSKLIKHTKKLMDKEEKLCIKILKTLREMLDKKDWVQESGK
ELRETLLTRYFGNQRCASKTEIGIGNSSPPCFPKPTFAGGSLTADFDKPCSSIMDIQCQL
DIVGATELVIDLIVNTKNDQVFEESVLLGNALLQGGNTQIQDSFYSQLYKQKKSERFFKV
FYDRMRLAQQEIRATVSVNMFELNCRKRDDDADFGGVGFRKGKDSGLHMREDMRGQLKEA
SSVTSKAFAAFRKELDPDLEALCNNSGVTGAEEVLEETRMSQAITIMKPILRFLQLLCEN
HNSDLQNFLRSQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINESNVDLVRQTLET
ITEYCQGPCHENQTCIARHESNGIDIIIALIVNHINPLGKNRLDLVLELKNNASKLLLAI
MESRHDSENAEKILFKMRPTELVDAMKEAFAQALESEEDEDSALYHVKPLDVGHNIYILA
HQLARHSKILQQSLKPGSSLVNGTSSDHDNDEKDDALQYYANHTAQIEIVRRDRTMEQIV
FPVPNICEYLTQESKMRVFTTTERDDQGSKVNDFFQQFDDLYNEMSWQKKIRKNKTLFWF
SRHISHWGSISFYLACLLNICVAVFYPFGDDGDEGILSIFNCVMLWAALAASIALLPVLP
KPWGILFFLVVLILRAIYTMGLGPALLLLGTINLFNKLIFLVSFVGNQGTFIRGYKAVVM
DMLFIYHLGYALICVLGLFVHEFFYSFLLFDLIIREETLLNVIKSVTRNGRSIILTAVLA
IFLVYFFSIIGFLFLKDDFRMEVDRLPASGYGHSFGKQALEDSCPKDKCYGSIKTAPDED
DGTERVCDTLLMCIITVLNQGLRNGGGVGDILRRPSKEEPLFAARVVYDLLFFFVVIIIV
LNLIFGVIIDTFADLRSEKQRKEEILKTTCFICGLERDKFDNKTVSFEEHILSEHNMWHY
LYFLVLVRVKDPTEYTGPESYVAEMIAEKNLEWFPRMRAISLVSNEGDNEQNEMRLLQEK
LESTVTLVAQLSAQLSELKEQMTEQRKHKQRQGLLAPPQTNHHVSNH
NT seq
8064 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacagatccagtttccttcacattggagacatcgtgtctctctacgcggaa
ggctcggtcaacggcttcataagtactttgggtcttgtcgatgacaggtgtgtagtccag
cccgatgaaggagacttggcagaccctcccaaaaagttcagagattgcctcttcagggtg
tgtcccatgaacaggtactctgcccagaagcaattttggaaggcaaaacaagggaaacaa
gggaacaacacacaagcagacttattcaagaaattacagcatgcatcagagcttgagcag
aagcagaatgaatctgaaaacaagaagctccttggagaagttgtcaagtacagtaatgtt
gtccagctcctgcacatcaagagtaacaagtacttgacggtaaacaagcgtctccctgcc
ttgctggaaaaaaatgccatgcgagtttctctggacccggctgggaacgagggctcctgg
ttctacattcagcctttctggaagctgcgcagcgaaggagacaatgtggtgcttggagac
aaggtggtgctgatgccagtgaatgcggggcagcctcttcatgccagtaatatcgaactg
ctagacaaccctggctgcaaagaggttaatgcggtcagctgcagcacaagctggaaggtc
acattattcatgaagtttagtgactacaaggaagacatcctgaaagggggagatgtggtt
aggctcttccacgcggagcaggagaagtttctgacctgtgacgactacaagaaaaaacag
catgtcttcctgcgtaccacattgcgacagtctgccacctctgccaccagctccaaagct
ctctgggaagtggaggttgtaaactatgacccctgcagaggtggggctggtcattggaac
agtttctttcgattcaagcacctcgctactggcaattacctcgcagcggaggaaaaccct
gaattcaaagtcgaatcattggagcctaaaggagagaatgagacagactctgtgtattgc
aagagaaaccatcaagctgcagacagaattgcctttacactggtttctgtcagacaaggc
catgacatcgcttccatctttgagctggatgccaccacgctgcagcgggcagactgcctg
gtacccagaaactcttatgtgaggttgaggcacctgtgcactaacacatgggtgaccagc
