Syngnathus scovelli (Gulf pipefish): 125972029
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Entry
125972029 CDS
T08785
Symbol
paf1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125972029 (paf1)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
125972029 (paf1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
125972029
NCBI-ProteinID:
XP_049581245
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Position
7:complement(2906169..2909716)
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AA seq
536 aa
AA seq
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MAPTIQTQAQREDGHSRPSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFV
QYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRIDPNILLDPADEKLLEEDIQAPSSSK
RSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQISAI
EKTFEDAQKGIAQHYSKPRVTPVEVLPVFPDFKMWINPCAQVIFDSDPAPKDMSAIAGVE
MMSQAMIRGMMDEEGNQFVAYFLPNEDTLRKRKRDCDEGLDYMPEDLYDYKIAREYNWNV
KNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMNEK
ELEAQEARKAQLENHEPEDEEEDMDMDKDSGDDKERGSGSEAENSASESDRDDEEPERRA
PEEEDDDEVRDRAKIKNKRRRSSGSESGEDRTREMRDEEEIFGSDDDEDSDNEPKRSSGE
DASDDDERGGGSGGGVRSLSASPAPSEHSSEHSEAQAPSASASERASDSSDASDSE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgacgattcagacgcaagcacaacgcgaggacggccacagtcggccgtcatca
cacagaactgtccctgagcggtcaggtgtggtctgtcgggtgaaatactgcaacagcctg
cccgatatcccgtttgaccccaaattcatcacatacccgtttgatcagcacaggtttgta
cagtacaaagctacatctctggagaaacagcataagcacgagcttctgaccgagccggac
ctcggtgtcaccatcgatctcatcaacccggacacgtaccgtatagaccctaacatactc
ttggatccagctgatgaaaaactgttagaagaggacatccaggctccgtccagctccaag
agatcccagcagcacgctaaggtggtgccttggatgagaaagacggaatatatttccacc
gagttcaacagatacggcgtctccaatgagaaagtggaagtcaagatcggcgtgtctgtc
aagcaacagttcacagaagaggaaatctacaaggacagagacagccaaatctccgccatt
gagaaaacttttgaggacgcacagaaagggatcgctcagcactacagcaaacctcgagtt
actcctgtggaggttttgcctgtcttcccggatttcaagatgtggatcaacccgtgcgct
caggtcatcttcgactcggatcccgctcccaaagacatgtcggcaattgcaggcgtggaa
atgatgtcccaagccatgatcagaggcatgatggacgaggaagggaaccagtttgtggcc
tacttcctgcccaacgaggacacgcttcgcaaacggaagcgagactgcgacgaggggctg
gactacatgcctgaggatctctacgactacaagatcgccagggagtacaactggaacgtg
aagaacaaagccagcaagggctacgaggagaattactttttcatcttcagagatggcgac
ggggtttactacaacgagctggaaacaagagtgcgtctgagcaagaggcgagccaaggcg
ggcgcgcagtccaccaccaacgccgtgctggtgtgcaagcacagagacatgaacgagaag
gaactcgaggcccaggaagcccgaaaagctcagctggagaaccacgagcccgaggatgaa
gaggaagacatggacatggacaaggactctggcgatgacaaagagagaggcagcggcagc
gaggcggagaattccgccagcgagtcagacagggacgacgaagagccagagaggcgggcg
ccagaggaggaggacgacgacgaagtccgagacagagccaagattaagaacaagaggagg
cggtcgagcggaagcgagagcggcgaggaccgcacccgcgagatgcgggacgaggaggag
atctttggcagcgacgatgatgaagacagcgacaacgagccgaagaggagcagcggcgag
gatgccagcgacgacgacgagcgaggaggaggaagcggaggcggcgtcaggagtctcagc
gcctccccggctcccagtgagcacagcagtgagcactcggaggctcaggcgccgagtgcc
agcgccagcgagagggcgtcggattccagcgatgccagtgactctgaatga
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