Syngnathus scovelli (Gulf pipefish): 125972365
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Entry
125972365 CDS
T08785
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125972365 (rnf169)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125972365 (rnf169)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125972365 (rnf169)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125972365 (rnf169)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
125972365 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
125972365
NCBI-ProteinID:
XP_049581971
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Position
7:complement(56485..59234)
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AA seq
570 aa
AA seq
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MAAAVTGRRSGKAAAAAAEAAHTAADPVAARASPVLGTASGIHRSSEPGRRSCSARWRRS
TEAKRKGGGGGAAGRVAAAADARARPSDVFVCPSAVHKSTEGSSSGPNLTRKVSPSQSPV
RPVAVLSLFFFFPCCVAYVANGCVSVNVFFLMELSMCEEREDVRRRGLRKDESGSPQRGQ
DSGVLSDSENEEPVSRRIRRFSAFVRRSRTMSGVASGVQRSRSCTEAGDNARGKTKGDAD
AVWLARPQVPSESAQDLASCRECQAGAAHSSTAGILLSSENSRSASAPVGGPDRRPARRG
GVAPPPATAAPPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLADGRLLEPAVVKSTP
RNLTWRLHKPTSYEASPAVLQRWRQIELDRQSFKVNSKGTLTSPVTDTPEAGGASNNKRK
LLFDPPGPDGRSLKIRVPAVHYCGDFASRGGDAELESGAGVGALFGRRHSFSPYARGSSF
QSCKLAAKGSLSPRKETAASKRSRKTKHQDAAAPRVCQERKDRAFALKLQRQFERERAPP
GDKYFLRSWMANHSRRRLGLRRSRRINQQR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggtgactggccgacgctccggaaaggctgcggcagcggcggcggaggcg
gcgcacacggcggcggatccggtggcggcccgggcatctcctgtactcggaaccgcgtcg
ggaatccaccgcagcagcgagcccggtcgccgctcctgctcggcccggtggcgccggagc
acagaggccaagcggaaaggcggcggcggcggggcggccggcagggtcgcggcggcggcg
gacgcccgcgcgcggccatcagacgtgtttgtgtgtccgagcgccgtgcacaagtcaact
gagggctcgtcttcaggtcccaacctgacgcgcaaggtgagtccgagtcaaagtccggtg
agacccgtggccgttctttcgttattttttttttttccctgctgcgtcgcgtacgtcgca
aacgggtgcgtaagcgtcaatgttttctttttgatggagctgtccatgtgcgaggagcgg
gaagacgtgaggaggcgcggcctccgcaaggacgaaagcggctcgccccaacgcggccaa
gattcgggcgtcctgtctgactcggagaacgaggagcccgtgtccaggcgcatcaggagg
ttctcggcctttgtgagaaggagccggactatgtcgggcgtcgccagcggcgtgcagagg
agtcgcagctgcacggaagccggcgacaacgcgcggggaaaaaccaagggggacgccgac
gcggtttggctcgctcgcccccaagtgccatcggagtccgctcaagacctggcttcctgc
cgcgaatgtcaggcgggggcggctcacagctccacggccggaatcctcctgtcgtcagag
aacagtcggtcggcctcggcgcccgtcggcggccccgaccggcggccggcgcggcgcggc
ggcgtggccccgccgccggcgaccgccgcgccgcccgagcgctcggtcagccccgagagc
aacgacagcatctcggaagagctcaaccattttaagcccatcgtgtgctcgccctgcacg
ccgcccaaacggctggcggacgggcgcctgctggagcccgccgtggtcaagtccacgccc
cggaacctgacgtggcgcctgcacaagcccaccagctacgaggccagccccgccgtgctg
cagcgctggcggcagatcgagctggaccgccagagctttaaggtgaactccaaggggacg
ctgaccagccccgtcacggacacgccggaggccggcggcgcttccaacaacaagcggaag
ctgctcttcgatcctcctggcccggatggccgctccctcaagatccgcgtgcccgccgtc
cactactgcggcgactttgcctcacgcggcggcgatgctgaactggagtcgggggccggc
gtcggcgccttgtttggacgcagacattccttctccccgtacgcccgtggctcaagcttc
cagtcgtgcaagctggcggcaaagggctcgttgagcccccgcaaggaaacggctgcctcc
aagcgaagcagaaagaccaaacaccaggacgccgccgccccccgagtctgccaggagagg
aaggaccgggctttcgccctcaagctgcaaagacagtttgagagggagcgcgcccccccg
ggggacaagtatttcctacgctcctggatggccaatcacagccgcaggaggctcggcctg
cgacgttcgcgccgtattaaccagcagcgttag
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