Syngnathus scovelli (Gulf pipefish): 125972204
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Entry
125972204 CDS
T08785
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 15-like
KO
K08629
a disintegrin and metalloproteinase with thrombospondin motifs 15 [EC:3.4.24.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125972204
Peptidases and inhibitors [BR:
sscv01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
125972204
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
TSP1_ADAMTS
Reprolysin
ADAMTS_CR_3
Reprolysin_5
TSP_1
TSP1_spondin
Reprolysin_3
Pep_M12B_propep
Reprolysin_2
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
125972204
NCBI-ProteinID:
XP_049581656
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Position
7:complement(12962391..12981095)
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AA seq
942 aa
AA seq
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MALLTTFTLIICVKVVVYVRFTHGMETDFCKPLRVDPLAYGKHLQNEKHVTFRINAFKQE
FYLHLQPDSNFLGGDLNPFEPNASTPADLGRCFYSGNVNSQADSFAALSLCKGLNGAFYE
NGMEYFISLERGEDGTAQLGDSSSKTHVIHRRRSSAPLVGNFTSRCGVTPDSNFNTSLEK
YMYMKEMGIGGSSETVLERLSRSKRFTSIPRFVEVLVVADPSMDSFHGDELKHYLLTLMS
VAAKLYKHPSILNSINIVVVGFVVLKEDDRGPKVSSNAALTLRNFCSWQKKLNKHNDKHP
EYWDTAILFTKQDLCGATTCDTLGMADVGTMCDPKRSCSVIEDDGLPSAFTTAHELGHVF
NMPHDNVKACEDVFGKLKDNHMMSPTLIQIDRNRPWSVCSAAIVTEFLDRGHGDCLLDQP
QRQLSLPDNLPGASYSLHSQCELAFGDGSKPCPYMQPCTKLWCTGKARGQLVCQTRHFPW
ADGTSCGTGRVCYQGACTEKNTTIHIKVDGRWGKWGSFGDCSRTCGGGVQLARRECNNPV
PENGGKYCYGLRIKYRSCNLNLCLDTDKSFREEQCEAFNGINLNTNRLGSSVVWVPKYSG
ISPKDKCKLICRANGTGYFYVLAPKVVDGTPCSPDSTAVCVQGRCIKAGCDGKLDSKKKF
DKCSVCGGDNQSCKKVSGMFTKPIHGYNFVATLPVGASNIDIRQRGYRGIVSDENYLAVK
NRHGKYLLNGNYVVSAAERDLIVKGSLLRYSGTSTSVEILQSTRPLQEALTVEVLSVGKM
TPPRVRYSYYLAKESKEEKVLRKEEKNHASHNSVLLNGNKVEAQKKQMGKQPVKHWVTGS
WDACTVTCGSGLQKRLVMCQNTDGNPAFGCNSAVRPVALRACGDPCPIWDVGDWSHCSKS
CGRGFKRRPVRCMTENGLQLPRDHCSGRKKPQELDLCYLSLC
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctttactaactactttcactttgataatttgcgtaaaagtggttgtttatgtgaga
tttacacacggcatggaaactgacttctgcaaacctttacgagtggacccccttgcgtat
ggaaagcatttacagaatgaaaaacacgttactttcaggatcaatgctttcaagcaggaa
ttttatcttcatctacagccggattcaaattttctcggaggggatttaaacccattcgaa
cccaacgcatcaacacctgcggacctcgggagatgcttctactccggtaacgtcaattca
caggcggactcgtttgctgcgctaagcttgtgtaaaggtctcaacggggcgttctatgaa
aacggcatggaatatttcatcagcctagaaagaggtgaggacggaacagcccagcttggg
gactcttcatccaagacacacgtcatccaccgccggagaagctctgcgcccttggtcgga
aacttcaccagcaggtgtggagtgacacctgactctaacttcaacacatccctggaaaaa
tacatgtatatgaaagaaatggggattggaggctcgtcggaaactgtgctggaaagactg
agtaggtccaaaagatttacctccatccccagatttgtggaggtgctggttgtggcagat
ccgtccatggattcatttcacggggatgaattgaaacattacctgctgacactcatgtct
gtggctgccaagctttacaagcaccccagtatcttaaactccattaacatagttgttgtg
ggctttgtggttctgaaggaagatgacaggggtccaaaggtttccagtaatgcagctcta
actctgcgcaatttttgctcttggcagaagaagttaaataagcacaacgacaagcatcct
gagtactgggacactgcaattcttttcaccaagcaggatctttgtggggccacaacctgt
gatacgctggggatggctgatgttggaaccatgtgtgaccccaagaggagttgctctgtc
attgaagatgatggcctaccttcagcatttacaacagcccatgaacttggtcatgtcttc
aacatgccccatgacaacgtgaaggcatgtgaggacgtctttggaaaactaaaagataac
cacatgatgtccccaactctaattcagatcgacaggaatcgtccctggtctgtgtgcagt
gcagcgattgttactgaatttctggatcgaggtcatggagactgcctgctggatcagccc
cagaggcagctgtctctcccagataacctgcccggcgccagttacagtcttcatagtcag
tgtgaactggcttttggggatggctccaagccgtgcccctacatgcagccctgcaccaaa
ctgtggtgcactgggaaagcccgtggacagctggtctgtcaaaccagacactttccctgg
gcagatggcaccagctgtggcactggtagggtgtgttaccaaggggcctgcactgagaag
aacacaaccatccacatcaaggtggatggtagatgggggaagtggggctcatttggagat
tgttccagaacatgtgggggaggtgtccaactggccaggagagagtgtaacaacccagta
cctgagaacggaggcaaatattgctatggccttcgaattaagtatcgttcctgtaacctc
aacctttgtcttgatacagataagagtttccgtgaagagcagtgtgaagcgttcaatggc
ataaacctgaacacaaacagactgggctcgtctgtggtctgggttcctaagtattctggc
atttcccccaaggacaaatgcaaactcatttgtcgtgccaatgggactggttatttctat
gtccttgctcccaaggttgttgatggcacgccctgttcgccggactccactgctgtatgt
gttcagggaagatgcatcaaagcaggctgcgatgggaagcttgactccaagaaaaagttt
gacaaatgtagcgtgtgtggcggtgacaaccagagctgtaagaaggtctccggaatgttc
acaaaacccattcatggctataactttgtggcgacgctgcctgttggcgcatcaaacatc
gacatccgccagcggggctaccgaggaattgtcagtgatgaaaactaccttgcagttaag
aacaggcatgggaagtacctgctgaatggcaactatgtggtgtcagctgcggagcgcgac
ctgatagtgaagggcagcctgttgcgctacagtggcacttcaacatccgtggagattctt
cagtccactaggccgctgcaagaggcactgacagtggaggtgctctcagtggggaagatg
acccctcccagagtgcgctactcctactaccttgccaaagagagtaaagaggagaaggtc
ttacggaaagaggagaagaaccatgcgtcacacaatagcgtcttactgaatgggaacaaa
gtagaagcccagaaaaagcaaatggggaagcaaccagtaaagcactgggtgaccggaagc
tgggatgcatgcacagtaacttgtggtagcggcctgcagaagaggctggtaatgtgtcag
aatacagacgggaatccggcctttggctgtaacagtgctgtcagacctgttgctctaaga
gcgtgtggagatccatgtcccatttgggatgtcggggactggtctcactgttccaaatcc
tgcggcaggggcttcaaacggcgaccagtgcgctgtatgactgaaaatggacttcaactg
ccgagagaccactgctctggaagaaagaagcctcaggagctagacctctgttatttgagt
ctgtgttaa
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