Syngnathus scovelli (Gulf pipefish): 125971783
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Entry
125971783 CDS
T08785
Symbol
plch1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X1
KO
K19006
phosphatidylinositol phospholipase C, eta [EC:
3.1.4.11
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00562
Inositol phosphate metabolism
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
125971783 (plch1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125971783 (plch1)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
125971783 (plch1)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
125971783 (plch1)
Endocytosis
Macropinocytosis
Phospholipase C
125971783 (plch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
C2
EF-hand_like
EF-hand_7
PH_12
EF-hand_1
EF-hand_6
EF-hand_10
AIF-1
PH
EF-hand_5
EH
Motif
Other DBs
NCBI-GeneID:
125971783
NCBI-ProteinID:
XP_049580721
LinkDB
All DBs
Position
7:complement(2271445..2299875)
Genome browser
AA seq
1866 aa
AA seq
DB search
MEEIYFSLFGPSAYKGAASLIAGSVEKSAVLTVATLLARNVENVGGNLAAPPKCRLTLIV
ERCMSVMQSGTQMVKLKAASKGLVRLFYLDEHRSCIRWKPSRKSEKAKITIDSLYKVTEG
VQSDIFHRHPEGSLDPACCFTVYHGNHMESLDLVTSNSDEARTWVTGLRYLMAGISDEDS
LAKRQRTHDQWMKQTFEEADKNGDGLLNIDEIYQLLHKLNVNLPRRKVKQMFQEADTDDQ
QGTLTYDEFAVFYRMMSMRRDLFLLMMAYSDRKDHLTADELANMLRSEQKMVNVTPEYVA
EIIDKFEISDENKQNSVMGIEGFTSFMRSPTCDIFNPLHNEVNQDMDQPLCNYFIASSHN
TYLTGDQLLSHSKTDMYAWVLQSGCRCVEVDCWDGPDGEPMVQHGYTLTSKITFKSVIET
INKYAFVNNQYPVLLSIENHCSIQQQKKIAQYLREVFGDKLDVGHVLTRESKMLPSPQSL
QGKILIKGKRLPAYLSADAEEGEVSDDDSADEIEDDFKLKNSNGNGQHHQVESHIRKKLD
SLLKESRIGDKEDTDSFSIRALLRATHQGLQKNLRQSSRGVLKKSQSRSFITTLKQKRHS
KSRLTCQSGEKEEDEQETSTRDNGGQFNRGGRKRKTMKLSRDLSNLVVFTNSVASQECLN
EGTPGDVLSFSETRAQSLVNHRAEHFLAFNQRQLSRIYPSAYRIDSSNFNPQFYWNVGCQ
LVALNYQTEGRMMQLNRAKFMVNGGSGYVLKPPPMCKGTFNPFSDDPLPACPKKQLVLKV
ISGQHLPKPPDSMLGDRGEIIDPFVEVEIIGLPIDCCKEQTRVVDDNGFNPVWEETLSFT
LHMAEVALVRFLVWDHDPIGRDFIGQRTVAFSSLMPGYRHVYLEGLTEASIFVHVSVHDV
YGKWSPLVLNPSFTIMHFLGSSKGNQLRGIRGLFHRSSKSSVDTTSAGLRKRSISDHLLR
RTASAPAKGRKKTKMSLSESTACMSEHKNGVEAIGEEPGPEKKPQARPLLTHRPISMPLD
RLLQGQLTLCSSDKEHDGANAVVGTYSFDRARSSSVDLLMKSSTSIQETIQSPSKMRNKN
PNKPQEASYLVVGDDNIRNEDDYVNYQASNNRVNQSKIHSALSTNKQCRSDKLETSSIST
AFTVAPSVSSSSAPSSVTPLPSINMDHDLKSSSSLHDSTISRLIDAMSLGNEQDSRGSIS
ALIGQFESTENENQRTSQICTPRTTLSPSTIHLADSTGPALFSSPETAELEEVYTILDEE
MLSSPPLSAYNQKNQSVHDQANTLNGLSSSSLASSPVKGAQGLGSQRNKCWDERNGDSEE
VEESVYEEVFDPPAPITEQQRSSTQRYVRPPLNNSFQLSHDRVSNAFGEVEVNVDEDPKE
VSVTSSRRVWESLGSPSKQSAIYQNESTPKYSQQRLPLPFCEPQQYPTFSTPCPSSYSKP
LYQRPNQQSGVQFSPMRRPVDSKFSKPRPLSHNGYPSPQSNPFHYSREFTQQRSFNNSPV
PNGFLQGSQIPNSFHKGRQGYQVREQERCLQNGFSSSENLHSVPSGNSFSDRGLYSMPSD
FDTVYSHTDSGDLSESAPPSVSQLSEIQASTPKLSCNQKVTVSQVHSDTKAPKISTPRSL
STRPQSISVDSTVSTPCKSKSLGDLTSEDISCNFQSKYHIISRSFITPHMRRQKRMGTMG
GGTFQSQSCDPLTEQLRKLVNLEIEVSERDMRQSPRRDEEPSRTTSTDPSTSRDIDDSPP
PLTRRLSSRSQSRVRHINSRARERQQEALKPRSSGVVNGTAAVGGVVLRNKPASQNSPVN
RHSTGSYIAGYLGQLEDRGLPEGACTASRYGNGDQHSDRYCTDDSLPPSDSSHFSSEPEV
YFLLRL