accaacgtgcccattgatgcagaagaggagcgtccagtcatgctcaagattggcacctgt
tccactaaagaggataaggaagcttttgcgattgtatccgttcccttttcggaagtcaga
gacttggattacgccaacgatgccagcaaagtactcgaggccactgtgaggaagcttcaa
tatggaaacattgctcagaatgagagaaggtttttgacgaagctgctggaagacctggtt
ttctttgtatgtgtggttccaaacaatggccaggaggttctgtccgtggtcacttccaca
cctaaccgtgagaggcagaaattgatgagagaacagaacatcctcgctcagatctttggt
atcctcaaggctccattcacagaccagggtgatggccccatgttgaaattagaggatttg
ggagaccagcgctattgccactttaagtatatgctgagactctgctacagagtgctgcga
cactctcagcaggactatcgcaaaaaccaggagtatatagcaaaaaagttctcaatcatg
cagtctcaaattggatatgagattctggctgaagataccatcactgctctgctgcacaac
aaccgcaagctcttggaaaaacacatcacagccaaagagattgaaacatttgtcagcctt
ctaagacggaatagagaacccagattcctggattatctctccgatctgtgtgtgtccaat
aaaacggccattcctgtcacacaggagctgatttgcaaatttgtgctcaaccccaccaat
gcagatatccttatccagacaagactaatccaaaataccgagaccaccctggagtcctct
ttgacggtggaggatggagaagaggaggaggtttggctctactggatcgacagccacaag
gagcctcacggcaaatctatccgccatctggctcaggatgccaaaggcaaccataagatg
gatgtagatatcgtcacttactacaggtatcagctgaacctgtttgctaaaatgtgcctg
gaccgtcagtaccttgccatcaatcagatctcctctcaacttcctgtggatctcatcttg
cgctgcatgtttgatgactgcctgccctacaacctgcgagcatccttctgccgcctcatg
ctacatatgcatgtggaccgtgacccacaagaagctgtggttcccgtgcgctatgcacgt
ctctggactgagatcccatccaagatcaccattcatgagtttgaatacgagtcggcggat
acctcgagagaggagatgaagaggaagtttgcacccaccatggagtttgttgatgaatac
cttaaagacgtggtcagccaaccttatccatttggggaaaaagacaagaatgaacttact
ctagaggtggtgaatctggctcgtaacctggtttactttggtttctatagctttagtgaa
ctcttgcgactcacccgcactctactggccatactggatattgttcaacacccgctcact
ttcatgaacaagctcaccaaaagtccggaggctggtaacaatgtcctgcgtacgatccac
ggtgttggagaaatgatgacccagatggtgatgagtcgaggtgtgccacaagggctgcct
gacacgcctccttcactgcgctacggcaaaggacacatgcttctggacactgaggacgtc
atggtgatggacactaagctaaagatcatagagatcctgcaattcatcctgagtgtgcgg
ctggattacaggatcacatatttgctgtccatctacaagaaagagtttggagagaagagc
gtattagagaacactgttttacaaactgatgtgctcctcatcgcgacgtctcctgagcct
gacattgatgagattgcgactaaagcagagagcatgtttgctggaagttctgacttaagt
gcagtggagcttgatgatgaaggtggccgaacgttcctgagggttctgatccatctcatg
atgcaagactatcctccgttggtatctggttcactgcagctcctcttcaaacacttcagt
cagcaagctgaagtgctgcaggccttcaaacaggtccagctcttagtttcagagcatgac
gtagagaactacaagcaaattaaggctgaccttgaccaactgcgtctaactgttgagaaa
tcagaactgtgggtggagaagaacggagtctacaacagtgaagaccttggtgacagaccg
ggcaaagaacaactcatagaggagactggactgagcattgtccttgatgggaaccataaa
