Syngnathus scovelli (Gulf pipefish): 125972021
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Entry
125972021 CDS
T08785
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125972021 (rin1b)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125972021 (rin1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
125972021
NCBI-ProteinID:
XP_049581266
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Position
1:complement(29263543..29274226)
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AA seq
790 aa
AA seq
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MQEAGASQPGPQRDLSVLDRLLLTHPVWLQLSLKQDSALYILLREPVGTFLVRKCSLSQR
KVLCVRVTADRSWSSVKECFICEEDYTFALESSALSFPDLCRLVAFYCVSRDVLPFPLQL
PDAIAKATTHRQLESISHMGQDFWNSPSASELQNGPLAASGSSLIQAAASERWRVQGRGG
QSKLCFINPLFLQLEVLKHSELQNHSASNKRHRFKRSVRLRLSESSMNLSLEGVGSYSPP
PSMEMPAGSERLRNANPQRRVHSGAGVLRRTPAVSPGSAGSEEEDATAVRAPQVDQPPDV
QQSSPPPPPPEGPAIEVALLAPERRAAPSLAELDSNSSLSSLDEEDDWDSDSESGFQTQS
QGPRRPPLVRSRGRGGLRRMSEAFVCFFAPDKRLTRLVRELSRDRRSVFGGMVQDFLLAH
TGLLKSLSAASLSSSPRVTSVQLLQGVRLFLSQAKCCLLESGELEPPIETLVPENEKDLA
LERAMFSCVLRPLKSHLDAAMAALHRQDASSQRFSRNLARLKDEDSAAQRLGVRTGLPDG
RLVDKVKQKLALMRRTHSPVDKVLLLLQVCKCVQKGLGAPHAGQEVSWEDFLPSLSYAIV
ESNKPHILMEVEYMMELLEPSWLGGEGGSYLTSVFASLHLIQSLDPERTISGCLTSEARE
ALKQWRCRRTLEAQKQKENLQRQRCVRILFQDGERSAVRTLQWRVGESSQALAQLCAATF
GVTDPQQYALYWRSGGEMRPLPPQAQPQDLAGHSEGGPSLSYLRTDHDFSKMRRLTRGGA
VDLSESVCEE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggcgggcgcctcccagccgggtccccagcgggacttgagcgttctggatcgt
ctgctgctgacacacccggtatggcttcagctgtcactcaagcaagactccgccctctac
attctgctgagagagcctgttgggacattcttggtgcgcaagtgcagcttgagtcagagg
aaggttctctgtgtgagggtcacggcagacaggagttggtcctccgtgaaggagtgcttc
atctgtgaggaagactacacgttcgccttggagagctcggcgctcagcttcccggacttg
tgtcgcctggtggccttctactgcgtcagcagggacgtcttgcctttccctcttcagttg
ccggacgccatcgccaaggccacgacgcaccggcaactggagtccatctcgcacatgggc
caagacttctggaactcgccgagcgcgtcggaacttcaaaatggacctctggcggcgtcg
ggcagcagcctgatccaggcggcggcctcggagcgatggcgggttcagggccgcggcggt
caaagcaaactatgcttcataaatcctctcttcctgcagctggaagtcttgaagcattca
gaactccagaaccacagtgcctcgaacaagcgacaccgtttcaagcgcagcgttcgactc
cgcctctccgagtcctccatgaatctgtccctggagggggtgggctcctactccccgcct
ccgtccatggagatgcccgctgggtcagagaggttgcgcaacgctaatccccagaggaga
gttcactccggagcaggggtcctgaggaggacgcctgccgtgtcaccggggtcggcgggg
tccgaggaagaggacgcaacggctgtgcgagcgcctcaagtggaccagcctcccgatgtc
cagcagtcgtcgccgccgccgccgccgccagaggggcccgccatcgaagtggctctgctg
gccccggagcgccgggcggcgccgtctctggccgagctggacagcaacagctccctcagc
agtctggacgaggaagacgattgggattccgattccgagagcgggttccagacccagagc
cagggcccccggcggccgccgctggtgcgctcgcgaggccgcggcggactgcgccgcatg
agcgaggcctttgtgtgtttcttcgctccggacaagcgtctgacgcgactggtgcgggag
ctgtcccgggaccggcgctcggttttcggcgggatggtgcaggacttcctcctggctcac
acgggcttgctgaaatcgctatcggccgcctcgctatcctcgtcgccgcgtgtgacgtcc
gtgcagctgctgcagggtgtgcgcctgtttctatcgcaggccaagtgttgcttactggaa
agcggcgagctggaacctcccatcgaaactttggtgccagaaaacgagaaagatcttgcc
ctggagcgtgccatgttctcctgcgtgctgcgccccctcaagtctcacctggacgccgcc
atggcggcgctacaccggcaggacgcgtccagccaacgcttcagccgcaacctggcgcgt
ctaaaagacgaggacagcgccgcccaacgcttgggcgtgcgcacgggcctgcccgacggg
cggctggtggacaaagtgaagcagaagttggcgctgatgcggcgcacgcattcgcccgtc
gacaaagttctgctgctgttgcaggtctgcaagtgcgtgcagaagggcctgggcgccccg
cacgcaggacaggaagtgagctgggaggatttcctgccgtcgttgtcctacgccatcgtg
gagtccaacaagcctcacatcttgatggaggtggagtacatgatggagctcctggagcca
tcttggctcggcggtgaaggcggctcctacttgaccagcgtcttcgccagcctgcatctg
attcagagcctggacccggagcgaaccatctcaggctgccttacgtccgaggcccgggag
gcgctgaagcagtggcgctgtcggcgaaccctcgaggctcagaagcagaaggagaacctg
cagcgtcagaggtgcgttcggatactgttccaggacggggagcggagcgccgtgcggacc
ttgcagtggcgagtgggcgagagtagccaggcgctggcgcagctgtgcgccgccaccttc
ggcgtgactgacccgcagcagtacgcgctgtactggcgcagcggcggcgagatgcgaccc
ttgcccccccaggcgcagcctcaggacctggcgggccacagcgagggaggcccctccctc
tcctacctgaggaccgaccacgacttcagcaagatgcggcgactcaccagaggtggcgcc
gtggacttgagtgagtcggtgtgcgaggagtga
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