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatctatttttcactctttggtcccagcgcatacaaaggagcagcttcttta
attgccggctctgtggagaaatcggcggtgttaaccgttgcgactttgctggcgcgtaat
gtcgagaatgttggaggcaacctggctgcacccccaaaatgcagattaacgctcatagtg
gagcgatgcatgagtgtgatgcagtccgggacacagatggtgaagctgaaggcggcatcc
aaagggctggtcaggctcttttacctggatgagcatcgctcctgcatccgctggaagcca
tcacgcaagagcgagaaagccaaaatcaccatcgactctctgtacaaagtgacagagggc
gttcagtcggacatctttcaccggcatcccgagggcagcttggacccggcgtgctgcttc
accgtctaccatggcaaccacatggagtcactggacctggtcacgtccaactcggacgaa
gctcggacttgggtgacgggcctccgttacctgatggccggcatcagtgacgaggactct
ctcgccaaacggcagcgcacccacgaccagtggatgaagcagacgtttgaggaagccgat
aagaacggtgacggcctgctgaacatagacgagatctaccaactcctccacaagctcaac
gtcaatctcccgaggaggaaagtcaagcaaatgttccaggaagcagacacagacgatcag
cagggtacgcttacgtacgacgagtttgccgttttctacaggatgatgtccatgcgacgg
gacctcttcctgctcatgatggcctacagcgacaggaaggaccacctgacggccgacgag
ctggccaacatgttacgctctgagcagaagatggtaaacgtgactccggagtacgtggca
gaaattattgacaagtttgaaatatcagatgagaacaaacaaaacagtgtcatggggatt
gaaggtttcacgagcttcatgcgcagtccgacgtgcgacattttcaacccgcttcacaac
gaggtgaaccaggacatggaccagcctctgtgcaactatttcatcgcctcctctcacaac
acgtatctaaccggggaccagttgctgtcgcattccaagaccgacatgtacgcctgggtt
ctccaatccggctgtcgctgcgtggaagtggactgttgggacggtccagatggtgagccg
atggtccagcacggctacacgctgacttccaagatcaccttcaagtccgtcatcgagacc
atcaacaaatacgccttcgtcaataaccagtacccggtgcttttgtccattgagaaccac
tgcagcatccagcagcagaagaagatcgctcagtatttgagggaagtgtttggtgacaag
ctggacgtcgggcatgtgctcactagagagtccaagatgttacctagccctcagagtctg
cagggaaagattcttattaaaggcaagcgcctgcccgcatatctgtccgccgatgccgag
gaaggcgaggtgtccgacgacgacagcgccgacgaaattgaggatgacttcaagctaaag
aacagcaacgggaacggtcagcatcatcaagtggagtctcacatcaggaagaagctggac
tccctcctgaaggagtctcgtatcggcgacaaggaagacaccgacagcttcagtatccga
gctctgctgagggccacgcaccagggccttcagaagaacctccgtcagagctccaggggg
gttctgaaaaaatctcaaagccgatccttcatcaccacactcaaacagaagaggcactcc
aaatcacggctgacgtgtcaaagtggggagaaggaggaggacgagcaggagacgtccaca
agggacaatggaggacagtttaacaggggaggacggaagaggaagaccatgaagctgagt
cgggatctatcaaacttggtggtgttcaccaactccgtggcctcgcaagagtgtctcaac
gaaggtacgccgggtgacgtcctgtcattcagcgagaccagagcccaatcgctggtcaat
caccgagccgagcacttcctggctttcaatcagaggcagctgtcgcggatctatccctcg
gcttaccgcatcgactcgtccaatttcaatccccagttctactggaacgtcggctgtcaa
ctggtggcgctcaactaccagacggaaggccgaatgatgcagctcaacagggcaaagttc
atggtcaacggaggtagcggctacgtcctgaagccgccgcccatgtgcaaaggcactttc
aacccatttagcgatgacccacttccggcatgccccaagaagcagctcgttcttaaggtc
attagcggacagcatttgcccaaaccgccggattccatgctaggggaccgaggagagatc
attgatccatttgtggaagtggagattatcggtctgcccatcgactgctgcaaggagcaa
acacgcgttgttgacgacaatggtttcaaccccgtgtgggaagagacgctgtccttcacg
ctgcacatggccgaggtggccttggtgcgcttcctggtgtgggatcacgacccaatcggt
cgagacttcatcggccagcggacggttgccttcagcagcctcatgcccggttacagacac
gtctacctagagggcctgaccgaggcgtccatctttgtgcacgtgtcggtgcacgacgtc
tacggcaaatggagtcctctagtcctgaatccgagctttaccataatgcactttttagga
tccagcaagggaaatcaacttcgaggcatccgcggtttgttccaccgttcttccaagtcc
