Syngnathus scovelli (Gulf pipefish): 125972228
Help
Entry
125972228 CDS
T08785
Symbol
appbp2
Name
(RefSeq) amyloid protein-binding protein 2 isoform X1
KO
K25806
amyloid protein-binding protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125972228 (appbp2)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
125972228 (appbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_7
TPR_1
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
125972228
NCBI-ProteinID:
XP_049581748
LinkDB
All DBs
Position
7:16242409..16405671
Genome browser
AA seq
611 aa
AA seq
DB search
MAAVELEWIPESLYNTAISIVVDNYIRSRKDIRSLPENIQFDVYYKLYQQGRLCQLGGEF
CDLEVFAKVLRASDKRHLLHHCVQSLMDHGVKVTLVLANSFSRRCSCIADSPAHVKDKTI
QFGFLLGGFLSDAGWYGDAEKVFLSCLQLCALHSDVPHCYSAIECCVRILHVRNGNCKFH
LGEETFKLAQSHMEKLAKHGHEANKAALYGEFCGLLFAKSHYDEAYRWCVEAMKEIIPGL
PVKVVIDVLRQASKSLKSINLLQACVVKREFRKAEKLIKHGIFLAREHFGHTHPKYSDTL
LDYGFYLLNVDNICQSVTIYQTALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFD
NALFHAERAIDIITHVLPEDHLLLASSKRVKALILEEIAIDCHNKETEERLLQEAHDLHL
SSLELAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGHEDYEVA
LSVGHLASLYNYDMNQYEDAERLYLRSISIGKKLFGEGYSGLEYDYRGLIKLYNSVGNYE
KVFEYHSILSNWNRLRDRQFAVADALEDVNTTPLMTQEVVHAFLFGSKLTQTNTKSTLAL
GDIVRDQNTWH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtggagctcgaatggattccagagtcactatataacactgctatttcgatt
gtggtggacaattacattcgatcaagaaaggacatacgctccctcccagaaaacatacag
ttcgatgtctactataagctttaccagcagggcaggctctgtcagctaggaggggagttt
tgtgacctggaagtgtttgctaaagttcttcgagcttcagacaagaggcaccttctacac
cactgtgtccagtctttgatggaccatggggtgaaagtcacattagtgctggccaactca
ttcagccgccgctgctcctgcattgcagattctcctgctcatgtgaaagacaagactatc
caatttggctttctgctggggggattcttgtctgacgctggctggtatggagacgctgag
aaagtttttctttcctgcttgcagctctgtgcgctccacagtgatgtgccacactgttac
agtgcaatcgaatgttgtgtcaggattcttcatgtgcgcaatggtaattgtaaattccat
ctgggggaagagaccttcaagcttgctcagtcgcatatggaaaaattagccaaacatggc
catgaggccaacaaggcagcattgtatggagagttttgtggtttgctttttgctaaaagc
cattatgatgaggcatacagatggtgtgtagaggccatgaaggaaattattccagggctg
ccagtcaaagtagtcatcgatgtccttcgccaggcttccaagagtcttaaatctattaat
ctgcttcaggcctgtgtggtgaagagagaattcagaaaggcagagaaactcattaaacat
ggaatatttctagcaagagaacactttgggcatacgcatcctaaatattcggacacattg
ctggattatggcttttacttactaaatgtagacaacatatgccagtcggttactatttac
cagacagcactggacatcagacagtctgtatttggaggaaaaaacatccatgttgccaca
gctcatgaagacctggcctattcctcctatgttcaccagtacagctctgggaaattcgat
aatgcgctatttcatgcagaacgggctatagacatcattactcatgttctgcctgaggat
catctgcttctagcctcatctaagcgagtcaaagccctgatcttggaggaaatcgcaatt
gattgccacaataaagaaacagaagagcgcctactgcaggaggcgcatgatctgcacttg
tcctctttggagcttgcaaagaaggcttttggagaattcaacgtccaaacagccaaacat
tatggcaacctaggacggctctatcagtccatgagaaagttcaaggaagcagaggagatg
cacatcaaagccatccaaattaaggagcagcttctgggccatgaggactatgaggtggca
ctatctgtgggtcatctggcctccctgtacaactatgacatgaaccaatatgaagatgca
gagaggctgtacctgcgctccatatctataggaaagaagctgtttggagagggctacagt
gggttggagtacgattacagaggtctgatcaaactctacaactctgtgggtaactatgag
aaggtatttgaataccacagtatactatccaactggaatcgcttgagggacagacaattt
gccgtggcagatgcccttgaagatgtcaacactacacccttgatgacccaggaagtggtt
catgcattcctgtttggttcaaagctcacccaaacaaacaccaaatccacccttgccttg
ggtgacatagttcgtgatcaaaatacatggcattaa
DBGET
integrated database retrieval system
