Syngnathus scovelli (Gulf pipefish): 125971993
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Entry
125971993 CDS
T08785
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125971993 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125971993 (slc6a4a)
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125971993 (slc6a4a)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125971993
NCBI-ProteinID:
XP_049581172
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Position
7:complement(6286970..6293886)
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AA seq
673 aa
AA seq
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METKDLMMTSMLTKDERESEAERGKESQEVKAEEEGTQDENCRLMLADGLAEKGPKSPTP
GQQVSNGFTTSTPQSAKEGAGLSAAYSAGSTSGPAGGSGSAAPLGGLRTLVVQQTSLDRP
RETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELA
LGQFHRNGCISIWKHICPIFKGIGFAICVIALYIAFYYNTIMAWALYYLLSSFQSTLPWT
TCSNSWNTGNCHSYMSTDSNISWSNLSTSPAEEFYTRHVLQVHLSSGLHQLGSVSWQLAL
CLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYVVLLVLLVRGATLPGAWRGVVFYLKPDW
EKLLSTTVWIDAAAQIFFSLGPGFGVLLAYASYNPFHNNCYKDALITSSVNCLTSFLSGF
VIFTVLGYMAEMRQQDVDAVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLD
STFAGLEGVVTAMLDEFPNVLVKRRERFVFGLVCVCYLGALSTLTYGGAFVVKLFEEYAT
GPAVITVVLLEVVAVSWFYGTTRFCNDIQLMLGFYPGCFWRICWVAICPIFLLFIIISFL
AFPPEVKLFDYQYPPWTTALGYSIGVSSLICVPAYMVYHLINAKGTFKQRLSKSITPEPS
NEQHRGFIVTNAV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaagatctgatgatgaccagcatgttgacaaaggacgagcgggagagcgag
gccgagcgaggaaaggagagccaggaggtgaaggcagaagaggagggcacgcaggatgaa
aactgtcgactgatgctggccgacggtcttgcggagaaaggacccaagagtccgactcct
ggtcagcaggtgtccaacggcttcactacgtccacccctcagagcgccaaagagggagcg
ggcctttccgcagcttactccgcaggttcgacctcagggcccgcaggcggctccggatcc
gccgccccgctgggaggtctcaggactctggtggtccaacaaaccagcttggaccggccg
agggaaacttggagcaagaagatggacttcttgctctctgtgattggctacgcggtggac
ctgggaaatgtgtggcgtttcccgtacatctgctaccaaaatggaggaggtgccttttta
cttccctacctgttgatggcggtgtttggaggtgtgccgctcttctacatggagctggct
ctcggccagtttcaccgcaatggctgcatctccatctggaaacatatctgccccatcttc
aaaggtatcggctttgctatctgcgtcatagccctctacattgccttctattacaacacc
atcatggcgtgggccttgtactacctgttgtcgtcgttccagtccacccttccctggacc
acctgctccaatagctggaacacgggcaactgtcacagctacatgtccaccgacagtaat
atttcgtggtccaacttgtccacctcccccgccgaggagttctatactcgacacgttttg
caggtgcacctctcttccggtctgcaccagctcggttcggtcagctggcagttagccctt
tgtttgctcttcatcttcaccatcgtctatttcagcatctggaagggagtcaaaacatct
gggaaggtggtctgggtgacagcaacttttccttatgtggtgctcctggtgctcctcgtc
cgtggggccactctacccggggcctggaggggtgtggtgttttatctcaaacctgattgg
gagaaactgctcagcactaccgtatggatcgatgctgcagctcagatcttcttctcactg
ggtccgggctttggggtcctccttgcttatgccagctacaacccgtttcacaacaactgc
tacaaggatgctttgatcaccagctcggtgaactgcctaaccagctttctgtctggcttt
gtgatttttactgtgctgggctacatggctgagatgaggcagcaggatgttgatgctgtt
gctaaggatgctggacccagtctgctttttattatttatgccgaagccattgcgaacatg
ccagctgcaaccttctttgccataatcttcttcctcatgatcattatgttgggtctggat
agcacatttgccggtttggagggtgtggtcaccgccatgcttgacgagttccccaatgtc
ctggttaagagacgagagcgttttgtctttggtctcgtttgcgtctgctacctcggggcg
ctctccaccctcacatatggaggagcttttgtggtgaagttgtttgaggagtatgccacg
ggacccgccgttatcactgtggtgctgcttgaagtcgtcgcagtttcctggttctatggc
accacccgattctgcaacgacatccagctcatgcttgggttctacccgggatgcttttgg
aggatctgctgggtcgccatctgccccatctttcttctgttcattatcatcagcttcttg
gccttcccgcctgaggtcaagttgttcgactaccaatatccaccttggaccacggccctt
ggctacagtattggggtgtcctcattaatctgtgtgcctgcttacatggtctaccactta
atcaatgccaagggcacattcaaacagcgtttatcaaagagcatcactccagagcccagc
aatgagcaacacagaggcttcattgtcaccaatgcagtctga
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