KEGG   Syngnathus scovelli (Gulf pipefish): 125972264
Entry
125972264         CDS       T08785                                 
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
  KO
K05450  platelet derived growth factor C/D
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010  MAPK signaling pathway
sscv04020  Calcium signaling pathway
sscv04510  Focal adhesion
sscv04540  Gap junction
sscv04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125972264 (pdgfd)
   04020 Calcium signaling pathway
    125972264 (pdgfd)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125972264 (pdgfd)
   04540 Gap junction
    125972264 (pdgfd)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125972264 (pdgfd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:sscv04052]
    125972264 (pdgfd)
Cytokines and neuropeptides [BR:sscv04052]
 Cytokines
  Growth factors (RTK binding)
   125972264 (pdgfd)
SSDB
Motif
Pfam: CUB PDGF flgK_1st_1
Other DBs
NCBI-GeneID: 125972264
NCBI-ProteinID: XP_049581858
LinkDB
Position
7:12305944..12334578
AA seq 368 aa
MSGAVVFHMCVALLLLLGAGAVARAQVSMVKVIRGNFRRDDVYRKEDNITVTPPGGVINS
PRFPNSYPRNLLLSWTLVSPAGSRIHLEFDNHFGLEEAENNVCRYDFVEVEDQSETSTII
WGRWCGQKAPPSLNSKSNILKITFKSDNYFVAKPGFKVYYSFLPDTPLPASQTNWEVVTT
SDRSPVGPAAVTEVSLSLDDLDRTIAAFDTVEQLLRSLNPDTWKQDLDSIYTQTHIHYRS
RAYHLASRHNKVDLDRLYDDVKRYSCTPRNYSVNLREELRVTNAVFFPRCMLVKRCGGNC
GCGTNNWNTGCTCQASKTTLKLHEVLKYAPETTLYQRHRRTRVRWVIDEIFLTHHDKCEC
ACPSQPPR
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtggagcggtagttttccacatgtgcgtggcgcttttattactgctgggcgcagga
gcagttgcgagagctcaggtttccatggtcaaagtcatacggggcaacttcaggagagac
gatgtataccgaaaagaggacaatatcaccgttacaccgccaggtggagtcatcaatagc
ccacgcttccccaactcgtatccccgcaatctgcttttgtcatggactttggtgtcacca
gcgggaagccggatacacctggagtttgacaatcattttggcttggaggaggccgagaac
aacgtgtgcagatatgactttgttgaagtggaggaccaatcagagaccagcactattatt
tggggtcgctggtgtggacagaaggcaccgccgagtctcaactccaaatctaacatcctc
aaaataaccttcaaatctgacaattattttgtcgcaaagccgggattcaaagtctactat
tcatttctgcctgacacccctctgcctgcatcccaaaccaactgggaggttgtcaccacg
tcggatcgcagtcctgtggggccggcagcagtcactgaagtatcgctctcattagatgac
ctggaccgaaccatcgctgcctttgacacagtggaacagcttctgagatcgctgaacccg
gacacttggaaacaggacctggacagcatttacacacaaacgcatattcattatagatcc
agggcttatcatctggcaagcaggcacaacaaagttgacctggatcgcctctacgatgac
gtaaagcggtacagctgcacccctcgcaactactctgtcaacctgcgtgaggagcttagg
gttaccaacgccgtcttcttcccccggtgcatgctggtcaagcgctgtggtggcaactgt
ggatgcggcacaaataactggaataccggctgcacctgtcaggcctcgaagacaacgctc
aaactacatgaggtgctcaagtacgccccggagaccactctgtaccagcgccatcgcagg
acaagggtgcgctgggtcatcgatgagatattcctcacacatcatgacaagtgtgaatgt
gcctgtccctcgcagcctcctcgctga

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