cctcaaatagacagcaacaagcaaaacaactacaacattgtcaaagagatcttgctacgt
ctcagtaagctgtgttaccatggtaaaaagatccgtatgcagcagcagaggcttctgaaa
aacatgggggctcatactgtcgtgctggacctgcttcaaatcccatttgaaaaaaatgat
gagaagatgaatgaaatcatgaccctggcacatacatttctgcagaacttctgcagaggg
aatcatcagaaccaatttctgcttcataaacacctcaatctcttccttactccagggcta
ctcgaagctgaaacaatgcgtcacatctttatggattactaccagctgtgcaatgaaatc
agcgaccgcgtagttaatcactttgttcactgcattgaaacgcacgggcgccacgttctg
tacttgaagttcctacaaaccattgtgaaagctgaaggaaaatatgtgaagaaatgtcag
gacaaagttatgactgagcttgtgaacgggggcgaggatgtcctggtgttctacaatgac
cgctcctcgtttctagtcttgctccagatgatggcctccgagcgtgagcgcatcgatgaa
gatggcgctctggcttaccataacacgcttgtggagctgcttgctgcctgcactgagggc
aagaatgtctacactgagctgaaatgtaactctttgctaccactggatgacattgtcaaa
gttgtgacagatgtcaattgcatcccagaggtgaaaactgcatatgtgaactttgtcaat
cactgttatgtagacacagaagtagaaatgaaagaaatctatacctccaatcatatctgg
aagctgtttgacaatatcctggttgatatgtccagagtatgtaacactaccacagaccgg
acccatgccgatttggcccttgagaagtatgtgacggagacagtgatggccatcatcact
gggttttttagttcgccattttctgtcaaccactccaaccttcagacgaaccaatccatc
tttgtcaagctactcgagtcagcttttaggctctacagctgcacgtgggtcacacagaag
gcaaatattgagaactgcatcagaacactagctgacgttgccaaggcacgggcaatagca
atcccagttgacctggatagtcaagtcaacacgctgtctctaaaggtccacagtaacatg
gttcagcgggcagcaaaggactggagaacctctgctcgtgcgcggccccgcaaggagaac
ctggggggtcctgactacaagaccatcattgaaaaattgcagggtgttgtgtcccatctg
gaggagcagtttagtccgatggttcaggccgagttttctgtactggtggatgtcctccac
agtcccgagctgctgttcccagaagccgctcgcctacgttgtgagagtggagctttcatg
tcaaagcttatcaaacacaccaagaagcttatggacaaagaggaaaagctttgcatcaag
atcctgaagacactccgagaaatgctggacaagaaggactgggttcaggagtctggaaag
gagttgagagagactctcctcactcgctactttggaaatcaaaggtgcgcttctaagacc
gagattgggattggaaacagctcacctccttgttttcccaagccaacatttgcaggaggt
tctctcacagccgactttgacaagccatgcagtagtatcatggatatccagtgtcagctc
gacattgttggagcgactgagctggtgattgacctcattgtcaacactaagaatgaccaa
gtgtttgaggagagtgtcttgttgggcaatgcccttctgcaaggtggaaatacacagata
caggactccttctacagtcaactttacaagcagaagaagtcggagaggttctttaaggtt
ttctacgaccgcatgcgtttggctcagcaggagatccgtgccactgtgtccgtcaacatg
tttgagctcaactgcagaaaaagggatgatgacgctgactttggtggtgtcggattcaga
aaagggaaagactcaggacttcatatgagggaggacatgcgagggcaacttaaagaggct
tcgtctgtgacctctaaggctttcgctgctttccgaaaagagctggatcctgatcttgaa
gccttatgcaacaacagtggagtgacaggggctgaagaggtcttagaagagactcgcatg
agccaagccatcaccattatgaaacccatcttacgcttccttcaacttctctgtgagaac
cacaattctgatctgcagaactttttgcgctcacagaataacaagaccaactacaatcta
