Syngnathus scovelli (Gulf pipefish): 125971808
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Entry
125971808 CDS
T08785
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125971808 (dscaml1)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Other
125971808 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
125971808
NCBI-ProteinID:
XP_049580771
LinkDB
All DBs
Position
7:1058565..1116305
Genome browser
AA seq
2092 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLFSFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSLLDSFQSGEMKAG
HNVELPCIASGYPNPAIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNIIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHYTVSWYRNTEPILPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVASFSEKVVV
PGEPFSLMCTAKGAPPPTITWTLDDEPVARDLSRVRASQYTHSDGSTVSYVNVSNPQIRD
GGLYRCAARNSAGSAEYQARINVRGNPRIRPMKNITAVAGRSSFVNCRVIGYPYYSINWY
KEGLLLPDNHRQVVFENGTLKLTDVQKGMDEGAYICSVLIQPQLFIKQTVYITVKVPPLI
QPFDFPPTSIGKLMYIACVVASGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKSGILNCSVDGYPPP
KVMWKHGKSALAGIGNPQQYHPVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMALTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDTWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMDVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVISWVEPPRMTLHGVLKGYRVIFWAV
FPDGEWGEMQNITTTKEQVELRGLEKFTNYSIQVLAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCLSPGSGRPMPSEYEANPELVFYRIS
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCNS
VGEPTPTIKWTKDSENTAIPVSLDGQRLIMTNGTLVLRTVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSTERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPIGAVTLEFRPKGTWVWQNVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTLGVALLFIVR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTGNPQSFCAGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQASTPARVLASDWRTVSSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNIPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRAYHTQGRHMTMDSAKQQALTMGHSGLSNLTSSGASSG
GASGGGGGGMSASSSSSTLPQRTLTMPGSSATGVQSAAAAAAATAAAAAGASSSSGGAVG
ATGGTPGGASSSSSKMGGSRDSLLESSSSGLGRLQKQRDGGTGAYSKSYTLV
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacgcggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcc
gtgggggtgtccctgccctgccccgcgggcggcgccccccatgccgtcctgcgttggtac
ctggccgccggagacgacatttacgacgtgccccacatccgccacgtgcacgccaacggc
accctccagctcttctccttctcgccctccgcttataacagcatcatccacgacaacgag
tacttctgcactgccgagaaccaggcgggcaaaatccggagccccagcattcacatcaaa
gcagtgttccgggagccatacacagtccgtgtggccgaccagcgctccatgcgaggtaat
gtcgctgtcttcaagtgcctcatcccctctgctgtccaggagtacgtcagcgtggtgtcc
tgggagaaagacaccgtgtccattgtcccaggtaaccgtttcttcttgacctcatttgga
gcactgtatatctccgaggtgcagaaggaagacgctctgtccacctaccgctgtatcacc
aagcacaagtacagcggcgagactcgacagagtaatggagcccggctctctgttatggac
cctacggagtccaccccgtcactactggacagtttccagtccggtgagatgaaggcaggg
