Syngnathus scovelli (Gulf pipefish): 125971773
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Entry
125971773 CDS
T08785
Symbol
pax3b
Name
(RefSeq) paired box protein Pax-3b isoform X1
KO
K09381
paired box protein 3/7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125971773 (pax3b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125971773 (pax3b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
125971773
NCBI-ProteinID:
XP_049580696
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All DBs
Position
7:7800177..7823612
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AA seq
491 aa
AA seq
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MTALAGSIPRMMRPTLAQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQATTPDVEKRIEE
CKRENPGMFSWEIRDKLLKDGICHRNNVPPVSSISRVMRNKCGGKDDEEEDEDDMEKSEL
EESDRRGKHSIEGILGDRSSHSDEGSEVESEPDLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMSFNHLIPGGFPPSAM
SSLTPYQLSDSAYPSASIAQEPPSTLHRPQPLPPSSGHQVSSGGGQGEGSSAYCLASGRH
SFSGYSESFVSPANPMNPAIGNGLSSQVMGLLNHGGVPHQPQSDYAISPLTGGLEPAASM
AASCSQRMDHIKGLEGLTSVPSMSALPSLPSSQSYCPPSYSSQGYTVDHMASYQYGQYGQ
SPLPYLRPEIA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgctggctgggtctattcccaggatgatgcgacccacgctggcacagaactac
cctcgcagtggcttccctctcgaagtgtcaactccgctgggtcaaggccgagtaaaccag
ctcggtggagttttcataaatggcaggcctttgcccaaccacattcgacataagatcgtg
gaaatggcccaccacggcatcagaccgtgtgtcatctcccggcagctgcgggtctcccac
ggctgcgtatctaaaatcctgtgcagataccaggagaccggctccatcagacccggggcc
attggaggcagcaaaccaaagcaggcaacgacgcccgatgtggagaagagaatagaagaa
tgcaagcgagaaaacccgggtatgtttagctgggagattcgggataaattactgaaggat
ggcatatgtcaccgcaacaatgtccctccagtcagttccatcagtcgcgttatgcgcaac
aagtgtggagggaaagacgatgaagaggaagatgaggatgacatggagaagagtgaactg
gaagaaagtgaccgaaggggcaagcacagcattgaaggcatcttaggagacagatcgagt
cactcagatgagggttcggaggtggagtcagagcctgatctgccactaaaacggaaacag
cggcgcagtaggaccacctttacggctgagcagctggaggagttggagagggcctttgag
aggacccactaccctgacatctacaccagggaggagcttgcccaaagggcaaaactgact
gaggccagggtgcaagtatggttcagcaaccgaagggccaggtggcgaaagcaagcaggg
gccaaccagctgatgtcctttaatcacctgatcccaggaggtttcccaccttcagccatg
tccagccttactccttaccagctctctgacagtgcctatccctcagcatccatagcacaa
gagccgcccagcacgctacaccgaccacagcctctcccgccgtcgtcgggtcaccaagtg
tctagtggcggaggacaaggtgaaggaagctcagcctactgccttgcctctggacgccac
tctttctcaggatactcggaaagctttgtgagcccggccaatcccatgaacccggccatt
ggaaatggactctcctcacaggtgatgggtctgctgaatcacggtggggttccacatcag
ccgcaaagtgactatgccatctcacctctaactggcggtcttgaaccggctgccagcatg
gccgccagttgcagccaacgcatggatcacatcaaaggtctggagggtctgaccagtgtt
ccctcaatgtcagctctgccctccctacccagctcgcagtcctactgccccccctcctac
agctcccagggctacacagtcgatcacatggcgtcctaccagtatggccagtacggacaa
agtccccttccttatctgaggcctgagattgcctga
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