Syngnathus scovelli (Gulf pipefish): 125972079
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Entry
125972079 CDS
T08785
Name
(RefSeq) claudin-3
KO
K06087
claudin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03272
Virion - Hepatitis viruses
sscv04382
Cornified envelope formation
sscv04514
Cell adhesion molecules
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125972079
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125972079
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125972079
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125972079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125972079
04147 Exosome [BR:
sscv04147
]
125972079
04515 Cell adhesion molecules [BR:
sscv04515
]
125972079
Cilium and associated proteins [BR:
sscv03037
]
Other cilia and associated proteins
Stereociliary proteins
125972079
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
125972079
Exosomal proteins of colorectal cancer cells
125972079
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
L1 family
125972079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF7139
DUF2232
Motif
Other DBs
NCBI-GeneID:
125972079
NCBI-ProteinID:
XP_049581328
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All DBs
Position
7:3616548..3620231
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AA seq
378 aa
AA seq
DB search
MPSAGLEILGLLLAVLGWILALTSCILPMWRVTAFIGSNIVTAQNIWEGIWMSCVVQSTG
QIQCKIYDSMLALSGDLQAARALTVISIVVGLVGILVAMTGAKCTNCVEEEGAKARVMIG
AGAAFILASLTQLIPVSWSANAIIAEFYNPVVLSAQKREMARRMSVGLELLGISLCILGW
IIGIVACALPMWRVTAFIGSNIVTAQIIWEGLWMTCVVQSTGQMQCKVYDSMLALSQDLQ
AARALTVISILLAIMAVLIGITGAKCTNCIEEEASKAKVMIASGVFFIVSGVMQLIPVSW
TANTIIRDFYNPLLTDAQRRELGAALYIGWAAAALLILGGGLLCCSCPPSEARYSNSRMA
YSATRSAGGQAMERKDYV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggcgggattggagatactcggactgctgctggccgtgttgggatggatccta
gccctgacgtcgtgcattctacccatgtggagggtgacggccttcatcggcagcaatatc
gtgacggcgcagaacatctgggaggggatctggatgagctgcgtggtgcagagcacgggt
cagatccagtgtaagatctacgactccatgctggccctcagcggcgatctacaggccgcc
cgggctctcactgtcatctccatcgtggtgggcctggtgggcatcctggtggccatgacc
ggggcaaagtgcaccaactgcgtggaggaggagggggccaaagcccgggtgatgatcgga
gcgggggcggcgttcatcctggcgtcgctgacgcagctcatcccggtgtcgtggtcggcc
aatgccatcatcgctgaattctacaatcccgtggtcctcagtgctcagaagagagagatg
gctcgcaggatgtccgtgggtttggagttgctgggcatctccctgtgcatcctgggatgg
atcattggcatcgtggcttgcgcccttcccatgtggagggtgacggccttcatcggcagc
aacatcgtgacggcgcagatcatctgggaaggcctgtggatgacctgcgtggtgcagagc
acgggccagatgcagtgtaaggtctacgactccatgctggccttgagccaagacctccag
gctgcccgcgccctcaccgtcatttccatcctgctcgccattatggccgtgttgatcggc
atcaccggcgccaagtgcaccaactgcatcgaggaggaggcctccaaggccaaggtgatg
atcgcttccggcgtcttcttcatcgtatcgggcgtcatgcagctcatccccgtctcctgg
acggccaacaccatcatccgggacttctacaacccgctgctgaccgatgcccagaggcgg
gaactgggcgccgcgctctacatcggatgggcggccgccgcccttctgatcctgggcggc
ggactgctctgctgctcgtgcccgcccagcgaagcccgctacagcaattcccgaatggcg
tattcggcaacccggtcggcggggggccaggcgatggagaggaaagactacgtgtga
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