Syngnathus scovelli (Gulf pipefish): 125971984
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Entry
125971984 CDS
T08785
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125971984 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125971984 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125971984 (zgc:162872)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
125971984 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125971984 (zgc:162872)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125971984 (zgc:162872)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank_4
Ank
Ank_5
BAR
PH_8
Motif
Other DBs
NCBI-GeneID:
125971984
NCBI-ProteinID:
XP_049581158
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All DBs
Position
7:complement(3193295..3198557)
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AA seq
696 aa
AA seq
DB search
MDALLDFSECVSDSPAFRLNLDQFEEDVFLLQTQLDKVMRLCGKMVEAGQAYNTANQMFL
AGLSELFTRHKEDSVIANCLSQFKEGLQELLTFHAMLLDQSQRAISHQLSSLCKQFLPQL
AETRDEFVRIGDDLDTAALKNAQVSRHKTAEAERASHLLIATRKCYQHFALDYCLQLNTF
KTQQKVDILNSVFSLVNAQLTYFHQGFDLLRDLEPAMKVMATQLCERSDECASKRKELEH
NHLLVQQRDASGETLFRLCVGNDDIIQGYLFKQSRRKSKTWKRCWFSIRDNQLIYRKSHK
DASMLLFEDLRLCAIKSLDDLDRRFCFQLMSVHKCCALQADSEHVRLAWMGALQGSIDLA
YRERGQAAPAQPQEPHPLSGGDNAAANQKTAVLAAALQGAGNRRCCDCGEEEPRWAAVNL
GITVCIQCSGIHRSLGVHVSKVRSLTLDSWEAEQLKLLCVLGNDAINNIYEAQCHDRIKP
TTESPHAEKEAWIRDKYVEKAFVRRNDGAMHHDDVEASPLSHLYRAAVAGDLVALVAALA
QGAPVNGSLAQEEGRTALIGAAQGGSLLASEFLLQNGANVNHRDRRGQGALHAAATAGHT
GQVCLLLKRGANQYAVDESGRDPLAIAVETAHADIVTLLRMARMNEEMRDSEGAFGATGD
DQTFQDIFRDFSNMASHDPEKLARRTFSRDGNDGNP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttgctggacttctctgagtgcgtctcggattctcctgccttcaggctgaac
ctggatcagtttgaggaggatgtgtttcttctacagacacaactagacaaggtcatgagg
ttgtgcggcaagatggtggaggcgggacaagcgtataacacagccaatcagatgttcctc
gccggcctgtccgagcttttcacacgacacaaggaggacagtgtgattgcgaactgcctg
agccaattcaaggaaggcctgcaggagctgctcactttccacgctatgttgcttgatcag
agccagcgagccatcagtcatcagctcagcagcctgtgcaagcaattcctgcctcagctg
gcagaaacgcgcgatgagtttgtgcgtatcggtgacgatctggacacggcagctctgaag
aacgctcaggtgtctcgacacaagactgccgaggccgaaagagcgagtcacctgctcatc
gccacacgaaaatgctatcagcacttcgccctggattactgtctgcagctcaacacgttc
aagactcagcagaaggtggacattttgaactcggtgttctccttggtcaacgctcagctg
acgtactttcatcaaggctttgacctgctcagagaccttgagcccgccatgaaggtcatg
gccacgcagttgtgtgagcggtcagacgagtgtgcgagtaaaaggaaagagctggagcat
aatcatttgctggttcagcaacgagatgcctccggagagacgctattccgattgtgtgtt
gggaatgatgacatcattcaaggttacctcttcaaacaatccagaaggaagtcgaaaacg
tggaagagatgctggttctccatcagggacaaccaactcatctacaggaagtcacacaaa
gacgcgtctatgcttctttttgaggacctgcgattatgcgccatcaagtctttggacgac
ctggaccgacgattctgcttccagctgatgtctgttcacaagtgttgtgcccttcaggcc
gactctgagcacgtgaggctggcgtggatgggagcgttacaaggcagcatcgatctggcg
taccgagagcgaggccaagccgctcccgcgcagcctcaggagcctcacccgttgagcggc
ggtgacaacgctgcggccaatcagaagacggcggtgctggccgcggctctgcagggcgct
ggaaatcgccgttgctgcgactgcggcgaggaggaaccgcgatgggcggccgtcaatttg
ggcatcaccgtgtgcattcagtgctctggaattcaccggagtcttggcgtccacgtgtcc
aaggtgcgctcgctcacgctggactcatgggaagcggagcaactcaagctgctgtgcgtc
ctgggaaacgacgccattaacaatatttacgaggcgcagtgtcacgacagaatcaaaccc
actacggagagtccgcatgctgagaaggaggcctggatacgagacaagtatgtggagaag
gcttttgtgaggcggaatgatggcgcaatgcatcatgacgacgtcgaggcttcgccactg
tcgcatctctaccgggcggcggtggctggagacctggtcgccttggtggcggcgctggcc
cagggggcgccggtaaacgggagtttagcacaggaggaaggacgcactgccctcatcggg
gcggcgcaaggggggtcactgttggcgtccgagttcctgctgcagaacggcgccaacgtt
aaccacagagaccgaagagggcaaggagctctccacgcagcagccactgccggacacacc
gggcaagtgtgtctgctgctgaagcgaggagctaaccagtatgcggtggatgagagcgga
cgcgacccactagccatcgccgtggagacggcgcacgcggacatcgtcacgctgctacgc
atggcccgaatgaacgaggaaatgcgagattccgaaggagcgttcggagctacgggagac
gaccaaacgtttcaggacattttccgagacttcagcaacatggcgtcgcacgatccggag
aagctggccagacgaacgttcagccgcgatggaaatgatgggaacccgtga
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