Syngnathus scovelli (Gulf pipefish): 125972205
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Entry
125972205 CDS
T08785
Symbol
gria4a
Name
(RefSeq) glutamate receptor 4a isoform X1
KO
K05200
glutamate receptor 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125972205 (gria4a)
04082 Neuroactive ligand signaling
125972205 (gria4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125972205 (gria4a)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125972205 (gria4a)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
125972205
NCBI-ProteinID:
XP_049581657
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Position
7:complement(12195780..12268616)
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AA seq
907 aa
AA seq
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MRINIFSWYFLGLCSILWGLTTGAFPSSVQIGGLFIRNTDQEYTAFRLAIFLHNTSPNAT
EAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVNTLTSFCGALHISLV
TPSFPTEGEAQFTLQLRPSIRGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNG
WQVSAICVESFNEAGYRRLLEDLDRRQERKFVIDLEPERLQSMLEQAVSVGKHVKGYHYI
IANLGFKDISLERFMHGGANVTGFQLVDFSKAIVIKLMQRWNKLDQREYPGSESPPKYTS
SLTYDGVLVMAEAFRTLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERALKQVRIQGLT
GNIQFDHFGRRINYTMDVFELKSNGPRKIGYWNDIDKLVLVQNENSLSNDSSAMENRTVI
VTTIMEGPYVMLKKNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPE
TKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS
FLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHAEEPEEGTTEQGPNDQPPNEFGIF
NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIE
SAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVR
KSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGIATPKGSQLRTPVNLAVLKLS
EAGVLDKLKNKWWYDKGECGPKDSGSKDKSSQALSLSNVAGVFYILVGGLGLAMLVALVE
FCYKSRAEAKRMKLSFSEAMRNKARLSITGSVGENGRVLTPDCPKAVHTGHATLRHPGLA
VVSTGLP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaatattttctcttggtactttctgggcttgtgttccatcctttggggtttg
acgacgggagcgttccccagctcagtgcagattggcggcttgttcattaggaatactgat
caggaatacactgcctttcgactagctatcttccttcacaacactagccccaacgctacg
gaagcccccttcaacctggtcccacatgtcgacaatatcgagacagccaacagctttgca
gtcaccaatgcattctgttctcagtattcaaggggagtctttgccatattcggcctttat
gacaaacgctcagtcaacacgctgacatcattctgtggggccctgcacatcagcctggtg
acacccagcttccccaccgaaggagaggctcagttcaccctgcagctgaggccatccatc
agaggggcattgctttccctcttggaccactatgactggagccgatttgtcttcctctac
gatacagacagaggttatgcgatcctgcaagcaatcatggagagagcggggcaaaacggc
tggcaggtgagtgcaatttgtgtggagagtttcaacgaggctggatatcgccgacttcta
gaagacctggaccgacgtcaagagaggaagtttgtcattgacctggagccagagagacta
cagagcatgctagaacaggcagtcagtgtgggaaaacacgtaaaaggttaccactacatc
atagcaaacctgggatttaaagacatttctttggaaaggttcatgcacggtggtgccaat
gtgactggtttccagctagtggacttcagcaaggctatcgtcattaaactgatgcagcgg
tggaacaaacttgatcagagagaatatcctggatcagagagtccacccaagtatacttca
tccttaacctatgatggtgtgctcgtaatggctgaagcctttcgcacgcttcgtcgtcaa
aaaattgacataagtcgacggggaaatgctggagactgcttggccaatcccgctgctccc
tggaatcaaggaatagatatggaacgagcactcaaacaggtgcgcattcagggcctgact
ggcaatatccaatttgatcactttggtcggagaatcaattataccatggatgtgtttgaa
ctgaaaagcaacggaccacgcaagattggttactggaatgacatcgacaaacttgtcttg
gtccagaatgaaaattccttgtccaatgacagctcagcgatggagaaccggactgtaatc
gtgacaacgatcatggagggcccctatgtgatgctgaagaagaactgggagctatatgaa
ggcaatgaccagtatgagggctactgtgtggatctggcctcagagatcgccaagcacatt
ggaatcaaatacaagatctccattgtgcctgatgggaaatacggagccagagatccagag
acaaagatatggaacgggatggtgggcgagcttgtttatgggaaagcagagatcgcagtg
gccccacttaccatcactttggttagagaagaggtgatcgacttctcaaagcctttcatg
tctctgggaatctccatcatgattaagaagcctcagaagtccaaaccaggtgttttctcc
ttcctggacccgctggcctatgaaatttggatgtgcatcgtgtttgcttacatcggagtc
agcgtagtgctgtttttggtgagtcgcttcagtccttatgagtggcatgctgaggaacca
gaggagggcactacagagcagggccccaacgaccaacctccaaatgagtttggcatcttc
aactccctctggttttcactaggagctttcatgcaacaaggctgcgacatctcaccgcgg
tctctgtctggacgtattgtgggaggtgtgtggtggttctttacccttatcatcatctcg
tcttacacagccaacctcgctgccttcctgactgtggagaggatggtttcccccattgag
agtgctgaagacttggccaaacagacagagatagcctatgggacactggactcaggttct
acgaaggagttcttcaggaggtccaaaatagctgtatacgagaagatgtggtcgtacatg
aagtcggccgagccaaccgtcttcaccaaaaccactgctgaaggtgtggcgagggtgcgc
aagtctaaggggaagtacgccttcctcctggagtctaccatgaatgagtacacggagcag
cgcaagccttgtgacaccatgaaagttggaggcaacctggattccaaaggctatggaatt
gctacacccaaaggctcacagttaagaaccccggtaaaccttgccgttttgaaactgagc
gaagcgggcgtcttagacaaactgaaaaacaaatggtggtatgacaagggagaatgtgga
cccaaggactctggaagtaaggacaagtcgtctcaggccctgagcctgtctaacgtggcc
ggggtcttctacatcctcgtgggcggcctgggcctcgccatgcttgtggcgttggtcgag
ttctgctacaagtcgcgggccgaagccaaacgcatgaagctgtctttttccgaagccatg
cggaacaaggctcgtctgtccatcacaggaagtgtgggggagaacggccgcgttctaacg
ccagactgccctaaagcagtgcacactggccatgccaccctccgacaccccggccttgca
gtggtctccaccggactgccctga
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