gtatgtgagacacttcagttcctggactgtatttgcgggagcaccacaggaggcctcgga
ctacttggcctttatataaatgagagcaatgttgatctggttcgtcaaaccttggaaacc
atcacagagtactgccagggcccctgccatgaaaaccagacatgcattgccagacatgag
tcaaatggtattgacatcattattgcgctgattgtcaaccacatcaaccccttggggaag
aaccgcctggacctggtgctggagctcaagaataatgcttccaagctcctgctggctatc
atggaaagccgccacgacagcgagaacgcagaaaaaatcctcttcaagatgagacctaca
gagcttgtggatgccatgaaagaagctttcgcccaagctctggaaagtgaggaggatgag
gacagtgctctataccatgtcaagccattggatgttgggcataacatttacatactagcc
caccagctggctcgacacagtaagatcctgcagcagagtctgaaaccaggctcaagtttg
gtaaatggaacaagctcagaccatgacaatgatgaaaaggacgatgcccttcagtactat
gccaatcacacagctcagattgagattgtgcggcgtgaccgcaccatggagcagattgtt
tttccagtccccaacatctgtgagtacctgacccaagagtcgaaaatgcgcgtgttcacc
accactgaacgggatgaccagggcagcaaggttaacgacttctttcagcagtttgacgat
ctctacaatgagatgagttggcagaagaaaatccgaaaaaataagactttgttttggttc
tcacgccatatctctcattgggggagtatttccttctacctggcctgcctgctcaacatc
tgtgtggctgtattttacccatttggagatgatggagatgaagggatcttatcaatcttc
aactgtgtaatgctgtgggctgcattggcagcttccattgctttacttccagtgttaccc
aaaccgtggggcatccttttcttcctggtcgtcctcattttacgtgcaatttataccatg
ggcctgggtcctgctttgttactacttggtaccatcaatttgttcaacaagttgatattt
ttagtgagttttgtgggaaaccaggggacgttcatccgtggttacaaagctgtcgttatg
gacatgcttttcatctaccacctgggctatgcactcatctgtgttctgggtctctttgtg
cacgagttcttttacagctttctgctctttgacttgataatcagagaggaaacgctgctt
aatgtcataaagagtgtgacgaggaatggtcgctccattatcctgaccgcagttctggcc
atttttcttgtctacttcttctccattatcggcttcctcttcctcaaagatgacttccgc
atggaggtggaccgtctccctgcatcaggatatggacattcatttggtaaacaagcgttg
gaagattcatgcccaaaggacaaatgttatggttctattaaaactgctcctgatgaggac
gatggaacagagagggtgtgcgacactctgcttatgtgcataatcactgtgttgaaccaa
ggactacgtaatggtggtggtgttggcgatatcttgagaagaccctccaaagaggaaccg
ctgtttgcggcccgcgtggtttacgacctgctgttcttctttgttgtaatcatcatcgtt
ctcaacctcatctttggcgtaatcatcgacacctttgccgatttaaggagtgagaaacaa
aggaaggaagagatcctgaaaacgacttgtttcatctgtggattggaaagagacaaattt
gacaacaagacggtgtccttcgaagagcacatcttgtctgagcacaacatgtggcattac
ctttacttcttggttctggtgagagtgaaggatcccaccgaatacaccggcccagaaagc
tatgtcgccgagatgatagcggaaaagaacttggagtggttcccccgaatgagagccatt
tctctggtgagcaacgagggggataacgagcagaatgagatgcgattgctgcaggagaaa
ctggagagcaccgtcacgctggtagctcagctgtccgcccagctgtctgagctcaaggag
cagatgactgaacagaggaagcacaagcagaggcaagggttattggctcctccgcagaca
aaccatcacgtctcgaatcattga
DBGET
integrated database retrieval system
