Syngnathus scovelli (Gulf pipefish): 125971309
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Entry
125971309 CDS
T08785
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
sscv04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125971309 (pparab)
03320 PPAR signaling pathway
125971309 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125971309 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125971309 (pparab)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125971309 (pparab)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
125971309 (pparab)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125971309
NCBI-ProteinID:
XP_049580384
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Position
6:16023383..16067483
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AA seq
473 aa
AA seq
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MVDVESHYRPPSPLEDSMLGNSPLYADDDFIGGMEELQDISQSMDRSTLSSYDAPEYQSS
SNGSEGSTVFDALTPASSPSSSVAYGLAASQEDFSPSSSSSSLSLECRVCADRASGYHYG
VHACEGCKGFFRRTIRLKLDYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGR
MPQSEKLKLKAEMVTGDREVEDPQMADQKTLARQIYEAYLKNFNMNKAKARTILTGKTST
PPLVIHDMDTLQLAEQTLVAKMVGSAGVLKDREAEVRLFHCCQCTSVETVTELTEFAKSV
PGFSDLDLNDQVTLLKYGVYEALFAMLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDM
MEPKFQFATKFNALELDDSDLALFVATIICCGDRPGLVNVSHIERMQESIVQVLQLHLLV
NHPDDLFLFPKLLQKLADLRQLVTEHAHLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgttgagagtcactaccgaccgccttcgcccctggaggactccatgctgggc
aacagcccgctgtacgccgatgacgacttcatcggcggcatggaggagctccaggacatc
tcgcagtccatggatagaagtaccctcagctcttatgatgcccccgagtaccaatcgtcc
agcaacggctcggaaggctccactgtctttgatgccctgacgccggcgtccagcccgtcg
tcttcggtggcttacgggttggcggcgagccaagaggacttctcgccttcgtcctcctcg
tcctcgcttagcctggagtgtcgagtgtgtgccgaccgggcctcgggctaccactacggc
gtccacgcctgcgagggctgcaagggtttttttcggcggaccatccgtctcaagctggac
tacgacaaatgcgaacgccgctgcaagatccaaaagaagaaccgcaacaagtgccaatac
tgccgcttccagaagtgcctgtcggtgggcatgtcccacaacgccattcgttttggacgg
atgccacagtcggagaagctgaagctgaaagctgagatggtgacgggggaccgcgaggtg
gaggacccccagatggccgaccagaaaacactagctcggcagatttacgaggcctatctc
aagaacttcaacatgaacaaggccaaagctcggaccatcctcacggggaagaccagcacc
ccgcctttggtcatccatgacatggacacactacagctggcggagcagaccctggtggcc
aagatggtgggctccgcgggggtcctgaaggaccgggaggccgaagtgcgcctcttccac
tgctgccagtgcacctcggtggaaacggtcaccgagttgacggaattcgccaagtcggtc
cccggtttctccgacctggacctcaacgaccaggtgactctgttgaagtacggcgtctac
gaggccctcttcgccatgctggcctcgtgcatgaacaaagacgggctgctggtggcgtac
ggctcgggcttcatcacgcgcgaattcctcaagagcctgcggcggcctttcagcgacatg
atggaacctaagttccagtttgccaccaagtttaacgccctggagttggatgatagcgac
ctggcgctctttgtggccaccatcatctgttgtggagaccggccgggcctggtgaacgtg
agccacattgagcggatgcaggagagcatcgtgcaagtgctacagctccacctgctggtc
aaccacccagacgacttgttcctcttccccaagcttctgcagaaactggccgacttgcgg
cagctggtcaccgaacacgctcatctggtgcaggagatcaagaagacagaggacacgtcg
ttacacccgctcctgcaagagatctacagagacatgtattga
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