Syngnathus scovelli (Gulf pipefish): 125972405
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Entry
125972405 CDS
T08785
Name
(RefSeq) F-box only protein 40 isoform X1
KO
K10315
F-box protein 40
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125972405
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125972405
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GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Sina_ZnF
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
125972405
NCBI-ProteinID:
XP_049582026
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Position
7:complement(4115698..4119076)
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AA seq
636 aa
AA seq
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MLTFRRMPAVRHEHCERCYAIRCPAPSWLSLGCAVVRCPNDCGAFLHACKDDEHRLLCPN
ETVPCLNADYGCPLSMPRHRRARHLEACPASVVGCSQEWNRWPVPDNDLTFYRNVSQESQ
QQLDVALALRDQELLFKSIKMKSVFPELTDPEDIDVGVAREDLCSASAGDTLTVCAKMME
EEPSDELERESLQKYSSWERIVKKEMNGEQTNKNAAKTEESGKKMEAVRESSSCENRTSG
LAPWQDGVLEKLGKEANIGEYNMYLVHNGAMLINFGQLAACTPREKDFVYGSLEPIEVKS
VRSFNVPSSYRAKRWHLKDPNRKIEVAHRSTDTVDLDVSFEELPKCEEVSVTLLCCLEKE
FKGHQISESTGLDGLYVNVGTQTYNLDGAPFQAEASLADAVAGKAPCLRVRTQTESVTRR
HNRTSSVFSYTCGLFFRRDEYPSHFRNVHSEIQAGLGDWFLQRCPLAYLGCTFAQTRFRP
DGQPAEVKYHHGVDKMVIRPDVPRELLEGTKASDRLSHLPVEILRHVAGYLDSFALSQLS
QVSRPMREVCGTLLQSRGMVSLKWEKKTYSHGGSSWKSRKKVWEFSSLFCPVERWHLSDS
PSVAVHLRTCPYYQTERRTEPVALSGLLEVCTEEDH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgttcaggaggatgccagcggtccgccacgagcactgcgagcgctgctacgct
atccgctgcccggcgccgtcgtggctctccctgggctgcgcggtggtccgctgccccaac
gactgcggcgccttccttcacgcctgcaaagacgacgagcaccgccttctgtgccccaac
gagacggttccttgcctcaacgccgactacggctgcccgttgagcatgccgcggcatcgg
cgggcccgccacctggaggcgtgtcccgccagcgtggtcggctgctctcaggagtggaac
cgctggcctgttccggataatgacttgacgttctacaggaacgtgtcccaagaaagccaa
cagcagctcgatgtcgccttggcgctgagggatcaagagctgctgttcaagtccatcaag
atgaaaagcgttttcccggagttgacggatcccgaagatatcgacgttggggtcgcgagg
gaggatttatgttcggcttctgctggagatacactgactgtctgtgcaaagatgatggaa
gaggaaccgagtgatgagctggaaagggaaagtcttcagaagtacagctcctgggagaga
atagtcaagaaggagatgaacggagagcagaccaacaaaaatgcagctaaaacggaggag
agcgggaagaaaatggaggcggtgagagaaagttcctcatgcgagaacagaacatctggc
ctggcaccttggcaagatggcgtcttggagaagttaggcaaggaggccaacatcggcgag
tacaacatgtatctggtgcacaacggagccatgctcatcaacttcggacagctggccgcc
tgcaccccgagggagaaggactttgtttacgggagcctggaacccatcgaagtcaagtcc
gtccgctccttcaacgtccctagcagctaccgagccaagcgttggcacctgaaggacccc
aaccgcaaaatagaggtggcgcaccggagcaccgacacggtcgatctggacgtctcgttc
gaggagctcccgaagtgcgaggaggtaagcgtcacgttgctgtgctgtctggagaaagaa
ttcaaagggcatcagatctcggagagcaccggtttggacggtctctacgtcaacgtcggg
acgcaaacgtacaacttggacggcgcgccgttccaggccgaggcgtcgctcgcagacgcg
gtcgccggtaaagcgccgtgtctccgcgtccgtacgcaaaccgagtctgtgactagacga
cacaacaggaccagctcggtcttcagctacacgtgcggcctcttcttccgccgtgacgag
tacccctcgcacttccgcaacgtgcactccgaaatccaggccggcctcggcgactggttc
ctgcaacgttgccccctggcttacctcggctgcactttcgcccaaacgaggtttcgcccg
gacggccaaccggctgaggtcaaataccaccacggcgtggataagatggtcatccggcca
gacgtcccgcgggagctgctcgagggtaccaaagcgtcggatcgcttgagccacttgcct
gtggagatcctccggcacgtcgccggatacttggactcgttcgccttgtcgcaattgtca
caggtgtcgcgtccgatgagagaggtgtgcggcactttattgcagagccgagggatggtc
tccctcaagtgggagaagaagacgtattcccacggggggagctcctggaagagtcgtaag
aaagtttgggaattcagctcgctgttttgccccgtggagcgatggcacttgagcgactcg
ccctccgtggcggtgcacctccgaacgtgcccctactaccagacggagcggcgcacggag
cccgtggctttaagtggcctgctggaagtctgcacggaggaagatcattag
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