Syngnathus scovelli (Gulf pipefish): 125972231
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Entry
125972231 CDS
T08785
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125972231 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125972231 (msi2b)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125972231 (msi2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
125972231
NCBI-ProteinID:
XP_049581763
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Position
7:14488790..14648467
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AA seq
340 aa
AA seq
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MEGAGSQVTSANPINPQHDPGKMFIGGLSWQTSPDSLKHYFNTFGEIRECMVMRDPTTKR
SRGFGFITFADSASVDNVLAQPHHELDSKMIDPKVAFPRRTQPKMVTRTKKIFVGGISAN
TIIEDVKHYFEQFGKVEDAMLMFDKTTSRHRGFGFVTFENEDLAEKVCDIHYHEINNKMV
ECKKAQPKEVMYPPGTQGRVRGLQYTMDAFMLGMGMLSYPNIIATYGRGYCGFAPSYSYQ
FPGFPATAYGPVTATVAATHGSGRGRRGRGVSYMAYRHNTGAGKCSVSYMAYRHNTGAGK
CSVCILCGLPHSPCIFSCFVIVSSLQFNTQMIHTMYNTYK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagggagccggtagccaagtcacgtctgcaaacccgatcaatccgcaacacgacccg
ggaaaaatgtttatcggtgggctcagctggcaaacatcaccagacagccttaaacattat
tttaatacatttggggaaatcagagaatgtatggtaatgagagacccaacaacaaaacgt
tccaggggatttggcttcatcacttttgcagattctgccagcgtagataacgtcttggca
cagccgcatcatgagttagactctaaaatgattgacccaaaagttgcctttcccagacgt
actcaacccaagatggtaacaagaacaaagaagatttttgtgggaggaatatcagccaac
acgataattgaggatgtgaagcattactttgaacaatttggcaaggtagaagatgccatg
ctaatgtttgacaaaacaactagtcgacatagaggttttggatttgtaacatttgaaaac
gaagatctagcggagaaagtctgtgacatccattatcatgaaataaataataaaatggta
gaatgcaaaaaagcccaaccaaaagaagtaatgtacccacctgggacacagggtcgggtt
agaggtctgcagtatacaatggatgctttcatgcttggtatgggtatgctgagttatcca
aatattatagcgacatatggcagaggatactgtggttttgcaccaagttatagttaccaa
ttcccaggctttccagcaacagcgtatggaccagtgacagcaacagtagcagcaacacat
ggctcaggtcggggaaggcgtggaagaggtgtcagctacatggcatataggcacaacaca
ggggcaggtaaatgctctgtcagctacatggcatacaggcacaacacaggggcaggtaaa
tgctctgtctgtattctgtgtggcctgccacactcgccatgcattttctcttgtttcgtc
atcgtgtcatctcttcagtttaacacccaaatgattcacactatgtacaatacttacaaa
tga
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