Syngnathus scovelli (Gulf pipefish): 125972111
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Entry
125972111 CDS
T08785
Symbol
lrp10
Name
(RefSeq) low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125972111 (lrp10)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125972111 (lrp10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
125972111
NCBI-ProteinID:
XP_049581486
LinkDB
All DBs
Position
1:complement(29516883..29522486)
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AA seq
745 aa
AA seq
DB search
MVHIPSLLLFCFTACSRTQVALFFEHCGHSSQVLDSDVGEIRSSAYHTYSYHFGATYDCW
TIKGSVGEPVVLSFSQFSARCRNEWLAIKSSGGGTPLILCGSKLPPPVEFPGGNITVVHH
FLPQVYPVSSFRLNYARDATFGQCPRTSFKCPGGRCLPLSWRCNDQAECLGEGAGADEEG
CGAEGTPPGAPERNGAGDWREPSPSAKSHGGDRAEELLALLKERQETPATAAPVSWPCGG
LLRTFYGTFCPPSLRGPPLHCVWTLDPDDSRPLKLDLQQLVLGRGDTLTIHNGAQGEGDV
IKIITSASNYKSLQVESRTGLLSLTYQTAAGSEGGGFNATFHVGGYCPPWEGRCGGASGG
CFTQEQRCDGKWDCPESGRDEEGCRGCGRQQFACGVPGGQRAAAGRFAGRPVCYPASERC
NYQLYCADGSDERDCTVCQPGTFHCDTDRCVFESWRCDGQVDCHDGTDELNCTVVLPRKV
ITAATVGSLVCGLLLVVAMGCTCKLYSLRSREYSMFAPINRHEAQLIQQQAPPSYGQLIA
QGVIPPVEDFPTENPNQTSTLSLRGILQLLRQDAVTSPHRRRRPRVVRRLVRRMRRWGLI
PRQPSRPSQTAGQRPPDAAPPDQEPAPAAPGGSSSSAEGAQRPAPQKVSLSVRAPPASRA
SPPPPPPYAPPAEAPQTPPVAVPAGGPSLASILHTLGLSLSLFRASPPSGNSAPLSASPD
DDVLLTPLCDDDAASDEDDDVPLLT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacatccctagcctcctgcttttttgcttcacggcatgcagccggacacaagta
gcgctctttttcgagcactgtggacattcctctcaagtgttggatagcgacgtaggcgag
atcaggagttctgcttaccacacgtactcctaccattttggtgccacgtatgactgctgg
accattaagggttcggtgggagaaccggtcgtcctcagcttctcgcaattttcagctcgg
tgcagaaatgagtggctggccatcaaatcgtccggcggcggcacgccgctcattttgtgt
ggctccaaattgcccccgcccgtcgaattcccgggcggaaacatcacagtggtgcaccac
ttcttgccacaagtctatcccgtgtcgtcgtttcgcttgaattacgccagagatgcgact
ttcggccagtgcccccggacgtccttcaaatgcccgggaggccgctgcctgcccctctcg
tggcgttgcaacgaccaagccgagtgtctgggggaaggcgccggcgccgacgaggagggc
tgcggggccgaggggaccccgcccggggcgcccgagaggaacggcgccggagattggcgg
gagcccagtccgtcggcgaagagccacggcggcgacagggcagaggagctcttggccctg
ctgaaggagaggcaggagaccccggcgacggccgctcccgtctcgtggccctgcgggggg
cttctgcggaccttctacgggacattttgtcctccgtctctccgcggcccccctttgcac
tgcgtttggactctggacccggatgactcccggcccttgaagctggacctgcagcagcta
gtgctggggcgcggcgacacgctcacgatccacaacggagcgcaaggcgaaggagacgtc
attaaaattatcaccagcgcctccaactacaagtcgctgcaagtggagtcgcgcaccggc
ctgctgtcgctgacctaccagacggcggccggctcggagggcggcggcttcaacgccacc
ttccacgtgggcggctactgcccgccctgggagggccgctgcggcggcgcctcgggaggc
tgcttcacgcaggagcaacgctgcgacggcaagtgggattgccccgagagcggccgggac
gaggagggctgccggggctgcggccgccagcagtttgcctgcggggtgcccggaggccag
agggcggcggccgggcgcttcgccggccgccccgtctgctatcccgccagcgagcgctgc
aattaccagctgtactgcgccgacggcagcgacgagagggactgcaccgtgtgtcagccc
ggaaccttccactgcgacaccgacaggtgcgtatttgagagctggcgctgcgacggccag
gtggactgccacgacggcacggacgagctcaactgcaccgtggtcctgccgcgcaaggtc
atcacggccgccacggtgggcagcctggtctgcgggctgctgctggtcgtcgccatgggc
tgcacctgcaagctctactcgctgcggagcagagagtacagcatgtttgcgcccatcaac
cgacacgaggcgcagctgatccagcagcaggccccgccctcttacggccaactcatcgcg
caaggcgttatccccccggtggaggacttccccacggaaaaccccaatcagacttccacc
ttgtctctgaggggaatcctgcagctccttcgccaggacgccgtcacgtccccgcaccgg
agacgcaggcctcgcgtggtccgccgcctggtccgtcgcatgagaaggtggggtctgatc
cccaggcagccctccagaccttcccagacggccggccagcggccgcccgacgctgcccct
ccggatcaggagcccgctcccgccgctcccggcggctcctcgtcttcggcggagggcgcc
cagcggcccgcgcctcagaaagtgagcctgtccgtcagggcgccgccggcgtctcgcgcc
tccccgccaccgccgcccccgtacgcgccacccgccgaggcgccccaaacgccccccgtg
gccgtcccggccggcggcccgtccctggcgtccatcttgcacaccctgggcctgagtctg
tccttgttcagagcctcgcccccgtccggcaactctgcgcccctctcggcctcccctgac
gacgacgtgctgctcactccgctttgcgacgatgacgccgcctcggacgaggacgacgac
gtgcctttgctcacttga
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