Syngnathus scovelli (Gulf pipefish): 125972264
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Entry
125972264 CDS
T08785
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
sscv04510
Focal adhesion
sscv04540
Gap junction
sscv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125972264 (pdgfd)
04020 Calcium signaling pathway
125972264 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125972264 (pdgfd)
04540 Gap junction
125972264 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125972264 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125972264 (pdgfd)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Growth factors (RTK binding)
125972264 (pdgfd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
flgK_1st_1
Motif
Other DBs
NCBI-GeneID:
125972264
NCBI-ProteinID:
XP_049581858
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All DBs
Position
7:12305944..12334578
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AA seq
368 aa
AA seq
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MSGAVVFHMCVALLLLLGAGAVARAQVSMVKVIRGNFRRDDVYRKEDNITVTPPGGVINS
PRFPNSYPRNLLLSWTLVSPAGSRIHLEFDNHFGLEEAENNVCRYDFVEVEDQSETSTII
WGRWCGQKAPPSLNSKSNILKITFKSDNYFVAKPGFKVYYSFLPDTPLPASQTNWEVVTT
SDRSPVGPAAVTEVSLSLDDLDRTIAAFDTVEQLLRSLNPDTWKQDLDSIYTQTHIHYRS
RAYHLASRHNKVDLDRLYDDVKRYSCTPRNYSVNLREELRVTNAVFFPRCMLVKRCGGNC
GCGTNNWNTGCTCQASKTTLKLHEVLKYAPETTLYQRHRRTRVRWVIDEIFLTHHDKCEC
ACPSQPPR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagcggtagttttccacatgtgcgtggcgcttttattactgctgggcgcagga
gcagttgcgagagctcaggtttccatggtcaaagtcatacggggcaacttcaggagagac
gatgtataccgaaaagaggacaatatcaccgttacaccgccaggtggagtcatcaatagc
ccacgcttccccaactcgtatccccgcaatctgcttttgtcatggactttggtgtcacca
gcgggaagccggatacacctggagtttgacaatcattttggcttggaggaggccgagaac
aacgtgtgcagatatgactttgttgaagtggaggaccaatcagagaccagcactattatt
tggggtcgctggtgtggacagaaggcaccgccgagtctcaactccaaatctaacatcctc
aaaataaccttcaaatctgacaattattttgtcgcaaagccgggattcaaagtctactat
tcatttctgcctgacacccctctgcctgcatcccaaaccaactgggaggttgtcaccacg
tcggatcgcagtcctgtggggccggcagcagtcactgaagtatcgctctcattagatgac
ctggaccgaaccatcgctgcctttgacacagtggaacagcttctgagatcgctgaacccg
gacacttggaaacaggacctggacagcatttacacacaaacgcatattcattatagatcc
agggcttatcatctggcaagcaggcacaacaaagttgacctggatcgcctctacgatgac
gtaaagcggtacagctgcacccctcgcaactactctgtcaacctgcgtgaggagcttagg
gttaccaacgccgtcttcttcccccggtgcatgctggtcaagcgctgtggtggcaactgt
ggatgcggcacaaataactggaataccggctgcacctgtcaggcctcgaagacaacgctc
aaactacatgaggtgctcaagtacgccccggagaccactctgtaccagcgccatcgcagg
acaagggtgcgctgggtcatcgatgagatattcctcacacatcatgacaagtgtgaatgt
gcctgtccctcgcagcctcctcgctga
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