tcggtggatacgacctcggcgggtcttcggaagcgctccatcagcgaccacctgcttcgt
cgcacggccagcgccccagccaagggccgcaagaaaaccaagatgtcgctttccgagtcg
acggcctgcatgtctgagcacaagaacggggtcgaggcgatcggggaggagccggggccg
gaaaagaagccccaggcccggcccctcctcacccacagacccatttctatgcccttagac
aggcttctgcagggacagctaactctgtgctcctcagacaaagagcatgatggtgcaaac
gccgtcgttggaacttattcgtttgacagagccaggtcttcctctgtggatcttctcatg
aaatcatccacttccattcaagaaaccatccaatccccctcgaagatgaggaacaaaaat
cccaataaaccacaggaggcctcttacctggttgtcggtgatgataacattagaaatgag
gacgactatgtcaattaccaagcaagtaataatcgagtcaaccaatcgaagatacactca
gcactttctaccaacaaacagtgtcgatcagataaactagaaacttcttcgatcagcacg
gcgttcaccgttgcaccttctgtgtcctcttcctccgccccttcttccgtcaccccgctt
ccctctatcaacatggaccatgatctgaaaagttctagctctctccatgacagcaccatc
tccagactcattgatgctatgtccttaggcaacgagcaagactcacgaggctccatatca
gctctgattggtcaatttgaaagcactgaaaacgagaaccaaagaacttcccaaatctgc
actccaagaacgaccctttcaccgtccaccattcacctggcagactcaaccggacctgct
cttttctccagtccagaaaccgctgaacttgaagaggtctataccattctcgatgaggag
atgctatcatcaccccctttatcggcgtacaaccagaaaaatcagtccgtccacgatcag
gcaaacactctgaacggcctatcgtcaagcagcttggcttcttctccggtaaaaggggct
caaggtttagggagccagcgcaataagtgttgggacgaaaggaatggagattcagaggag
gtagaggaaagtgtgtacgaggaagtgtttgacccaccagcaccgataacggagcaacag
aggagttctactcaacgatacgtgcgtccacctttgaacaattcttttcagctgtcccat
gaccgtgtcagcaatgcgtttggagaggtagaggtgaacgtcgatgaggatccaaaggag
gtgagcgtaacctcatcgagacgagtatgggaatccctcggtagtccctcaaaacagagt
gctatttaccaaaacgaatccactccaaaatactcccaacaacgacttcctctgccattt
tgtgagcctcagcaatacccaacattttcaacaccatgtccttcctcgtacagtaaacct
ttgtatcaacgaccgaatcaacaatccggtgttcagttttctccgatgcgtagacccgtg
gactctaaattttccaaaccacgacccctaagccacaacggctacccgagtcctcaaagc
aatccctttcattatagtcgagagtttacacaacagagaagcttcaacaacagcccggtt
ccaaacggttttctccaaggcagccagatccccaacagttttcacaagggaagacaagga
tatcaagtcagggagcaggaaagatgcttgcaaaatggattctcctcttcggaaaatctt
cactctgtgccgtcaggaaatagcttcagtgatcgaggcctttactcaatgccttctgat
tttgatacggtgtacagtcacacggactctggtgacttgtcagagtccgcacccccttca
gtctcgcaactaagtgaaatccaagcgtccactccaaagctttcttgcaatcaaaaggta
accgtgtcccaggtacattccgacaccaaagctccaaagatttcaaccccgcgctcttta
tcgacccgtccccagtcgattagcgtggattccacggtcagcactccgtgtaagtccaaa
tctcttggggatctgacatctgaggacatatcatgtaactttcagagcaaataccacatc
ataagtcgtagtttcatcactccacacatgaggagacaaaagagaatgggaaccatgggg
ggcggtactttccagtcacagtcttgtgacccgctgacagaacagttgcgtaaactggtc
aatcttgagattgaagttagtgaaagagacatgcgtcagtctcctcggcgcgatgaagaa
ccctcgcggacaaccagcacagacccctcgacttcccgagatattgacgactcccctcca
ccactcacgcgtcgcttatcgtcccgtagccaaagccgagtgcgccacatcaacagccgc
gctcgcgaaagacagcaggaggcactgaagccacgctcaagcggcgtggtcaacggcacc
gccgctgtaggcggggttgttttgcggaataaaccagcctcacagaattcacccgtgaac
agacactccactggctcttacatcgcaggttatttaggccagctggaggacagaggactt
cccgagggagcttgtacagcgtcacgttacggaaatggcgatcaacattcagatcgttac
tgtaccgatgactcacttcctccttcagactcctcccacttctcatcagagccagaagtc
tacttcctgcttagactttag
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integrated database retrieval system