cacaacgtggagctgccctgcatcgcatccggctacccaaacccggccatcagatggttg
aaggatggccggccgctgccggcggactcccgctggacccgccgtatcacgggcctcacc
atttcggacttgaggctggaagacagcggcaactacatctgcgaggtcaccaacagcttc
ggttccaaagaagtgacgggtcacctcaacatcattgagccccttcgggtcaccttgtcc
cccaagaacctcaagacgggcatcagcagcacggtcatcctgtcctgcgccgtccagggt
tctcctcactacaccgtgtcgtggtaccgtaacaccgagcccatcctgcccgaccagcac
ttctccatccaaggcgctcacaacgagaccttgttcatttcggcggctcagaaaagacac
tcgggagcttaccagtgctttgccacgcgcaagggccagaccgcccaggacttctccatc
atactgctggaagatggtaccccacgaatcgtggcttccttcagtgagaaggtggtagtc
ccaggcgagcccttttccctgatgtgcaccgccaaaggagcgcctccgccgaccatcacc
tggaccctggacgacgagccggtggcccgcgatttgtcccgcgtgcgagccagtcagtac
acgcactcggacgggagcaccgtgagctacgtcaacgtcagcaacccgcagattcgcgac
ggaggattgtatcggtgcgccgcacgaaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggcaatccaaggattcgaccgatgaagaacatcacggccgtggcagga
cgaagctcttttgtgaactgccgagtgatcggctacccgtattactccatcaactggtac
aaggagggacttctgctacctgacaaccatcgccaggtggtgtttgaaaatggtaccctg
aagcttaccgatgtccaaaaggggatggacgagggagcttacatctgcagtgtactcata
caacctcagttgttcatcaagcaaacggtttacatcacagtcaaagttcctccgctgatc
cagccttttgacttcccgccgacctccatcggcaagttgatgtacatcgcttgcgtggtg
gcgtccggcgacatgcccatccgcatcacgtggcgcaaggacggccaggagatcgtgcct
tcctcgggcatcaccatcgacaccaaggagttcatgagctccttgcagatctccaaggtg
tcgctgaagcacaacggcaactacacctgcatcgccagcaacgacgctgccactgtgagc
actgagaggcagctcactgtcacagtgcctcctcgttttgtggtgcagcccaacaaccag
gacggaatctacgggaagtcgggtattctcaactgctcggttgatggctaccctcctccc
aaggtcatgtggaagcacggcaaaagcgcactagcgggcatcgggaacccacagcagtac
caccccgtgcctctgacgggccgaatccagatcatgaacaacggttcgctactcatccgt
cacgtcctggaagaggatcgtggtttctacctgtgtcaggcctccaacggggtgggctcc
gacatcagcaagagcatggcgctcacagttaagatcccagccatgatcacaagtcacccc
aacaccaccatggccaagaagggtcacgttaaggagctgaactgcacggctaggggggaa
tggcctatcatcatccgctgggagcgaggcgacacggtcatcgaccctgaccgcaatccc
cgctactccattaccaccagccccaacgagaagacggacgaggtgttgtccactctcaag
ctaaaaccagcagaacgtgaggactcagtcttcttctcctgtcacgccatcaactcgtac
ggtgaaggacgaggcctcatccagctcaccgtgcaagagcccccggatcctcccgaactt
gaggtgcgggaagtaaaagatcgcagtatgaacctacgatggacgcagaggtttgacggg
aacagcgtcatcacctcctatgacattgaatacaagaacaagacagatacctgggagctg
aagcacgctacgcggaacatttcccccactaacaatcaggccaacattgtggacctccac
ccggcgtcggtctacagcatccgcatgtactcctacaacgccatcgggaagagcgaggcc
agtaaggagctcaccatcagcacggaggaagctcagcccgatggtcctcccatggatgtg
atcctgcagccggtgacctctcaaagcatccgggtcacttggaaggctcccaggaaggag
ctacaaaacggagtgatccgaggttaccaaattggttacagagaaaacggtccgggcagc
aacggccaatacagcattgtggagatgaaggccaccggagatagcgaggtgtacacattg
gacaacctgaagaagtttgcccagtacggcgtggtggttcaggctttcaatagagctggc
accgggccctccagctccgagatcaatgcaaccactctcgaagacgttcccagccaacct
cctcagaacgtgcgcgcaatctccgtcacctcagatgaggcggtcatctcttgggtggaa
ccccccaggatgaccctgcacggcgttctgaagggctaccgtgtcatcttttgggccgtc
ttccccgacggagaatggggtgaaatgcaaaacatcaccacaaccaaggagcaggtggag
ctcagaggtctggagaagttcaccaactacagcatccaggtgctggcctacacacaggct
ggcgatggcgtacgcagtaatgtcctgtacatccagacccgggaagactaccccgggccc
ccagccggcatcaaagctgtgccctcctctgccagcagtgtggtggtatcttggttaccc
ccccataaaccaaatggaatcatccgcaagtacaccatctactgcttgagccccggatca
ggccgaccgatgcccagcgaatacgaagccaacccggagctggtcttctaccgcatcagc
cacctcaaccacaggcagcagtacttgatctgggctgcggccgtcaccaccgcaggacgc
ggaaacttcagcgacaaggtcaccgttgagcccgccgccaaggcccctgctaagatccta
tcattcggaggtacggtgaccaccccgtggatgaaagaagtacggctgccttgcaactct
gtaggtgaaccaacaccaaccatcaaatggaccaaagacagcgagaacacagccatcccg
gtgtctctggacgggcagcgtctcatcatgaccaacggcacactggtgctccgcactgtc
aaggctgaagattcgggctactacacctgcacggccaccaacacgttgggctttgacacc
atcatcgttaatcttttagtgcaagttcctccagaccagcctcggctcaccgtgtccacc
acctctacttcctccatcactctggcctggataccaggagataacggaggcagctctatc
aggggatttgtgcttcagtactctgtggacaacacagaagagtggaaagatgtgttcatc
agctctaccgagcgctctttcaaactggacaacctgcgctgcggcacttggtacaaagtc
aagctggcggcaaagaacagcgtcggagcgggacgcatcagtgagatcatcgaggccaag
acgcacggccgagagccccagttcaacaaggaccaacccgttttcacccacatcaattcc
agtcacgcccgcctcaacctgcagggctgggccagcggcggctgtccgatcggcgccgtg
acactcgagtttcgcccgaaaggtacgtgggtgtggcagaacgtgcgcaccaacgccacc
acagacgtgttcctggccgagctgcgtgaggccacctggtacgaactgaagatgaaagct
tgtaacagtgccggctgtggaaaccagagctcccagtttgccacgctggattacgacggc
agcacaattccacccatcaagtcgcccttggaaaagaacgacgacgtcaagaagctgttt
tctatcggctgcccggtgatcttggtcactcttggtgtggcgctcctcttcatcgtccgc
aagaaacgcaaagaaaagaggctgaagagactgcgagatgccaaaagcctagcagagatg
ctgatcagtaaaaacaaccgaagctttgacacgccagtgaagggcccgcctcagggcccg
cgcttgcacatcgacatcccgagagtgcagctgctgatcgaagacaaagagggcatcaag
cagatcggcgaggacaaggccaccatacctgtgaccgacacggagttcaatcagaccggg
aacccgcaaagcttctgcgcaggtgtgtccgttcaccaccctgctctcatccagaacact
ggtcctttgattgacatgtcagacatcagaccaggaaccaatccggtttccaggaagagt
gtcaaatcggcccacagcatcaggaaccgctactccagtcagtggactctgactaagtgt
caggcttccacgccggctcgggttctcgcctcggactggcgtacggtcagctcgcagcac
ggcatcaccgtcaccgagagcgacagctacagcgccagcctctcgcaggacacagataag
ggtcgcaacagcatggtgtccacggagagcgcctcgtccacctacgaggagctggccagg
gcgtacgagcacgccaagctggaggagcatctgcagcacgccaaattcgagatcaccgag
tgcttcatctccgacagctcgtccgaccagatgaccacgggcaccaacgacaacgccgac
agcatgacgtccatgagcacgccctccgagcccggcatctgccgcttcaccgcctcgccg
cccaagccccaggactacgatcgcggcaagaatgtagccgtgcccatcccgcaccgcgcc
aagagtgactactgcaacatccccctctacatgaagtcagaccccttcttccggaagcag
tccgagcaccatgacccgtgtccagtggttcccccccgcgaagcctccatccgcggcctg
gcccagcgggcgtaccacacccaaggccgtcacatgactatggactctgcaaagcagcag
gccctaaccatgggccactctggcctgtccaacctcacctcctctggggcgtcttccgga
ggagcctctggaggaggtggaggcggcatgtccgccagctccagcagctccacgctccca
cagaggactctcaccatgccgggctcctcggcaacgggggtccagagcgccgcggccgcc
gccgcagctaccgccgccgccgccgccggggcgtcgtcatcctccggcggggctgtgggg
gccacgggaggcacgcccggtggcgcctcgtcctcctcctccaagatgggaggatccaga
gactctcttttggagagcagctcgtcaggcttgggcagactacagaagcagagggatggt
ggcaccggggcttactccaagtcgtacacactggtctag
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